RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 SCAF11Q99590 1463 aaKnown RBP22.14■■□□□ 1.13
CDC42SE1-203ENST00000470278 SLC52A1Q9NWF4 448 aa22.11■■□□□ 1.13
CDC42SE1-203ENST00000470278 ADGRB3O60242 1522 aa22.11■■□□□ 1.13
CDC42SE1-203ENST00000470278 LTKP29376 864 aa22.09■■□□□ 1.13
CDC42SE1-203ENST00000470278 PIP4K2BP78356 416 aa22.08■■□□□ 1.13
CDC42SE1-203ENST00000470278 CLTCL1P53675 1640 aa22.08■■□□□ 1.13
CDC42SE1-203ENST00000470278 MYO5BQ9ULV0 1848 aa22.06■■□□□ 1.12
CDC42SE1-203ENST00000470278 TMEM131LA2VDJ0 1609 aa22.06■■□□□ 1.12
CDC42SE1-203ENST00000470278 TOM1O60784 492 aa22.04■■□□□ 1.12
CDC42SE1-203ENST00000470278 IDI1Q13907 227 aa22.04■■□□□ 1.12
CDC42SE1-203ENST00000470278 PCGF6Q9BYE7 350 aa22.04■■□□□ 1.12
CDC42SE1-203ENST00000470278 SCAF1Q9H7N4 1312 aaKnown RBP22.02■■□□□ 1.12
CDC42SE1-203ENST00000470278 KIF1BO60333 1816 aa22.01■■□□□ 1.11
CDC42SE1-203ENST00000470278 TMEM2Q9UHN6 1383 aa22■■□□□ 1.11
CDC42SE1-203ENST00000470278 CCDC144AA2RUR9 1427 aa22■■□□□ 1.11
CDC42SE1-203ENST00000470278 FOXD1Q16676 465 aa22■■□□□ 1.11
CDC42SE1-203ENST00000470278 ANKRD30BQ9BXX2 1392 aa21.99■■□□□ 1.11
CDC42SE1-203ENST00000470278 DHX57Q6P158 1386 aaKnown RBP21.98■■□□□ 1.11
CDC42SE1-203ENST00000470278 NWD1Q149M9 1564 aa21.97■■□□□ 1.11
CDC42SE1-203ENST00000470278 TXNDC2Q86VQ3 553 aa21.95■■□□□ 1.1
CDC42SE1-203ENST00000470278 ZFYVE9O95405 1425 aa21.93■■□□□ 1.1
CDC42SE1-203ENST00000470278 STAG3Q9UJ98 1225 aa21.93■■□□□ 1.1
CDC42SE1-203ENST00000470278 SPATA31E1Q6ZUB1 1445 aa21.91■■□□□ 1.1
CDC42SE1-203ENST00000470278 NEXMIFQ5QGS0 1516 aa21.89■■□□□ 1.09
CDC42SE1-203ENST00000470278 CHD2O14647 1828 aaKnown RBP21.89■■□□□ 1.09
CDC42SE1-203ENST00000470278 ROBO1Q9Y6N7 1651 aa21.88■■□□□ 1.09
CDC42SE1-203ENST00000470278 IFT172Q9UG01 1749 aa21.87■■□□□ 1.09
CDC42SE1-203ENST00000470278 RIMS2Q9UQ26 1411 aa21.87■■□□□ 1.09
CDC42SE1-203ENST00000470278 TMEM94Q12767 1356 aa21.86■■□□□ 1.09
CDC42SE1-203ENST00000470278 NKTRP30414 1462 aaKnown RBP21.85■■□□□ 1.09
CDC42SE1-203ENST00000470278 PPLO60437 1756 aa21.85■■□□□ 1.09
CDC42SE1-203ENST00000470278 CHGAP10645 457 aaKnown RBP21.85■■□□□ 1.09
CDC42SE1-203ENST00000470278 SENP3Q9H4L4 574 aaPredicted RBP21.84■■□□□ 1.09
CDC42SE1-203ENST00000470278 EID1Q9Y6B2 187 aa21.83■■□□□ 1.09
CDC42SE1-203ENST00000470278 FAM135BQ49AJ0 1406 aa21.82■■□□□ 1.08
CDC42SE1-203ENST00000470278 RPGRIP1LQ68CZ1 1315 aa21.81■■□□□ 1.08
CDC42SE1-203ENST00000470278 HDGFP51858 240 aaKnown RBP21.81■■□□□ 1.08
CDC42SE1-203ENST00000470278 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.81■■□□□ 1.08
CDC42SE1-203ENST00000470278 SLC26A8Q96RN1 970 aa21.81■■□□□ 1.08
CDC42SE1-203ENST00000470278 RGS17Q9UGC6 210 aaPredicted RBP21.81■■□□□ 1.08
CDC42SE1-203ENST00000470278 PLEKHG1Q9ULL1 1385 aa21.8■■□□□ 1.08
CDC42SE1-203ENST00000470278 KCNA6P17658 529 aa21.79■■□□□ 1.08
CDC42SE1-203ENST00000470278 RBM33Q96EV2 1170 aaKnown RBP21.79■■□□□ 1.08
CDC42SE1-203ENST00000470278 ZNF326Q5BKZ1 582 aaKnown RBP21.78■■□□□ 1.08
CDC42SE1-203ENST00000470278 SETBP1Q9Y6X0 1596 aa21.78■■□□□ 1.08
CDC42SE1-203ENST00000470278 DIP2AQ14689 1571 aa21.77■■□□□ 1.08
CDC42SE1-203ENST00000470278 MYOM2P54296 1465 aa21.77■■□□□ 1.07
CDC42SE1-203ENST00000470278 NRXN3Q9Y4C0 1643 aa21.76■■□□□ 1.07
CDC42SE1-203ENST00000470278 CLSPNQ9HAW4 1339 aa21.76■■□□□ 1.07
CDC42SE1-203ENST00000470278 ADAMTS13Q76LX8 1427 aa21.75■■□□□ 1.07
CDC42SE1-203ENST00000470278 PPP1R15AO75807 674 aaPredicted RBP21.74■■□□□ 1.07
CDC42SE1-203ENST00000470278 COL16A1Q07092 1604 aaPredicted RBP21.73■■□□□ 1.07
CDC42SE1-203ENST00000470278 NRXN1Q9ULB1 1477 aa21.73■■□□□ 1.07
CDC42SE1-203ENST00000470278 PHLPP1O60346 1717 aa21.72■■□□□ 1.07
CDC42SE1-203ENST00000470278 VGFO15240 615 aaPredicted RBP21.71■■□□□ 1.07
CDC42SE1-203ENST00000470278 RGL3Q3MIN7 710 aa21.71■■□□□ 1.07
CDC42SE1-203ENST00000470278 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.7■■□□□ 1.06
CDC42SE1-203ENST00000470278 SETD1AO15047 1707 aaKnown RBP21.69■■□□□ 1.06
CDC42SE1-203ENST00000470278 PROSER2Q86WR7 435 aaPredicted RBP21.69■■□□□ 1.06
CDC42SE1-203ENST00000470278 PHF23Q9BUL5 403 aaPredicted RBP21.69■■□□□ 1.06
CDC42SE1-203ENST00000470278 PIK3C2GO75747 1445 aa21.69■■□□□ 1.06
CDC42SE1-203ENST00000470278 NUTM2DQ5VT03 806 aaPredicted RBP21.68■■□□□ 1.06
CDC42SE1-203ENST00000470278 STAC3Q96MF2 364 aa21.68■■□□□ 1.06
CDC42SE1-203ENST00000470278 LAMC1P11047 1609 aa21.68■■□□□ 1.06
CDC42SE1-203ENST00000470278 XRN1Q8IZH2 1706 aaKnown RBP21.67■■□□□ 1.06
CDC42SE1-203ENST00000470278 SIN3AQ96ST3 1273 aa21.67■■□□□ 1.06
CDC42SE1-203ENST00000470278 PTPRUQ92729 1446 aa21.65■■□□□ 1.06
CDC42SE1-203ENST00000470278 PIK3R4Q99570 1358 aa21.64■■□□□ 1.06
CDC42SE1-203ENST00000470278 ADGRF5Q8IZF2 1346 aa21.64■■□□□ 1.05
CDC42SE1-203ENST00000470278 MSH6P52701 1360 aa21.63■■□□□ 1.05
CDC42SE1-203ENST00000470278 TBX22Q9Y458 520 aa21.63■■□□□ 1.05
CDC42SE1-203ENST00000470278 POTEAQ6S8J7 498 aa21.62■■□□□ 1.05
CDC42SE1-203ENST00000470278 AHDC1Q5TGY3 1603 aaPredicted RBP21.62■■□□□ 1.05
CDC42SE1-203ENST00000470278 DCAF11Q8TEB1 546 aa21.61■■□□□ 1.05
CDC42SE1-203ENST00000470278 LRP6O75581 1613 aa21.61■■□□□ 1.05
CDC42SE1-203ENST00000470278 NEUROD1Q13562 356 aa21.6■■□□□ 1.05
CDC42SE1-203ENST00000470278 CCER1Q8TC90 406 aaPredicted RBP21.6■■□□□ 1.05
CDC42SE1-203ENST00000470278 BCANQ96GW7 911 aa21.6■■□□□ 1.05
CDC42SE1-203ENST00000470278 KIAA1210Q9ULL0 1709 aa21.59■■□□□ 1.05
CDC42SE1-203ENST00000470278 NCOA3Q9Y6Q9 1424 aa21.59■■□□□ 1.05
CDC42SE1-203ENST00000470278 SHPRHQ149N8 1683 aa21.59■■□□□ 1.05
CDC42SE1-203ENST00000470278 PRAG1Q86YV5 1406 aa21.58■■□□□ 1.05
CDC42SE1-203ENST00000470278 SLAIN2Q9P270 581 aa21.58■■□□□ 1.05
CDC42SE1-203ENST00000470278 TONSLQ96HA7 1378 aa21.58■■□□□ 1.04
CDC42SE1-203ENST00000470278 ASXL1Q8IXJ9 1541 aa21.57■■□□□ 1.04
CDC42SE1-203ENST00000470278 L3MBTL2Q969R5 705 aa21.57■■□□□ 1.04
CDC42SE1-203ENST00000470278 METP08581 1390 aa21.55■■□□□ 1.04
CDC42SE1-203ENST00000470278 NALCNQ8IZF0 1738 aa21.54■■□□□ 1.04
CDC42SE1-203ENST00000470278 ADGRB1O14514 1584 aa21.53■■□□□ 1.04
CDC42SE1-203ENST00000470278 KNDC1Q76NI1 1749 aa21.53■■□□□ 1.04
CDC42SE1-203ENST00000470278 C14orf93Q9H972 538 aaKnown RBP21.53■■□□□ 1.04
CDC42SE1-203ENST00000470278 TIMELESSQ9UNS1 1208 aa21.53■■□□□ 1.04
CDC42SE1-203ENST00000470278 NHSL1Q5SYE7 1610 aa21.53■■□□□ 1.04
CDC42SE1-203ENST00000470278 JCADQ9P266 1359 aa21.52■■□□□ 1.04
CDC42SE1-203ENST00000470278 KDM2AQ9Y2K7 1162 aa21.52■■□□□ 1.04
CDC42SE1-203ENST00000470278 TRPM1Q7Z4N2 1603 aa21.51■■□□□ 1.03
CDC42SE1-203ENST00000470278 PTCH1Q13635 1447 aa21.5■■□□□ 1.03
CDC42SE1-203ENST00000470278 TECPR2O15040 1411 aa21.49■■□□□ 1.03
CDC42SE1-203ENST00000470278 DCCP43146 1447 aa21.47■■□□□ 1.03
CDC42SE1-203ENST00000470278 CFAP70Q5T0N1 1121 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 151.4 ms