RNA–Protein interactions for RNA: ENST00000468676.5

TMEM39A-205, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-205ENST00000468676 FOXD1Q16676 465 aa21.85■■□□□ 1.09
TMEM39A-205ENST00000468676 CERKQ8TCT0 537 aa21.85■■□□□ 1.09
TMEM39A-205ENST00000468676 ZNF335Q9H4Z2 1342 aaPredicted RBP21.84■■□□□ 1.09
TMEM39A-205ENST00000468676 PPP1R15AO75807 674 aaPredicted RBP21.84■■□□□ 1.09
TMEM39A-205ENST00000468676 SENP3Q9H4L4 574 aaPredicted RBP21.83■■□□□ 1.09
TMEM39A-205ENST00000468676 LTBP4Q8N2S1 1624 aa21.83■■□□□ 1.08
TMEM39A-205ENST00000468676 CCDC144AA2RUR9 1427 aa21.82■■□□□ 1.08
TMEM39A-205ENST00000468676 TRIM26Q12899 539 aaPredicted RBP21.82■■□□□ 1.08
TMEM39A-205ENST00000468676 ZNF326Q5BKZ1 582 aaKnown RBP21.82■■□□□ 1.08
TMEM39A-205ENST00000468676 PLEKHG1Q9ULL1 1385 aa21.81■■□□□ 1.08
TMEM39A-205ENST00000468676 BCANQ96GW7 911 aa21.8■■□□□ 1.08
TMEM39A-205ENST00000468676 RPGRIP1LQ68CZ1 1315 aa21.78■■□□□ 1.08
TMEM39A-205ENST00000468676 CPS1P31327 1500 aa21.77■■□□□ 1.08
TMEM39A-205ENST00000468676 IQSEC2Q5JU85 1478 aa21.77■■□□□ 1.07
TMEM39A-205ENST00000468676 SLC26A8Q96RN1 970 aa21.74■■□□□ 1.07
TMEM39A-205ENST00000468676 TBX22Q9Y458 520 aa21.74■■□□□ 1.07
TMEM39A-205ENST00000468676 NUTM2DQ5VT03 806 aaPredicted RBP21.73■■□□□ 1.07
TMEM39A-205ENST00000468676 FBXO41Q8TF61 875 aa21.73■■□□□ 1.07
TMEM39A-205ENST00000468676 NEXMIFQ5QGS0 1516 aa21.72■■□□□ 1.07
TMEM39A-205ENST00000468676 VGFO15240 615 aaPredicted RBP21.72■■□□□ 1.07
TMEM39A-205ENST00000468676 ANKRD30BQ9BXX2 1392 aa21.72■■□□□ 1.07
TMEM39A-205ENST00000468676 DIP2AQ14689 1571 aa21.7■■□□□ 1.06
TMEM39A-205ENST00000468676 SPATA31E1Q6ZUB1 1445 aa21.7■■□□□ 1.06
TMEM39A-205ENST00000468676 KCNA6P17658 529 aa21.69■■□□□ 1.06
TMEM39A-205ENST00000468676 STRCP1A6NGW2 1772 aa21.67■■□□□ 1.06
TMEM39A-205ENST00000468676 SETBP1Q9Y6X0 1596 aa21.67■■□□□ 1.06
TMEM39A-205ENST00000468676 ADAMTS13Q76LX8 1427 aa21.67■■□□□ 1.06
TMEM39A-205ENST00000468676 PIK3R4Q99570 1358 aa21.67■■□□□ 1.06
TMEM39A-205ENST00000468676 RGL3Q3MIN7 710 aa21.66■■□□□ 1.06
TMEM39A-205ENST00000468676 PPLO60437 1756 aa21.66■■□□□ 1.06
TMEM39A-205ENST00000468676 CHD2O14647 1828 aaKnown RBP21.64■■□□□ 1.05
TMEM39A-205ENST00000468676 ILDR1Q86SU0 546 aaPredicted RBP21.63■■□□□ 1.05
TMEM39A-205ENST00000468676 LRRC7Q96NW7 1537 aa21.63■■□□□ 1.05
TMEM39A-205ENST00000468676 NWD1Q149M9 1564 aa21.62■■□□□ 1.05
TMEM39A-205ENST00000468676 NKTRP30414 1462 aaKnown RBP21.62■■□□□ 1.05
TMEM39A-205ENST00000468676 NRXN3Q9Y4C0 1643 aa21.62■■□□□ 1.05
TMEM39A-205ENST00000468676 PROSER2Q86WR7 435 aaPredicted RBP21.59■■□□□ 1.05
TMEM39A-205ENST00000468676 IFT172Q9UG01 1749 aa21.59■■□□□ 1.05
TMEM39A-205ENST00000468676 UBAP1LF5GYI3 381 aa21.57■■□□□ 1.04
TMEM39A-205ENST00000468676 TOM1O60784 492 aa21.56■■□□□ 1.04
TMEM39A-205ENST00000468676 STAC3Q96MF2 364 aa21.56■■□□□ 1.04
TMEM39A-205ENST00000468676 ADGRF5Q8IZF2 1346 aa21.55■■□□□ 1.04
TMEM39A-205ENST00000468676 AMOTL2Q9Y2J4 779 aa21.55■■□□□ 1.04
TMEM39A-205ENST00000468676 METP08581 1390 aa21.54■■□□□ 1.04
TMEM39A-205ENST00000468676 TMEM94Q12767 1356 aa21.54■■□□□ 1.04
TMEM39A-205ENST00000468676 ALKQ9UM73 1620 aa21.54■■□□□ 1.04
TMEM39A-205ENST00000468676 PHF23Q9BUL5 403 aaPredicted RBP21.53■■□□□ 1.04
TMEM39A-205ENST00000468676 NCOA3Q9Y6Q9 1424 aa21.53■■□□□ 1.04
TMEM39A-205ENST00000468676 MYOM2P54296 1465 aa21.52■■□□□ 1.04
TMEM39A-205ENST00000468676 PTPRUQ92729 1446 aa21.52■■□□□ 1.04
TMEM39A-205ENST00000468676 XIRP1Q702N8 1843 aaKnown RBP21.52■■□□□ 1.04
TMEM39A-205ENST00000468676 PIK3C2GO75747 1445 aa21.5■■□□□ 1.03
TMEM39A-205ENST00000468676 DHX57Q6P158 1386 aaKnown RBP21.49■■□□□ 1.03
TMEM39A-205ENST00000468676 SETD1AO15047 1707 aaKnown RBP21.49■■□□□ 1.03
TMEM39A-205ENST00000468676 NRXN1Q9ULB1 1477 aa21.49■■□□□ 1.03
TMEM39A-205ENST00000468676 XRN1Q8IZH2 1706 aaKnown RBP21.49■■□□□ 1.03
TMEM39A-205ENST00000468676 DCAF11Q8TEB1 546 aa21.48■■□□□ 1.03
TMEM39A-205ENST00000468676 MSH6P52701 1360 aa21.47■■□□□ 1.03
TMEM39A-205ENST00000468676 C14orf93Q9H972 538 aaKnown RBP21.46■■□□□ 1.03
TMEM39A-205ENST00000468676 RBM33Q96EV2 1170 aaKnown RBP21.45■■□□□ 1.02
TMEM39A-205ENST00000468676 PRAG1Q86YV5 1406 aa21.45■■□□□ 1.02
TMEM39A-205ENST00000468676 LAMC1P11047 1609 aa21.44■■□□□ 1.02
TMEM39A-205ENST00000468676 C14orf37Q86TY3 774 aa21.44■■□□□ 1.02
TMEM39A-205ENST00000468676 KDM2AQ9Y2K7 1162 aa21.44■■□□□ 1.02
TMEM39A-205ENST00000468676 C19orf44Q9H6X5 657 aa21.43■■□□□ 1.02
TMEM39A-205ENST00000468676 PIP4K2BP78356 416 aa21.42■■□□□ 1.02
TMEM39A-205ENST00000468676 PTCH1Q13635 1447 aa21.42■■□□□ 1.02
TMEM39A-205ENST00000468676 PCGF6Q9BYE7 350 aa21.42■■□□□ 1.02
TMEM39A-205ENST00000468676 SCAF1Q9H7N4 1312 aaKnown RBP21.41■■□□□ 1.02
TMEM39A-205ENST00000468676 CFAP70Q5T0N1 1121 aa21.4■■□□□ 1.02
TMEM39A-205ENST00000468676 LRPPRCP42704 1394 aaKnown RBP21.39■■□□□ 1.02
TMEM39A-205ENST00000468676 CADPS2Q86UW7 1296 aa21.39■■□□□ 1.01
TMEM39A-205ENST00000468676 ABCC11Q96J66 1382 aa21.38■■□□□ 1.01
TMEM39A-205ENST00000468676 ATF3P18847 181 aa21.38■■□□□ 1.01
TMEM39A-205ENST00000468676 TMEM132EQ6IEE7 984 aa21.38■■□□□ 1.01
TMEM39A-205ENST00000468676 SIN3AQ96ST3 1273 aa21.38■■□□□ 1.01
TMEM39A-205ENST00000468676 TECPR2O15040 1411 aa21.37■■□□□ 1.01
TMEM39A-205ENST00000468676 DCCP43146 1447 aa21.37■■□□□ 1.01
TMEM39A-205ENST00000468676 ROBO2Q9HCK4 1378 aa21.36■■□□□ 1.01
TMEM39A-205ENST00000468676 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.36■■□□□ 1.01
TMEM39A-205ENST00000468676 NEUROD1Q13562 356 aa21.36■■□□□ 1.01
TMEM39A-205ENST00000468676 STK26Q9P289 416 aa21.36■■□□□ 1.01
TMEM39A-205ENST00000468676 YTHDC2Q9H6S0 1430 aaKnown RBP21.36■■□□□ 1.01
TMEM39A-205ENST00000468676 SIRT1Q96EB6 747 aa21.35■■□□□ 1.01
TMEM39A-205ENST00000468676 SLAIN2Q9P270 581 aa21.35■■□□□ 1.01
TMEM39A-205ENST00000468676 ASXL1Q8IXJ9 1541 aa21.34■■□□□ 1.01
TMEM39A-205ENST00000468676 FAM135BQ49AJ0 1406 aa21.34■■□□□ 1.01
TMEM39A-205ENST00000468676 ADGRL3Q9HAR2 1447 aa21.34■■□□□ 1.01
TMEM39A-205ENST00000468676 KNDC1Q76NI1 1749 aa21.34■■□□□ 1.01
TMEM39A-205ENST00000468676 L3MBTL2Q969R5 705 aa21.33■■□□□ 1.01
TMEM39A-205ENST00000468676 KIAA1210Q9ULL0 1709 aa21.29■■□□□ 1
TMEM39A-205ENST00000468676 ADGRB1O14514 1584 aa21.29■■□□□ 1
TMEM39A-205ENST00000468676 NALCNQ8IZF0 1738 aa21.28■■□□□ 1
TMEM39A-205ENST00000468676 HSPA1LP34931 641 aa21.27■■□□□ 1
TMEM39A-205ENST00000468676 WAPLQ7Z5K2 1190 aa21.27■■□□□ 1
TMEM39A-205ENST00000468676 DLC1Q96QB1 1528 aa21.26■□□□□ 0.99
TMEM39A-205ENST00000468676 CLSPNQ9HAW4 1339 aa21.26■□□□□ 0.99
TMEM39A-205ENST00000468676 ROBO1Q9Y6N7 1651 aa21.25■□□□□ 0.99
TMEM39A-205ENST00000468676 TONSLQ96HA7 1378 aa21.24■□□□□ 0.99
TMEM39A-205ENST00000468676 PRAM1Q96QH2 718 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms