RNA–Protein interactions for RNA: ENST00000462723.1

RPA3-205, Transcript of replication protein A3, humanhuman

TSL 2

Gene RPA3, Length 989 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-205ENST00000462723 ZMYM4Q5VZL5 1548 aa11.92□□□□□ -0.5
RPA3-205ENST00000462723 KIF12Q96FN5 646 aa11.92□□□□□ -0.5
RPA3-205ENST00000462723 A2MP01023 1474 aa11.91□□□□□ -0.5
RPA3-205ENST00000462723 ABCA6Q8N139 1617 aa11.91□□□□□ -0.5
RPA3-205ENST00000462723 MAGI2Q86UL8 1455 aa11.9□□□□□ -0.5
RPA3-205ENST00000462723 DIP2CQ9Y2E4 1556 aa11.89□□□□□ -0.51
RPA3-205ENST00000462723 TRPC6Q9Y210 931 aa11.89□□□□□ -0.51
RPA3-205ENST00000462723 FAM135AQ9P2D6 1515 aa11.89□□□□□ -0.51
RPA3-205ENST00000462723 DEPDC5O75140 1603 aa11.89□□□□□ -0.51
RPA3-205ENST00000462723 IQGAP3Q86VI3 1631 aa11.89□□□□□ -0.51
RPA3-205ENST00000462723 KIF3BO15066 747 aa11.87□□□□□ -0.51
RPA3-205ENST00000462723 PKD2Q13563 968 aa11.87□□□□□ -0.51
RPA3-205ENST00000462723 KANK1Q14678 1352 aa11.87□□□□□ -0.51
RPA3-205ENST00000462723 BCORL1Q5H9F3 1711 aa11.86□□□□□ -0.51
RPA3-205ENST00000462723 TIE1P35590 1138 aa11.86□□□□□ -0.51
RPA3-205ENST00000462723 NEUROD1Q13562 356 aa11.86□□□□□ -0.51
RPA3-205ENST00000462723 SIN3AQ96ST3 1273 aa11.86□□□□□ -0.51
RPA3-205ENST00000462723 TIMELESSQ9UNS1 1208 aa11.86□□□□□ -0.51
RPA3-205ENST00000462723 COLQQ9Y215 455 aaPredicted RBP11.86□□□□□ -0.51
RPA3-205ENST00000462723 RNF17Q9BXT8 1623 aaKnown RBP11.86□□□□□ -0.51
RPA3-205ENST00000462723 YEATS2Q9ULM3 1422 aa11.86□□□□□ -0.51
RPA3-205ENST00000462723 PRDM15P57071 1507 aaPredicted RBP11.85□□□□□ -0.51
RPA3-205ENST00000462723 ATP10AO60312 1499 aa11.84□□□□□ -0.51
RPA3-205ENST00000462723 COL17A1Q9UMD9 1497 aaPredicted RBP11.84□□□□□ -0.51
RPA3-205ENST00000462723 ANKRD30BQ9BXX2 1392 aa11.84□□□□□ -0.51
RPA3-205ENST00000462723 SEC24BO95487 1268 aa11.84□□□□□ -0.51
RPA3-205ENST00000462723 VWDEQ8N2E2 1590 aa11.83□□□□□ -0.52
RPA3-205ENST00000462723 REREQ9P2R6 1566 aa11.83□□□□□ -0.52
RPA3-205ENST00000462723 MROH1Q8NDA8 1641 aa11.82□□□□□ -0.52
RPA3-205ENST00000462723 TONSLQ96HA7 1378 aa11.82□□□□□ -0.52
RPA3-205ENST00000462723 ARHGEF40Q8TER5 1519 aa11.82□□□□□ -0.52
RPA3-205ENST00000462723 TET3O43151 1660 aa11.82□□□□□ -0.52
RPA3-205ENST00000462723 MAP3K13O43283 966 aa11.81□□□□□ -0.52
RPA3-205ENST00000462723 RPRD2Q5VT52 1461 aaKnown RBP11.8□□□□□ -0.52
RPA3-205ENST00000462723 ST18O60284 1047 aa11.79□□□□□ -0.52
RPA3-205ENST00000462723 GGT6Q6P531 493 aa11.79□□□□□ -0.52
RPA3-205ENST00000462723 AGLP35573 1532 aa11.79□□□□□ -0.52
RPA3-205ENST00000462723 LMTK2Q8IWU2 1503 aa11.79□□□□□ -0.52
RPA3-205ENST00000462723 E9PCH4 1651 aa11.78□□□□□ -0.52
RPA3-205ENST00000462723 CEP152O94986 1710 aa11.78□□□□□ -0.52
RPA3-205ENST00000462723 TTLL13PA6NNM8 815 aa11.78□□□□□ -0.52
RPA3-205ENST00000462723 EFCAB6Q5THR3 1501 aa11.77□□□□□ -0.52
RPA3-205ENST00000462723 ZC3H13Q5T200 1668 aaKnown RBP11.77□□□□□ -0.53
RPA3-205ENST00000462723 WASHC2CQ9Y4E1 1318 aa11.76□□□□□ -0.53
RPA3-205ENST00000462723 CCDC144AA2RUR9 1427 aa11.76□□□□□ -0.53
RPA3-205ENST00000462723 ABCC3O15438 1527 aa11.76□□□□□ -0.53
RPA3-205ENST00000462723 SPHKAPQ2M3C7 1700 aa11.75□□□□□ -0.53
RPA3-205ENST00000462723 MMRN1Q13201 1228 aa11.75□□□□□ -0.53
RPA3-205ENST00000462723 IER5LQ5T953 404 aa11.74□□□□□ -0.53
RPA3-205ENST00000462723 PROM2Q8N271 834 aa11.74□□□□□ -0.53
RPA3-205ENST00000462723 SLAIN1Q8ND83 568 aa11.74□□□□□ -0.53
RPA3-205ENST00000462723 PLA2R1Q13018 1463 aa11.74□□□□□ -0.53
RPA3-205ENST00000462723 CAMSAP1Q5T5Y3 1602 aa11.74□□□□□ -0.53
RPA3-205ENST00000462723 PTPRTO14522 1441 aa11.73□□□□□ -0.53
RPA3-205ENST00000462723 PPP1R15AO75807 674 aaPredicted RBP11.73□□□□□ -0.53
RPA3-205ENST00000462723 TRPM2O94759 1503 aa11.73□□□□□ -0.53
RPA3-205ENST00000462723 SIGLEC1Q9BZZ2 1709 aa11.72□□□□□ -0.53
RPA3-205ENST00000462723 SPNS2Q8IVW8 549 aa11.71□□□□□ -0.53
RPA3-205ENST00000462723 L3MBTL2Q969R5 705 aa11.71□□□□□ -0.53
RPA3-205ENST00000462723 ARHGAP31Q2M1Z3 1444 aa11.7□□□□□ -0.54
RPA3-205ENST00000462723 ARID4BQ4LE39 1312 aaPredicted RBP11.7□□□□□ -0.54
RPA3-205ENST00000462723 TRIM35Q9UPQ4 493 aa11.7□□□□□ -0.54
RPA3-205ENST00000462723 NPATQ14207 1427 aa11.69□□□□□ -0.54
RPA3-205ENST00000462723 CLTCQ00610 1675 aaKnown RBP11.68□□□□□ -0.54
RPA3-205ENST00000462723 CFAP65Q6ZU64 1925 aaKnown RBP11.68□□□□□ -0.54
RPA3-205ENST00000462723 CLTCL1P53675 1640 aa11.68□□□□□ -0.54
RPA3-205ENST00000462723 MLECQ14165 292 aa11.68□□□□□ -0.54
RPA3-205ENST00000462723 ESF1Q9H501 851 aaKnown RBP11.68□□□□□ -0.54
RPA3-205ENST00000462723 CNTLNQ9NXG0 1405 aa11.68□□□□□ -0.54
RPA3-205ENST00000462723 RASEFQ8IZ41 740 aa11.67□□□□□ -0.54
RPA3-205ENST00000462723 KIF1BO60333 1816 aa11.67□□□□□ -0.54
RPA3-205ENST00000462723 NOS1P29475 1434 aa11.65□□□□□ -0.54
RPA3-205ENST00000462723 NEURL4Q96JN8 1562 aa11.65□□□□□ -0.54
RPA3-205ENST00000462723 PREX1Q8TCU6 1659 aa11.65□□□□□ -0.55
RPA3-205ENST00000462723 SPATA31E1Q6ZUB1 1445 aa11.64□□□□□ -0.55
RPA3-205ENST00000462723 ZNF316A6NFI3 1004 aaPredicted RBP11.64□□□□□ -0.55
RPA3-205ENST00000462723 RGL3Q3MIN7 710 aa11.64□□□□□ -0.55
RPA3-205ENST00000462723 UGGT1Q9NYU2 1555 aa11.63□□□□□ -0.55
RPA3-205ENST00000462723 DCAF11Q8TEB1 546 aa11.63□□□□□ -0.55
RPA3-205ENST00000462723 SYNMO15061 1565 aa11.62□□□□□ -0.55
RPA3-205ENST00000462723 UHRF1BP1Q6BDS2 1440 aa11.62□□□□□ -0.55
RPA3-205ENST00000462723 PIK3C2BO00750 1634 aa11.62□□□□□ -0.55
RPA3-205ENST00000462723 SGIP1Q9BQI5 828 aa11.62□□□□□ -0.55
RPA3-205ENST00000462723 MROH2AA6NES4 1674 aa11.62□□□□□ -0.55
RPA3-205ENST00000462723 ZNF326Q5BKZ1 582 aaKnown RBP11.61□□□□□ -0.55
RPA3-205ENST00000462723 STAC3Q96MF2 364 aa11.61□□□□□ -0.55
RPA3-205ENST00000462723 TMEM121BQ9BXQ6 578 aaPredicted RBP11.61□□□□□ -0.55
RPA3-205ENST00000462723 SLC52A1Q9NWF4 448 aa11.61□□□□□ -0.55
RPA3-205ENST00000462723 KDM2AQ9Y2K7 1162 aa11.61□□□□□ -0.55
RPA3-205ENST00000462723 ERVK-7P63135 1459 aa11.61□□□□□ -0.55
RPA3-205ENST00000462723 FER1L4A9Z1Z3 1794 aa11.6□□□□□ -0.55
RPA3-205ENST00000462723 ZMYM3Q14202 1370 aa11.6□□□□□ -0.55
RPA3-205ENST00000462723 NBPF8Q3BBV2 869 aa11.6□□□□□ -0.55
RPA3-205ENST00000462723 ADGRB3O60242 1522 aa11.6□□□□□ -0.55
RPA3-205ENST00000462723 SPATA31D1Q6ZQQ2 1576 aa11.59□□□□□ -0.55
RPA3-205ENST00000462723 PLEKHG5O94827 1062 aa11.59□□□□□ -0.55
RPA3-205ENST00000462723 CHGAP10645 457 aaKnown RBP11.59□□□□□ -0.55
RPA3-205ENST00000462723 PCDHB13Q9Y5F0 798 aa11.59□□□□□ -0.55
RPA3-205ENST00000462723 FBXO31Q5XUX0 539 aaPredicted RBP11.58□□□□□ -0.56
RPA3-205ENST00000462723 PRAG1Q86YV5 1406 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms