RNA–Protein interactions for RNA: ENST00000467515.1

EPHB4-203, Transcript of EPH receptor B4, humanhuman

TSL 2

Gene EPHB4, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-203ENST00000467515 TMEM2Q9UHN6 1383 aa23.73■■□□□ 1.39
EPHB4-203ENST00000467515 ZNF326Q5BKZ1 582 aaKnown RBP23.72■■□□□ 1.39
EPHB4-203ENST00000467515 ZFYVE9O95405 1425 aa23.72■■□□□ 1.39
EPHB4-203ENST00000467515 L3MBTL2Q969R5 705 aa23.71■■□□□ 1.39
EPHB4-203ENST00000467515 RIMS2Q9UQ26 1411 aa23.7■■□□□ 1.38
EPHB4-203ENST00000467515 MYOM2P54296 1465 aa23.68■■□□□ 1.38
EPHB4-203ENST00000467515 STAC3Q96MF2 364 aa23.67■■□□□ 1.38
EPHB4-203ENST00000467515 DCAF11Q8TEB1 546 aa23.66■■□□□ 1.38
EPHB4-203ENST00000467515 POLR1AO95602 1720 aaPredicted RBP23.66■■□□□ 1.38
EPHB4-203ENST00000467515 HDGFP51858 240 aaKnown RBP23.64■■□□□ 1.37
EPHB4-203ENST00000467515 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.64■■□□□ 1.37
EPHB4-203ENST00000467515 NRXN1Q9ULB1 1477 aa23.63■■□□□ 1.37
EPHB4-203ENST00000467515 VGFO15240 615 aaPredicted RBP23.62■■□□□ 1.37
EPHB4-203ENST00000467515 LTKP29376 864 aa23.62■■□□□ 1.37
EPHB4-203ENST00000467515 SCAF11Q99590 1463 aaKnown RBP23.62■■□□□ 1.37
EPHB4-203ENST00000467515 NUTM2DQ5VT03 806 aaPredicted RBP23.6■■□□□ 1.37
EPHB4-203ENST00000467515 TXNDC2Q86VQ3 553 aa23.6■■□□□ 1.37
EPHB4-203ENST00000467515 KDM2AQ9Y2K7 1162 aa23.6■■□□□ 1.37
EPHB4-203ENST00000467515 EID1Q9Y6B2 187 aa23.6■■□□□ 1.37
EPHB4-203ENST00000467515 STRCQ7RTU9 1775 aa23.6■■□□□ 1.37
EPHB4-203ENST00000467515 ADGRF5Q8IZF2 1346 aa23.59■■□□□ 1.37
EPHB4-203ENST00000467515 PPP1R15AO75807 674 aaPredicted RBP23.59■■□□□ 1.37
EPHB4-203ENST00000467515 HSPA2P54652 639 aa23.59■■□□□ 1.37
EPHB4-203ENST00000467515 ANKLE2Q86XL3 938 aa23.59■■□□□ 1.37
EPHB4-203ENST00000467515 PRAG1Q86YV5 1406 aa23.58■■□□□ 1.36
EPHB4-203ENST00000467515 PLEKHG1Q9ULL1 1385 aa23.57■■□□□ 1.36
EPHB4-203ENST00000467515 NRXN3Q9Y4C0 1643 aa23.57■■□□□ 1.36
EPHB4-203ENST00000467515 PIK3C2GO75747 1445 aa23.57■■□□□ 1.36
EPHB4-203ENST00000467515 SETBP1Q9Y6X0 1596 aa23.57■■□□□ 1.36
EPHB4-203ENST00000467515 MED14O60244 1454 aa23.56■■□□□ 1.36
EPHB4-203ENST00000467515 IQGAP1P46940 1657 aa23.56■■□□□ 1.36
EPHB4-203ENST00000467515 KIAA1210Q9ULL0 1709 aa23.56■■□□□ 1.36
EPHB4-203ENST00000467515 ZEB1P37275 1124 aaPredicted RBP23.55■■□□□ 1.36
EPHB4-203ENST00000467515 SETD1AO15047 1707 aaKnown RBP23.53■■□□□ 1.36
EPHB4-203ENST00000467515 LAMC1P11047 1609 aa23.53■■□□□ 1.36
EPHB4-203ENST00000467515 TRPM1Q7Z4N2 1603 aa23.53■■□□□ 1.36
EPHB4-203ENST00000467515 NBPF8Q3BBV2 869 aa23.52■■□□□ 1.36
EPHB4-203ENST00000467515 PHF23Q9BUL5 403 aaPredicted RBP23.52■■□□□ 1.36
EPHB4-203ENST00000467515 NCKAP5LQ9HCH0 1330 aa23.52■■□□□ 1.36
EPHB4-203ENST00000467515 ALKQ9UM73 1620 aa23.51■■□□□ 1.35
EPHB4-203ENST00000467515 NPHP4O75161 1426 aaPredicted RBP23.5■■□□□ 1.35
EPHB4-203ENST00000467515 ADAMTS13Q76LX8 1427 aa23.49■■□□□ 1.35
EPHB4-203ENST00000467515 DIP2AQ14689 1571 aa23.48■■□□□ 1.35
EPHB4-203ENST00000467515 C14orf93Q9H972 538 aaKnown RBP23.48■■□□□ 1.35
EPHB4-203ENST00000467515 RALGAPBQ86X10 1494 aa23.45■■□□□ 1.34
EPHB4-203ENST00000467515 CFAP70Q5T0N1 1121 aa23.44■■□□□ 1.34
EPHB4-203ENST00000467515 TBX22Q9Y458 520 aa23.43■■□□□ 1.34
EPHB4-203ENST00000467515 BCANQ96GW7 911 aa23.42■■□□□ 1.34
EPHB4-203ENST00000467515 SENP3Q9H4L4 574 aaPredicted RBP23.42■■□□□ 1.34
EPHB4-203ENST00000467515 ADGRB1O14514 1584 aa23.42■■□□□ 1.34
EPHB4-203ENST00000467515 ASXL1Q8IXJ9 1541 aa23.42■■□□□ 1.34
EPHB4-203ENST00000467515 CHD2O14647 1828 aaKnown RBP23.4■■□□□ 1.34
EPHB4-203ENST00000467515 GPRASP1Q5JY77 1395 aa23.4■■□□□ 1.34
EPHB4-203ENST00000467515 NBPF1Q3BBV0 1214 aa23.39■■□□□ 1.33
EPHB4-203ENST00000467515 SLC26A8Q96RN1 970 aa23.39■■□□□ 1.33
EPHB4-203ENST00000467515 METP08581 1390 aa23.38■■□□□ 1.33
EPHB4-203ENST00000467515 ROCK2O75116 1388 aaKnown RBP23.37■■□□□ 1.33
EPHB4-203ENST00000467515 PIK3R4Q99570 1358 aa23.37■■□□□ 1.33
EPHB4-203ENST00000467515 DMRT2Q9Y5R5 561 aa23.36■■□□□ 1.33
EPHB4-203ENST00000467515 KNDC1Q76NI1 1749 aa23.34■■□□□ 1.33
EPHB4-203ENST00000467515 TMEM132EQ6IEE7 984 aa23.34■■□□□ 1.33
EPHB4-203ENST00000467515 XRN1Q8IZH2 1706 aaKnown RBP23.33■■□□□ 1.32
EPHB4-203ENST00000467515 PTPRUQ92729 1446 aa23.32■■□□□ 1.32
EPHB4-203ENST00000467515 YTHDC2Q9H6S0 1430 aaKnown RBP23.32■■□□□ 1.32
EPHB4-203ENST00000467515 NWD1Q149M9 1564 aa23.31■■□□□ 1.32
EPHB4-203ENST00000467515 LRPPRCP42704 1394 aaKnown RBP23.3■■□□□ 1.32
EPHB4-203ENST00000467515 CARD11Q9BXL7 1154 aa23.3■■□□□ 1.32
EPHB4-203ENST00000467515 STRCP1A6NGW2 1772 aa23.29■■□□□ 1.32
EPHB4-203ENST00000467515 ARHGEF28Q8N1W1 1705 aaKnown RBP23.29■■□□□ 1.32
EPHB4-203ENST00000467515 ABCC11Q96J66 1382 aa23.28■■□□□ 1.32
EPHB4-203ENST00000467515 TECPR2O15040 1411 aa23.28■■□□□ 1.32
EPHB4-203ENST00000467515 DLC1Q96QB1 1528 aa23.28■■□□□ 1.32
EPHB4-203ENST00000467515 CPS1P31327 1500 aa23.27■■□□□ 1.32
EPHB4-203ENST00000467515 KCNA6P17658 529 aa23.25■■□□□ 1.31
EPHB4-203ENST00000467515 AMOTL2Q9Y2J4 779 aa23.25■■□□□ 1.31
EPHB4-203ENST00000467515 SIRT1Q96EB6 747 aa23.23■■□□□ 1.31
EPHB4-203ENST00000467515 STK26Q9P289 416 aa23.23■■□□□ 1.31
EPHB4-203ENST00000467515 TRAK1Q9UPV9 953 aa23.22■■□□□ 1.31
EPHB4-203ENST00000467515 PTCH1Q13635 1447 aa23.22■■□□□ 1.31
EPHB4-203ENST00000467515 USP47Q96K76 1375 aa23.21■■□□□ 1.31
EPHB4-203ENST00000467515 NKTRP30414 1462 aaKnown RBP23.21■■□□□ 1.31
EPHB4-203ENST00000467515 FAM135BQ49AJ0 1406 aa23.2■■□□□ 1.3
EPHB4-203ENST00000467515 EIF3AQ14152 1382 aaKnown RBP23.19■■□□□ 1.3
EPHB4-203ENST00000467515 ROBO2Q9HCK4 1378 aa23.19■■□□□ 1.3
EPHB4-203ENST00000467515 ZNF335Q9H4Z2 1342 aaPredicted RBP23.17■■□□□ 1.3
EPHB4-203ENST00000467515 QRICH2Q9H0J4 1663 aa23.17■■□□□ 1.3
EPHB4-203ENST00000467515 EIF4G2P78344 907 aaKnown RBP eCLIP23.16■■□□□ 1.3
EPHB4-203ENST00000467515 XIRP1Q702N8 1843 aaKnown RBP23.15■■□□□ 1.3
EPHB4-203ENST00000467515 PRAM1Q96QH2 718 aa23.14■■□□□ 1.29
EPHB4-203ENST00000467515 PLEKHH1Q9ULM0 1364 aa23.14■■□□□ 1.29
EPHB4-203ENST00000467515 LTBP4Q8N2S1 1624 aa23.13■■□□□ 1.29
EPHB4-203ENST00000467515 HSPA5P11021 654 aaKnown RBP23.13■■□□□ 1.29
EPHB4-203ENST00000467515 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.13■■□□□ 1.29
EPHB4-203ENST00000467515 CENPJQ9HC77 1338 aaPredicted RBP23.12■■□□□ 1.29
EPHB4-203ENST00000467515 ST20-MTHFSA0A0A6YYL1 179 aa23.12■■□□□ 1.29
EPHB4-203ENST00000467515 WAPLQ7Z5K2 1190 aa23.12■■□□□ 1.29
EPHB4-203ENST00000467515 POGKQ9P215 609 aa23.11■■□□□ 1.29
EPHB4-203ENST00000467515 SBNO2Q9Y2G9 1366 aa23.1■■□□□ 1.29
EPHB4-203ENST00000467515 NCOA3Q9Y6Q9 1424 aa23.09■■□□□ 1.29
EPHB4-203ENST00000467515 LRRC7Q96NW7 1537 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms