RNA–Protein interactions for RNA: ENST00000463428.5

PHACTR4-203, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 1,421 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-203ENST00000463428 ZNF326Q5BKZ1 582 aaKnown RBP20.09■□□□□ 0.81
PHACTR4-203ENST00000463428 ZFYVE9O95405 1425 aa20.09■□□□□ 0.81
PHACTR4-203ENST00000463428 TONSLQ96HA7 1378 aa20.08■□□□□ 0.8
PHACTR4-203ENST00000463428 RIMS2Q9UQ26 1411 aa20.07■□□□□ 0.8
PHACTR4-203ENST00000463428 DCAF11Q8TEB1 546 aa20.05■□□□□ 0.8
PHACTR4-203ENST00000463428 LTKP29376 864 aa20.03■□□□□ 0.8
PHACTR4-203ENST00000463428 STAC3Q96MF2 364 aa20.03■□□□□ 0.8
PHACTR4-203ENST00000463428 MYOM2P54296 1465 aa20.02■□□□□ 0.8
PHACTR4-203ENST00000463428 HSPA2P54652 639 aa20.02■□□□□ 0.79
PHACTR4-203ENST00000463428 NUTM2DQ5VT03 806 aaPredicted RBP20.02■□□□□ 0.79
PHACTR4-203ENST00000463428 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.02■□□□□ 0.79
PHACTR4-203ENST00000463428 KDM2AQ9Y2K7 1162 aa20.02■□□□□ 0.79
PHACTR4-203ENST00000463428 ADGRF5Q8IZF2 1346 aa20.01■□□□□ 0.79
PHACTR4-203ENST00000463428 NRXN1Q9ULB1 1477 aa20.01■□□□□ 0.79
PHACTR4-203ENST00000463428 HDGFP51858 240 aaKnown RBP20.01■□□□□ 0.79
PHACTR4-203ENST00000463428 TXNDC2Q86VQ3 553 aa20.01■□□□□ 0.79
PHACTR4-203ENST00000463428 VGFO15240 615 aaPredicted RBP20■□□□□ 0.79
PHACTR4-203ENST00000463428 PPP1R15AO75807 674 aaPredicted RBP20■□□□□ 0.79
PHACTR4-203ENST00000463428 SCAF11Q99590 1463 aaKnown RBP19.99■□□□□ 0.79
PHACTR4-203ENST00000463428 ANKLE2Q86XL3 938 aa19.98■□□□□ 0.79
PHACTR4-203ENST00000463428 EID1Q9Y6B2 187 aa19.98■□□□□ 0.79
PHACTR4-203ENST00000463428 AEBP2Q6ZN18 517 aaPredicted RBP19.97■□□□□ 0.79
PHACTR4-203ENST00000463428 POLR1AO95602 1720 aaPredicted RBP19.97■□□□□ 0.79
PHACTR4-203ENST00000463428 NBPF8Q3BBV2 869 aa19.96■□□□□ 0.79
PHACTR4-203ENST00000463428 PRAG1Q86YV5 1406 aa19.96■□□□□ 0.79
PHACTR4-203ENST00000463428 STRCQ7RTU9 1775 aa19.96■□□□□ 0.79
PHACTR4-203ENST00000463428 PLEKHG1Q9ULL1 1385 aa19.95■□□□□ 0.78
PHACTR4-203ENST00000463428 PIK3C2GO75747 1445 aa19.95■□□□□ 0.78
PHACTR4-203ENST00000463428 NCKAP5LQ9HCH0 1330 aa19.95■□□□□ 0.78
PHACTR4-203ENST00000463428 MED14O60244 1454 aa19.95■□□□□ 0.78
PHACTR4-203ENST00000463428 NRXN3Q9Y4C0 1643 aa19.94■□□□□ 0.78
PHACTR4-203ENST00000463428 SETBP1Q9Y6X0 1596 aa19.93■□□□□ 0.78
PHACTR4-203ENST00000463428 ZEB1P37275 1124 aaPredicted RBP19.92■□□□□ 0.78
PHACTR4-203ENST00000463428 ADAMTS13Q76LX8 1427 aa19.9■□□□□ 0.78
PHACTR4-203ENST00000463428 IQGAP1P46940 1657 aa19.9■□□□□ 0.78
PHACTR4-203ENST00000463428 C14orf93Q9H972 538 aaKnown RBP19.9■□□□□ 0.78
PHACTR4-203ENST00000463428 NPHP4O75161 1426 aaPredicted RBP19.89■□□□□ 0.78
PHACTR4-203ENST00000463428 SETD1AO15047 1707 aaKnown RBP19.89■□□□□ 0.78
PHACTR4-203ENST00000463428 KIAA1210Q9ULL0 1709 aa19.89■□□□□ 0.78
PHACTR4-203ENST00000463428 ALKQ9UM73 1620 aa19.89■□□□□ 0.77
PHACTR4-203ENST00000463428 TRPM1Q7Z4N2 1603 aa19.88■□□□□ 0.77
PHACTR4-203ENST00000463428 CFAP70Q5T0N1 1121 aa19.88■□□□□ 0.77
PHACTR4-203ENST00000463428 SENP3Q9H4L4 574 aaPredicted RBP19.88■□□□□ 0.77
PHACTR4-203ENST00000463428 TBX22Q9Y458 520 aa19.85■□□□□ 0.77
PHACTR4-203ENST00000463428 LAMC1P11047 1609 aa19.85■□□□□ 0.77
PHACTR4-203ENST00000463428 RALGAPBQ86X10 1494 aa19.85■□□□□ 0.77
PHACTR4-203ENST00000463428 NBPF1Q3BBV0 1214 aa19.85■□□□□ 0.77
PHACTR4-203ENST00000463428 SLC26A8Q96RN1 970 aa19.85■□□□□ 0.77
PHACTR4-203ENST00000463428 BCANQ96GW7 911 aa19.84■□□□□ 0.77
PHACTR4-203ENST00000463428 DIP2AQ14689 1571 aa19.83■□□□□ 0.77
PHACTR4-203ENST00000463428 ASXL1Q8IXJ9 1541 aa19.83■□□□□ 0.77
PHACTR4-203ENST00000463428 ADGRB1O14514 1584 aa19.82■□□□□ 0.76
PHACTR4-203ENST00000463428 METP08581 1390 aa19.81■□□□□ 0.76
PHACTR4-203ENST00000463428 GPRASP1Q5JY77 1395 aa19.81■□□□□ 0.76
PHACTR4-203ENST00000463428 TMEM132EQ6IEE7 984 aa19.8■□□□□ 0.76
PHACTR4-203ENST00000463428 PTPRUQ92729 1446 aa19.77■□□□□ 0.76
PHACTR4-203ENST00000463428 DMRT2Q9Y5R5 561 aa19.77■□□□□ 0.76
PHACTR4-203ENST00000463428 ROCK2O75116 1388 aaKnown RBP19.77■□□□□ 0.76
PHACTR4-203ENST00000463428 PIK3R4Q99570 1358 aa19.77■□□□□ 0.76
PHACTR4-203ENST00000463428 CHD2O14647 1828 aaKnown RBP19.77■□□□□ 0.75
PHACTR4-203ENST00000463428 YTHDC2Q9H6S0 1430 aaKnown RBP19.74■□□□□ 0.75
PHACTR4-203ENST00000463428 LRPPRCP42704 1394 aaKnown RBP19.74■□□□□ 0.75
PHACTR4-203ENST00000463428 CARD11Q9BXL7 1154 aa19.73■□□□□ 0.75
PHACTR4-203ENST00000463428 ABCC11Q96J66 1382 aa19.72■□□□□ 0.75
PHACTR4-203ENST00000463428 XRN1Q8IZH2 1706 aaKnown RBP19.71■□□□□ 0.75
PHACTR4-203ENST00000463428 AMOTL2Q9Y2J4 779 aa19.71■□□□□ 0.75
PHACTR4-203ENST00000463428 KNDC1Q76NI1 1749 aa19.71■□□□□ 0.75
PHACTR4-203ENST00000463428 STRCP1A6NGW2 1772 aa19.71■□□□□ 0.75
PHACTR4-203ENST00000463428 KCNA6P17658 529 aa19.7■□□□□ 0.74
PHACTR4-203ENST00000463428 TECPR2O15040 1411 aa19.7■□□□□ 0.74
PHACTR4-203ENST00000463428 NWD1Q149M9 1564 aa19.7■□□□□ 0.74
PHACTR4-203ENST00000463428 STK26Q9P289 416 aa19.69■□□□□ 0.74
PHACTR4-203ENST00000463428 TRAK1Q9UPV9 953 aa19.69■□□□□ 0.74
PHACTR4-203ENST00000463428 DLC1Q96QB1 1528 aa19.68■□□□□ 0.74
PHACTR4-203ENST00000463428 SIRT1Q96EB6 747 aa19.68■□□□□ 0.74
PHACTR4-203ENST00000463428 ARHGEF28Q8N1W1 1705 aaKnown RBP19.67■□□□□ 0.74
PHACTR4-203ENST00000463428 CPS1P31327 1500 aa19.67■□□□□ 0.74
PHACTR4-203ENST00000463428 ZNF335Q9H4Z2 1342 aaPredicted RBP19.66■□□□□ 0.74
PHACTR4-203ENST00000463428 ROBO2Q9HCK4 1378 aa19.65■□□□□ 0.74
PHACTR4-203ENST00000463428 USP47Q96K76 1375 aa19.65■□□□□ 0.74
PHACTR4-203ENST00000463428 PTCH1Q13635 1447 aa19.65■□□□□ 0.74
PHACTR4-203ENST00000463428 FAM135BQ49AJ0 1406 aa19.64■□□□□ 0.73
PHACTR4-203ENST00000463428 NKTRP30414 1462 aaKnown RBP19.62■□□□□ 0.73
PHACTR4-203ENST00000463428 WAPLQ7Z5K2 1190 aa19.62■□□□□ 0.73
PHACTR4-203ENST00000463428 PLEKHH1Q9ULM0 1364 aa19.61■□□□□ 0.73
PHACTR4-203ENST00000463428 HSPA5P11021 654 aaKnown RBP19.61■□□□□ 0.73
PHACTR4-203ENST00000463428 EIF4G2P78344 907 aaKnown RBP eCLIP19.61■□□□□ 0.73
PHACTR4-203ENST00000463428 ST20-MTHFSA0A0A6YYL1 179 aa19.6■□□□□ 0.73
PHACTR4-203ENST00000463428 PRAM1Q96QH2 718 aa19.6■□□□□ 0.73
PHACTR4-203ENST00000463428 LTBP4Q8N2S1 1624 aa19.59■□□□□ 0.73
PHACTR4-203ENST00000463428 EIF3AQ14152 1382 aaKnown RBP19.59■□□□□ 0.73
PHACTR4-203ENST00000463428 CENPJQ9HC77 1338 aaPredicted RBP19.59■□□□□ 0.73
PHACTR4-203ENST00000463428 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.58■□□□□ 0.72
PHACTR4-203ENST00000463428 TESK2Q96S53 571 aa19.57■□□□□ 0.72
PHACTR4-203ENST00000463428 POGKQ9P215 609 aa19.57■□□□□ 0.72
PHACTR4-203ENST00000463428 QRICH2Q9H0J4 1663 aa19.57■□□□□ 0.72
PHACTR4-203ENST00000463428 XIRP1Q702N8 1843 aaKnown RBP19.57■□□□□ 0.72
PHACTR4-203ENST00000463428 LRRC7Q96NW7 1537 aa19.56■□□□□ 0.72
PHACTR4-203ENST00000463428 PROSER2Q86WR7 435 aaPredicted RBP19.56■□□□□ 0.72
PHACTR4-203ENST00000463428 SBNO2Q9Y2G9 1366 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms