RNA–Protein interactions for RNA: ENST00000464812.1

NUDCD3-204, Transcript of NudC domain containing 3, humanhuman

TSL 5

Gene NUDCD3, Length 811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-204ENST00000464812 KDM5AP29375 1690 aaKnown RBP13.13□□□□□ -0.31
NUDCD3-204ENST00000464812 MED14O60244 1454 aa13.13□□□□□ -0.31
NUDCD3-204ENST00000464812 STRCP1A6NGW2 1772 aa13.12□□□□□ -0.31
NUDCD3-204ENST00000464812 PPLO60437 1756 aa13.11□□□□□ -0.31
NUDCD3-204ENST00000464812 SPATA31E1Q6ZUB1 1445 aa13.11□□□□□ -0.31
NUDCD3-204ENST00000464812 ZFYVE9O95405 1425 aa13.1□□□□□ -0.31
NUDCD3-204ENST00000464812 NEUROD1Q13562 356 aa13.09□□□□□ -0.31
NUDCD3-204ENST00000464812 ZNF335Q9H4Z2 1342 aaPredicted RBP13.09□□□□□ -0.31
NUDCD3-204ENST00000464812 IQGAP1P46940 1657 aa13.08□□□□□ -0.31
NUDCD3-204ENST00000464812 TMEM2Q9UHN6 1383 aa13.08□□□□□ -0.31
NUDCD3-204ENST00000464812 THEMISQ8N1K5 641 aaPredicted RBP13.08□□□□□ -0.32
NUDCD3-204ENST00000464812 NPHP4O75161 1426 aaPredicted RBP13.07□□□□□ -0.32
NUDCD3-204ENST00000464812 SCAF11Q99590 1463 aaKnown RBP13.07□□□□□ -0.32
NUDCD3-204ENST00000464812 NEXMIFQ5QGS0 1516 aa13.07□□□□□ -0.32
NUDCD3-204ENST00000464812 SLC52A1Q9NWF4 448 aa13.04□□□□□ -0.32
NUDCD3-204ENST00000464812 DMRT2Q9Y5R5 561 aa13.04□□□□□ -0.32
NUDCD3-204ENST00000464812 ALKQ9UM73 1620 aa13.03□□□□□ -0.32
NUDCD3-204ENST00000464812 NRXN3Q9Y4C0 1643 aa13.03□□□□□ -0.32
NUDCD3-204ENST00000464812 ILDR1Q86SU0 546 aaPredicted RBP13.03□□□□□ -0.32
NUDCD3-204ENST00000464812 ANKLE2Q86XL3 938 aa13.03□□□□□ -0.32
NUDCD3-204ENST00000464812 TONSLQ96HA7 1378 aa13.03□□□□□ -0.32
NUDCD3-204ENST00000464812 CERKQ8TCT0 537 aa13.02□□□□□ -0.33
NUDCD3-204ENST00000464812 RIMS2Q9UQ26 1411 aa13.02□□□□□ -0.33
NUDCD3-204ENST00000464812 XIRP1Q702N8 1843 aaKnown RBP13.02□□□□□ -0.33
NUDCD3-204ENST00000464812 TXNDC2Q86VQ3 553 aa13.01□□□□□ -0.33
NUDCD3-204ENST00000464812 L3MBTL2Q969R5 705 aa13.01□□□□□ -0.33
NUDCD3-204ENST00000464812 MYOM2P54296 1465 aa13.01□□□□□ -0.33
NUDCD3-204ENST00000464812 TRPM1Q7Z4N2 1603 aa13.01□□□□□ -0.33
NUDCD3-204ENST00000464812 ADAMTS13Q76LX8 1427 aa13□□□□□ -0.33
NUDCD3-204ENST00000464812 SETD1AO15047 1707 aaKnown RBP12.99□□□□□ -0.33
NUDCD3-204ENST00000464812 NUTM2DQ5VT03 806 aaPredicted RBP12.99□□□□□ -0.33
NUDCD3-204ENST00000464812 NRXN1Q9ULB1 1477 aa12.98□□□□□ -0.33
NUDCD3-204ENST00000464812 RGL3Q3MIN7 710 aa12.98□□□□□ -0.33
NUDCD3-204ENST00000464812 CHGAP10645 457 aaKnown RBP12.97□□□□□ -0.33
NUDCD3-204ENST00000464812 LRRC7Q96NW7 1537 aa12.97□□□□□ -0.33
NUDCD3-204ENST00000464812 PRAG1Q86YV5 1406 aa12.96□□□□□ -0.33
NUDCD3-204ENST00000464812 KIAA1210Q9ULL0 1709 aa12.96□□□□□ -0.33
NUDCD3-204ENST00000464812 PLEKHG1Q9ULL1 1385 aa12.96□□□□□ -0.33
NUDCD3-204ENST00000464812 NWD1Q149M9 1564 aa12.96□□□□□ -0.33
NUDCD3-204ENST00000464812 SLC26A8Q96RN1 970 aa12.96□□□□□ -0.33
NUDCD3-204ENST00000464812 PTPRUQ92729 1446 aa12.95□□□□□ -0.34
NUDCD3-204ENST00000464812 CHD2O14647 1828 aaKnown RBP12.95□□□□□ -0.34
NUDCD3-204ENST00000464812 ASXL1Q8IXJ9 1541 aa12.94□□□□□ -0.34
NUDCD3-204ENST00000464812 NBPF8Q3BBV2 869 aa12.94□□□□□ -0.34
NUDCD3-204ENST00000464812 DCAF11Q8TEB1 546 aa12.94□□□□□ -0.34
NUDCD3-204ENST00000464812 STAG3Q9UJ98 1225 aa12.94□□□□□ -0.34
NUDCD3-204ENST00000464812 TIMELESSQ9UNS1 1208 aa12.94□□□□□ -0.34
NUDCD3-204ENST00000464812 LAMC1P11047 1609 aa12.94□□□□□ -0.34
NUDCD3-204ENST00000464812 PIK3C2GO75747 1445 aa12.94□□□□□ -0.34
NUDCD3-204ENST00000464812 SETBP1Q9Y6X0 1596 aa12.94□□□□□ -0.34
NUDCD3-204ENST00000464812 IQSEC2Q5JU85 1478 aa12.93□□□□□ -0.34
NUDCD3-204ENST00000464812 RALGAPBQ86X10 1494 aa12.93□□□□□ -0.34
NUDCD3-204ENST00000464812 PPP1R15AO75807 674 aaPredicted RBP12.93□□□□□ -0.34
NUDCD3-204ENST00000464812 ZEB1P37275 1124 aaPredicted RBP12.93□□□□□ -0.34
NUDCD3-204ENST00000464812 ZNF326Q5BKZ1 582 aaKnown RBP12.93□□□□□ -0.34
NUDCD3-204ENST00000464812 FBXO41Q8TF61 875 aa12.93□□□□□ -0.34
NUDCD3-204ENST00000464812 CPS1P31327 1500 aa12.93□□□□□ -0.34
NUDCD3-204ENST00000464812 ADGRF5Q8IZF2 1346 aa12.92□□□□□ -0.34
NUDCD3-204ENST00000464812 KDM2AQ9Y2K7 1162 aa12.92□□□□□ -0.34
NUDCD3-204ENST00000464812 SCAF1Q9H7N4 1312 aaKnown RBP12.91□□□□□ -0.34
NUDCD3-204ENST00000464812 EID1Q9Y6B2 187 aa12.91□□□□□ -0.34
NUDCD3-204ENST00000464812 RPGRIP1LQ68CZ1 1315 aa12.9□□□□□ -0.34
NUDCD3-204ENST00000464812 XRN1Q8IZH2 1706 aaKnown RBP12.9□□□□□ -0.34
NUDCD3-204ENST00000464812 RBM33Q96EV2 1170 aaKnown RBP12.89□□□□□ -0.35
NUDCD3-204ENST00000464812 METP08581 1390 aa12.89□□□□□ -0.35
NUDCD3-204ENST00000464812 ADGRB1O14514 1584 aa12.89□□□□□ -0.35
NUDCD3-204ENST00000464812 DIP2AQ14689 1571 aa12.88□□□□□ -0.35
NUDCD3-204ENST00000464812 TBX22Q9Y458 520 aa12.87□□□□□ -0.35
NUDCD3-204ENST00000464812 ARHGEF28Q8N1W1 1705 aaKnown RBP12.87□□□□□ -0.35
NUDCD3-204ENST00000464812 KCNA6P17658 529 aa12.86□□□□□ -0.35
NUDCD3-204ENST00000464812 TMEM94Q12767 1356 aa12.85□□□□□ -0.35
NUDCD3-204ENST00000464812 KNDC1Q76NI1 1749 aa12.85□□□□□ -0.35
NUDCD3-204ENST00000464812 NKTRP30414 1462 aaKnown RBP12.85□□□□□ -0.35
NUDCD3-204ENST00000464812 GPRASP1Q5JY77 1395 aa12.84□□□□□ -0.35
NUDCD3-204ENST00000464812 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.84□□□□□ -0.35
NUDCD3-204ENST00000464812 NBPF1Q3BBV0 1214 aa12.83□□□□□ -0.36
NUDCD3-204ENST00000464812 VGFO15240 615 aaPredicted RBP12.82□□□□□ -0.36
NUDCD3-204ENST00000464812 CFAP70Q5T0N1 1121 aa12.82□□□□□ -0.36
NUDCD3-204ENST00000464812 STAC3Q96MF2 364 aa12.82□□□□□ -0.36
NUDCD3-204ENST00000464812 ROCK2O75116 1388 aaKnown RBP12.81□□□□□ -0.36
NUDCD3-204ENST00000464812 PIK3R4Q99570 1358 aa12.81□□□□□ -0.36
NUDCD3-204ENST00000464812 QRICH2Q9H0J4 1663 aa12.8□□□□□ -0.36
NUDCD3-204ENST00000464812 UBAP1LF5GYI3 381 aa12.8□□□□□ -0.36
NUDCD3-204ENST00000464812 C14orf93Q9H972 538 aaKnown RBP12.8□□□□□ -0.36
NUDCD3-204ENST00000464812 AMOTL2Q9Y2J4 779 aa12.79□□□□□ -0.36
NUDCD3-204ENST00000464812 ROBO2Q9HCK4 1378 aa12.79□□□□□ -0.36
NUDCD3-204ENST00000464812 NALCNQ8IZF0 1738 aa12.79□□□□□ -0.36
NUDCD3-204ENST00000464812 BCANQ96GW7 911 aa12.78□□□□□ -0.36
NUDCD3-204ENST00000464812 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.78□□□□□ -0.36
NUDCD3-204ENST00000464812 HDGFP51858 240 aaKnown RBP12.77□□□□□ -0.37
NUDCD3-204ENST00000464812 TMEM132EQ6IEE7 984 aa12.77□□□□□ -0.37
NUDCD3-204ENST00000464812 PROSER2Q86WR7 435 aaPredicted RBP12.77□□□□□ -0.37
NUDCD3-204ENST00000464812 USP47Q96K76 1375 aa12.77□□□□□ -0.37
NUDCD3-204ENST00000464812 YTHDC2Q9H6S0 1430 aaKnown RBP12.77□□□□□ -0.37
NUDCD3-204ENST00000464812 DLC1Q96QB1 1528 aa12.75□□□□□ -0.37
NUDCD3-204ENST00000464812 CARD11Q9BXL7 1154 aa12.75□□□□□ -0.37
NUDCD3-204ENST00000464812 TECPR2O15040 1411 aa12.74□□□□□ -0.37
NUDCD3-204ENST00000464812 PTCH1Q13635 1447 aa12.74□□□□□ -0.37
NUDCD3-204ENST00000464812 PLEKHH1Q9ULM0 1364 aa12.74□□□□□ -0.37
NUDCD3-204ENST00000464812 KCNA4P22459 653 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms