RNA–Protein interactions for RNA: ENST00000467515.1

EPHB4-203, Transcript of EPH receptor B4, humanhuman

TSL 2

Gene EPHB4, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-203ENST00000467515 NISCHQ9Y2I1 1504 aa38.92■■■■□ 3.82
EPHB4-203ENST00000467515 CCDC180Q9P1Z9 1646 aa34.4■■■■□ 3.1
EPHB4-203ENST00000467515 ABCC9O60706 1549 aa32.99■■■□□ 2.87
EPHB4-203ENST00000467515 ZCCHC6Q5VYS8 1495 aaKnown RBP32.54■■■□□ 2.8
EPHB4-203ENST00000467515 DCAF1Q9Y4B6 1507 aa32.26■■■□□ 2.76
EPHB4-203ENST00000467515 MYO15BQ96JP2 1530 aa32.18■■■□□ 2.74
EPHB4-203ENST00000467515 NACADO15069 1562 aa32.16■■■□□ 2.74
EPHB4-203ENST00000467515 DCAF8L2P0C7V8 631 aa32.16■■■□□ 2.74
EPHB4-203ENST00000467515 RB1CC1Q8TDY2 1594 aa32.04■■■□□ 2.72
EPHB4-203ENST00000467515 UNC13AQ9UPW8 1703 aa31.44■■■□□ 2.62
EPHB4-203ENST00000467515 SCRIBQ14160 1630 aa31.36■■■□□ 2.61
EPHB4-203ENST00000467515 BICRAQ9NZM4 1560 aa31.09■■■□□ 2.57
EPHB4-203ENST00000467515 SHROOM4Q9ULL8 1493 aa31.01■■■□□ 2.55
EPHB4-203ENST00000467515 PABPN1Q86U42 306 aaKnown RBP eCLIP30.9■■■□□ 2.54
EPHB4-203ENST00000467515 CECR2Q9BXF3 1484 aa30.24■■■□□ 2.43
EPHB4-203ENST00000467515 EIF4G1Q04637 1599 aaKnown RBP30.19■■■□□ 2.42
EPHB4-203ENST00000467515 BAZ1AQ9NRL2 1556 aaPredicted RBP30.11■■■□□ 2.41
EPHB4-203ENST00000467515 SMARCA4P51532 1647 aa30.09■■■□□ 2.41
EPHB4-203ENST00000467515 MROH2BQ7Z745 1585 aa30■■■□□ 2.39
EPHB4-203ENST00000467515 CC2D2AQ9P2K1 1620 aa29.93■■■□□ 2.38
EPHB4-203ENST00000467515 RSF1Q96T23 1441 aaPredicted RBP29.86■■■□□ 2.37
EPHB4-203ENST00000467515 PEG3Q9GZU2 1588 aa29.81■■■□□ 2.36
EPHB4-203ENST00000467515 ATAD2BQ9ULI0 1458 aa29.75■■■□□ 2.35
EPHB4-203ENST00000467515 SMARCA2P51531 1590 aa29.75■■■□□ 2.35
EPHB4-203ENST00000467515 DNAJC5BQ9UF47 199 aa29.75■■■□□ 2.35
EPHB4-203ENST00000467515 WIZO95785 1651 aa29.73■■■□□ 2.35
EPHB4-203ENST00000467515 NCAPD3P42695 1498 aa29.66■■■□□ 2.34
EPHB4-203ENST00000467515 HMGXB3Q12766 1538 aa29.58■■■□□ 2.33
EPHB4-203ENST00000467515 BAZ1BQ9UIG0 1483 aaKnown RBP29.52■■■□□ 2.32
EPHB4-203ENST00000467515 SUPT5HO00267 1087 aaKnown RBP29.46■■■□□ 2.31
EPHB4-203ENST00000467515 TOP2AP11388 1531 aaKnown RBP29.43■■■□□ 2.3
EPHB4-203ENST00000467515 CCDC88BA6NC98 1476 aa29.07■■■□□ 2.24
EPHB4-203ENST00000467515 CADPSQ9ULU8 1353 aa28.8■■■□□ 2.2
EPHB4-203ENST00000467515 LAMC3Q9Y6N6 1575 aa28.79■■■□□ 2.2
EPHB4-203ENST00000467515 CFTRP13569 1480 aa28.78■■■□□ 2.2
EPHB4-203ENST00000467515 NESP48681 1621 aa28.75■■■□□ 2.19
EPHB4-203ENST00000467515 PRDM2Q13029 1718 aa28.72■■■□□ 2.19
EPHB4-203ENST00000467515 PDS5BQ9NTI5 1447 aa28.53■■■□□ 2.16
EPHB4-203ENST00000467515 KIF21AQ7Z4S6 1674 aa28.49■■■□□ 2.15
EPHB4-203ENST00000467515 FANCD2Q9BXW9 1451 aa28.46■■■□□ 2.15
EPHB4-203ENST00000467515 ERCC6Q03468 1493 aa28.37■■■□□ 2.13
EPHB4-203ENST00000467515 CEP164Q9UPV0 1460 aa28.37■■■□□ 2.13
EPHB4-203ENST00000467515 THOC2Q8NI27 1593 aaKnown RBP28.24■■■□□ 2.11
EPHB4-203ENST00000467515 MRC2Q9UBG0 1479 aa28.21■■■□□ 2.11
EPHB4-203ENST00000467515 ABCC8Q09428 1581 aa28.19■■■□□ 2.1
EPHB4-203ENST00000467515 URB2Q14146 1524 aaKnown RBP28.16■■■□□ 2.1
EPHB4-203ENST00000467515 WDR62O43379 1518 aa28.13■■■□□ 2.09
EPHB4-203ENST00000467515 DNMBPQ6XZF7 1577 aa28.13■■■□□ 2.09
EPHB4-203ENST00000467515 WRNQ14191 1432 aaPredicted RBP eCLIP28.11■■■□□ 2.09
EPHB4-203ENST00000467515 CUX1P39880 1505 aa28.11■■■□□ 2.09
EPHB4-203ENST00000467515 TOPBP1Q92547 1522 aa28.09■■■□□ 2.09
EPHB4-203ENST00000467515 BIVM-ERCC5R4GMW8 1640 aa28.07■■■□□ 2.08
EPHB4-203ENST00000467515 SYNJ1O43426 1573 aa28.06■■■□□ 2.08
EPHB4-203ENST00000467515 TOP2BQ02880 1626 aa28.05■■■□□ 2.08
EPHB4-203ENST00000467515 CUX2O14529 1486 aa27.91■■■□□ 2.06
EPHB4-203ENST00000467515 FGD5Q6ZNL6 1462 aa27.9■■■□□ 2.06
EPHB4-203ENST00000467515 POLA1P09884 1462 aaPredicted RBP27.89■■■□□ 2.06
EPHB4-203ENST00000467515 CHIC1Q5VXU3 224 aa27.89■■■□□ 2.06
EPHB4-203ENST00000467515 TRIM41Q8WV44 630 aa27.82■■■□□ 2.04
EPHB4-203ENST00000467515 TARBP1Q13395 1621 aaKnown RBP27.78■■■□□ 2.04
EPHB4-203ENST00000467515 IFT140Q96RY7 1462 aa27.76■■■□□ 2.04
EPHB4-203ENST00000467515 SOGA1O94964 1423 aa27.76■■■□□ 2.04
EPHB4-203ENST00000467515 RAD54L2Q9Y4B4 1467 aa27.75■■■□□ 2.03
EPHB4-203ENST00000467515 WDR97A6NE52 1622 aa27.73■■■□□ 2.03
EPHB4-203ENST00000467515 ABCA10Q8WWZ4 1543 aa27.68■■■□□ 2.02
EPHB4-203ENST00000467515 ZNF608Q9ULD9 1512 aaPredicted RBP27.58■■■□□ 2.01
EPHB4-203ENST00000467515 ABCA5Q8WWZ7 1642 aa27.55■■■□□ 2
EPHB4-203ENST00000467515 EIF4G3O43432 1585 aaKnown RBP27.53■■■□□ 2
EPHB4-203ENST00000467515 TDRD9Q8NDG6 1382 aaKnown RBP27.52■■■□□ 2
EPHB4-203ENST00000467515 AQRO60306 1485 aaKnown RBP eCLIP27.5■■□□□ 1.993e-7■■■□□ 16.2
EPHB4-203ENST00000467515 KIF27Q86VH2 1401 aa27.48■■□□□ 1.99
EPHB4-203ENST00000467515 GAPVD1Q14C86 1478 aa27.47■■□□□ 1.99
EPHB4-203ENST00000467515 PBRM1Q86U86 1689 aa27.45■■□□□ 1.98
EPHB4-203ENST00000467515 RUSC2Q8N2Y8 1516 aa27.43■■□□□ 1.98
EPHB4-203ENST00000467515 GRIN2BQ13224 1484 aa27.38■■□□□ 1.97
EPHB4-203ENST00000467515 ERICH3Q5RHP9 1530 aa27.36■■□□□ 1.97
EPHB4-203ENST00000467515 EEA1Q15075 1411 aa27.36■■□□□ 1.97
EPHB4-203ENST00000467515 IGF1RP08069 1367 aa27.31■■□□□ 1.96
EPHB4-203ENST00000467515 SNAPC4Q5SXM2 1469 aa27.25■■□□□ 1.95
EPHB4-203ENST00000467515 MAGI1Q96QZ7 1491 aaPredicted RBP27.25■■□□□ 1.95
EPHB4-203ENST00000467515 CUL7Q14999 1698 aa27.25■■□□□ 1.95
EPHB4-203ENST00000467515 AEBP2Q6ZN18 517 aaPredicted RBP27.25■■□□□ 1.95
EPHB4-203ENST00000467515 ADAMTS12P58397 1594 aa27.22■■□□□ 1.95
EPHB4-203ENST00000467515 CSRNP3Q8WYN3 585 aa27.21■■□□□ 1.95
EPHB4-203ENST00000467515 FAM9AQ8IZU1 332 aaPredicted RBP27.19■■□□□ 1.94
EPHB4-203ENST00000467515 FHAD1B1AJZ9 1412 aa27.16■■□□□ 1.94
EPHB4-203ENST00000467515 SYNJ2O15056 1496 aa27.14■■□□□ 1.94
EPHB4-203ENST00000467515 CARMIL1Q5VZK9 1371 aa27.14■■□□□ 1.94
EPHB4-203ENST00000467515 PRXQ9BXM0 1461 aa27.13■■□□□ 1.93
EPHB4-203ENST00000467515 CHD1O14646 1710 aa27.12■■□□□ 1.93
EPHB4-203ENST00000467515 KIF21BO75037 1637 aa27.08■■□□□ 1.93
EPHB4-203ENST00000467515 RAPGEF2Q9Y4G8 1499 aa27.06■■□□□ 1.92
EPHB4-203ENST00000467515 GRIN2AQ12879 1464 aa27.04■■□□□ 1.92
EPHB4-203ENST00000467515 CHMP7Q8WUX9 453 aaPredicted RBP27.03■■□□□ 1.92
EPHB4-203ENST00000467515 FBLN2P98095 1184 aa26.98■■□□□ 1.91
EPHB4-203ENST00000467515 GOLGA3Q08378 1498 aa26.91■■□□□ 1.9
EPHB4-203ENST00000467515 NUP160Q12769 1436 aa26.9■■□□□ 1.9
EPHB4-203ENST00000467515 CEP170Q5SW79 1584 aa26.9■■□□□ 1.9
EPHB4-203ENST00000467515 CTTNBP2Q8WZ74 1663 aa26.85■■□□□ 1.89
EPHB4-203ENST00000467515 OSCARQ8IYS5 282 aa26.82■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms