RNA–Protein interactions for RNA: ENST00000463908.2

LMNB1-204, Transcript of lamin B1, humanhuman

TSL 4

Gene LMNB1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-204ENST00000463908 NEURL4Q96JN8 1562 aa27.77■■■□□ 2.04
LMNB1-204ENST00000463908 ZNF326Q5BKZ1 582 aaKnown RBP27.77■■■□□ 2.04
LMNB1-204ENST00000463908 MED14O60244 1454 aa27.76■■■□□ 2.04
LMNB1-204ENST00000463908 SCAF11Q99590 1463 aaKnown RBP27.76■■■□□ 2.04
LMNB1-204ENST00000463908 NUTM2DQ5VT03 806 aaPredicted RBP27.76■■■□□ 2.03
LMNB1-204ENST00000463908 SPATA31E1Q6ZUB1 1445 aa27.75■■■□□ 2.03
LMNB1-204ENST00000463908 HDGFP51858 240 aaKnown RBP27.74■■■□□ 2.03
LMNB1-204ENST00000463908 NPHP4O75161 1426 aaPredicted RBP27.74■■■□□ 2.03
LMNB1-204ENST00000463908 KIF1BO60333 1816 aa27.74■■■□□ 2.03
LMNB1-204ENST00000463908 RGL3Q3MIN7 710 aa27.73■■■□□ 2.03
LMNB1-204ENST00000463908 LTBP4Q8N2S1 1624 aa27.73■■■□□ 2.03
LMNB1-204ENST00000463908 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.72■■■□□ 2.03
LMNB1-204ENST00000463908 POLR1AO95602 1720 aaPredicted RBP27.72■■■□□ 2.03
LMNB1-204ENST00000463908 DISP3Q9P2K9 1392 aa27.69■■■□□ 2.02
LMNB1-204ENST00000463908 RPGRIP1LQ68CZ1 1315 aa27.68■■■□□ 2.02
LMNB1-204ENST00000463908 SENP3Q9H4L4 574 aaPredicted RBP27.68■■■□□ 2.02
LMNB1-204ENST00000463908 PPP1R15AO75807 674 aaPredicted RBP27.67■■■□□ 2.02
LMNB1-204ENST00000463908 NEXMIFQ5QGS0 1516 aa27.67■■■□□ 2.02
LMNB1-204ENST00000463908 SIN3AQ96ST3 1273 aa27.65■■■□□ 2.02
LMNB1-204ENST00000463908 PLEKHG1Q9ULL1 1385 aa27.64■■■□□ 2.02
LMNB1-204ENST00000463908 ILDR2Q71H61 639 aa27.64■■■□□ 2.02
LMNB1-204ENST00000463908 SLC26A8Q96RN1 970 aa27.63■■■□□ 2.01
LMNB1-204ENST00000463908 IQSEC2Q5JU85 1478 aa27.63■■■□□ 2.01
LMNB1-204ENST00000463908 IQGAP1P46940 1657 aa27.62■■■□□ 2.01
LMNB1-204ENST00000463908 VGFO15240 615 aaPredicted RBP27.61■■■□□ 2.01
LMNB1-204ENST00000463908 BCANQ96GW7 911 aa27.61■■■□□ 2.01
LMNB1-204ENST00000463908 ZNF335Q9H4Z2 1342 aaPredicted RBP27.58■■■□□ 2.01
LMNB1-204ENST00000463908 ADGRF5Q8IZF2 1346 aa27.57■■■□□ 2
LMNB1-204ENST00000463908 ADAMTS13Q76LX8 1427 aa27.57■■■□□ 2
LMNB1-204ENST00000463908 TBX22Q9Y458 520 aa27.56■■■□□ 2
LMNB1-204ENST00000463908 NEUROD1Q13562 356 aa27.55■■■□□ 2
LMNB1-204ENST00000463908 PPLO60437 1756 aa27.55■■■□□ 2
LMNB1-204ENST00000463908 DCAF11Q8TEB1 546 aa27.52■■■□□ 2
LMNB1-204ENST00000463908 IFT172Q9UG01 1749 aa27.5■■□□□ 1.99
LMNB1-204ENST00000463908 SOCS7O14512 581 aa27.5■■□□□ 1.99
LMNB1-204ENST00000463908 NRXN3Q9Y4C0 1643 aa27.49■■□□□ 1.99
LMNB1-204ENST00000463908 SETBP1Q9Y6X0 1596 aa27.49■■□□□ 1.99
LMNB1-204ENST00000463908 KDM2AQ9Y2K7 1162 aa27.49■■□□□ 1.99
LMNB1-204ENST00000463908 L3MBTL2Q969R5 705 aa27.46■■□□□ 1.99
LMNB1-204ENST00000463908 KCNA6P17658 529 aa27.45■■□□□ 1.98
LMNB1-204ENST00000463908 METP08581 1390 aa27.45■■□□□ 1.98
LMNB1-204ENST00000463908 STAC3Q96MF2 364 aa27.44■■□□□ 1.98
LMNB1-204ENST00000463908 MYOM2P54296 1465 aa27.44■■□□□ 1.98
LMNB1-204ENST00000463908 NRXN1Q9ULB1 1477 aa27.44■■□□□ 1.98
LMNB1-204ENST00000463908 PIK3C2GO75747 1445 aa27.42■■□□□ 1.98
LMNB1-204ENST00000463908 STRCP1A6NGW2 1772 aa27.42■■□□□ 1.98
LMNB1-204ENST00000463908 DIP2AQ14689 1571 aa27.41■■□□□ 1.98
LMNB1-204ENST00000463908 ALKQ9UM73 1620 aa27.41■■□□□ 1.98
LMNB1-204ENST00000463908 PIK3R4Q99570 1358 aa27.4■■□□□ 1.98
LMNB1-204ENST00000463908 C14orf93Q9H972 538 aaKnown RBP27.4■■□□□ 1.98
LMNB1-204ENST00000463908 PTPRUQ92729 1446 aa27.4■■□□□ 1.98
LMNB1-204ENST00000463908 CFAP70Q5T0N1 1121 aa27.39■■□□□ 1.98
LMNB1-204ENST00000463908 CCER1Q8TC90 406 aaPredicted RBP27.39■■□□□ 1.98
LMNB1-204ENST00000463908 AMOTL2Q9Y2J4 779 aa27.38■■□□□ 1.97
LMNB1-204ENST00000463908 CLSPNQ9HAW4 1339 aa27.38■■□□□ 1.97
LMNB1-204ENST00000463908 CHD2O14647 1828 aaKnown RBP27.35■■□□□ 1.97
LMNB1-204ENST00000463908 SETD1AO15047 1707 aaKnown RBP27.35■■□□□ 1.97
LMNB1-204ENST00000463908 CPS1P31327 1500 aa27.35■■□□□ 1.97
LMNB1-204ENST00000463908 TMEM132EQ6IEE7 984 aa27.34■■□□□ 1.97
LMNB1-204ENST00000463908 LRRC7Q96NW7 1537 aa27.32■■□□□ 1.96
LMNB1-204ENST00000463908 NWD1Q149M9 1564 aa27.32■■□□□ 1.96
LMNB1-204ENST00000463908 PROSER2Q86WR7 435 aaPredicted RBP27.31■■□□□ 1.96
LMNB1-204ENST00000463908 RBM33Q96EV2 1170 aaKnown RBP27.31■■□□□ 1.96
LMNB1-204ENST00000463908 UBAP1LF5GYI3 381 aa27.3■■□□□ 1.96
LMNB1-204ENST00000463908 TONSLQ96HA7 1378 aa27.29■■□□□ 1.96
LMNB1-204ENST00000463908 PRAG1Q86YV5 1406 aa27.28■■□□□ 1.96
LMNB1-204ENST00000463908 ASXL1Q8IXJ9 1541 aa27.27■■□□□ 1.96
LMNB1-204ENST00000463908 NKTRP30414 1462 aaKnown RBP27.25■■□□□ 1.95
LMNB1-204ENST00000463908 TMEM94Q12767 1356 aa27.25■■□□□ 1.95
LMNB1-204ENST00000463908 NBPF8Q3BBV2 869 aa27.25■■□□□ 1.95
LMNB1-204ENST00000463908 XRN1Q8IZH2 1706 aaKnown RBP27.24■■□□□ 1.95
LMNB1-204ENST00000463908 STK26Q9P289 416 aa27.24■■□□□ 1.95
LMNB1-204ENST00000463908 LRPPRCP42704 1394 aaKnown RBP27.23■■□□□ 1.95
LMNB1-204ENST00000463908 NBPF1Q3BBV0 1214 aa27.23■■□□□ 1.95
LMNB1-204ENST00000463908 ROBO2Q9HCK4 1378 aa27.22■■□□□ 1.95
LMNB1-204ENST00000463908 YTHDC2Q9H6S0 1430 aaKnown RBP27.21■■□□□ 1.95
LMNB1-204ENST00000463908 ADGRB1O14514 1584 aa27.21■■□□□ 1.95
LMNB1-204ENST00000463908 ABCC11Q96J66 1382 aa27.21■■□□□ 1.95
LMNB1-204ENST00000463908 LAMC1P11047 1609 aa27.19■■□□□ 1.94
LMNB1-204ENST00000463908 TIMELESSQ9UNS1 1208 aa27.19■■□□□ 1.94
LMNB1-204ENST00000463908 XIRP1Q702N8 1843 aaKnown RBP27.18■■□□□ 1.94
LMNB1-204ENST00000463908 MED1Q15648 1581 aaPredicted RBP27.17■■□□□ 1.94
LMNB1-204ENST00000463908 TECPR2O15040 1411 aa27.16■■□□□ 1.94
LMNB1-204ENST00000463908 WAPLQ7Z5K2 1190 aa27.15■■□□□ 1.94
LMNB1-204ENST00000463908 SIRT1Q96EB6 747 aa27.15■■□□□ 1.94
LMNB1-204ENST00000463908 PTCH1Q13635 1447 aa27.15■■□□□ 1.94
LMNB1-204ENST00000463908 NCOA3Q9Y6Q9 1424 aa27.15■■□□□ 1.94
LMNB1-204ENST00000463908 TRAK1Q9UPV9 953 aa27.13■■□□□ 1.93
LMNB1-204ENST00000463908 KIAA1210Q9ULL0 1709 aa27.13■■□□□ 1.93
LMNB1-204ENST00000463908 PLEKHH1Q9ULM0 1364 aa27.11■■□□□ 1.93
LMNB1-204ENST00000463908 C19orf44Q9H6X5 657 aa27.1■■□□□ 1.93
LMNB1-204ENST00000463908 C14orf37Q86TY3 774 aa27.09■■□□□ 1.93
LMNB1-204ENST00000463908 TRPM1Q7Z4N2 1603 aa27.08■■□□□ 1.93
LMNB1-204ENST00000463908 FAM135BQ49AJ0 1406 aa27.07■■□□□ 1.92
LMNB1-204ENST00000463908 PRAM1Q96QH2 718 aa27.07■■□□□ 1.92
LMNB1-204ENST00000463908 SCAF1Q9H7N4 1312 aaKnown RBP27.07■■□□□ 1.92
LMNB1-204ENST00000463908 MSH6P52701 1360 aa27.07■■□□□ 1.92
LMNB1-204ENST00000463908 KNDC1Q76NI1 1749 aa27.07■■□□□ 1.92
LMNB1-204ENST00000463908 HSPA1LP34931 641 aa27.06■■□□□ 1.92
LMNB1-204ENST00000463908 TOM1O60784 492 aa27.05■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms