RNA–Protein interactions for RNA: ENST00000461623.1

ABCA9-204, Transcript of ATP binding cassette subfamily A member 9, humanhuman

TSL 5

Gene ABCA9, Length 2,172 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA9-204ENST00000461623 TMC2Q8TDI7 906 aa10.79□□□□□ -0.68
ABCA9-204ENST00000461623 CUX1P39880 1505 aa10.78□□□□□ -0.68
ABCA9-204ENST00000461623 HDGFL1Q5TGJ6 251 aa10.78□□□□□ -0.68
ABCA9-204ENST00000461623 VRTNQ9H8Y1 702 aa10.78□□□□□ -0.68
ABCA9-204ENST00000461623 KIAA1522Q9P206 1035 aaPredicted RBP10.78□□□□□ -0.68
ABCA9-204ENST00000461623 LIMD1Q9UGP4 676 aa10.77□□□□□ -0.68
ABCA9-204ENST00000461623 NLRP7Q8WX94 980 aa10.77□□□□□ -0.69
ABCA9-204ENST00000461623 TBC1D2Q9BYX2 928 aa10.77□□□□□ -0.69
ABCA9-204ENST00000461623 PRXQ9BXM0 1461 aa10.77□□□□□ -0.69
ABCA9-204ENST00000461623 NPDC1Q9NQX5 325 aaPredicted RBP10.76□□□□□ -0.69
ABCA9-204ENST00000461623 RAPGEF2Q9Y4G8 1499 aa10.76□□□□□ -0.69
ABCA9-204ENST00000461623 CLIP1P30622 1438 aa10.76□□□□□ -0.69
ABCA9-204ENST00000461623 TMEM88BA6NKF7 163 aa10.76□□□□□ -0.69
ABCA9-204ENST00000461623 ILDR1Q86SU0 546 aaPredicted RBP10.76□□□□□ -0.69
ABCA9-204ENST00000461623 UPF1Q92900 1129 aaKnown RBP eCLIP10.75□□□□□ -0.69
ABCA9-204ENST00000461623 CDHR5Q9HBB8 845 aa10.75□□□□□ -0.69
ABCA9-204ENST00000461623 VPS8Q8N3P4 1428 aa10.75□□□□□ -0.69
ABCA9-204ENST00000461623 CCDC125Q86Z20 511 aa10.75□□□□□ -0.69
ABCA9-204ENST00000461623 TMEM106CQ9BVX2 250 aa10.75□□□□□ -0.69
ABCA9-204ENST00000461623 SOCS7O14512 581 aa10.74□□□□□ -0.69
ABCA9-204ENST00000461623 TXNDC2Q86VQ3 553 aa10.73□□□□□ -0.69
ABCA9-204ENST00000461623 PPP1R12CQ9BZL4 782 aa10.73□□□□□ -0.69
ABCA9-204ENST00000461623 GNEQ9Y223 722 aaKnown RBP10.73□□□□□ -0.69
ABCA9-204ENST00000461623 MRRFQ96E11 262 aaKnown RBP10.72□□□□□ -0.69
ABCA9-204ENST00000461623 PRM3Q9NNZ6 103 aa10.72□□□□□ -0.69
ABCA9-204ENST00000461623 PAK3O75914 559 aaPredicted RBP10.71□□□□□ -0.69
ABCA9-204ENST00000461623 MICALL2Q8IY33 904 aa10.7□□□□□ -0.7
ABCA9-204ENST00000461623 FAM161AQ3B820 660 aa10.7□□□□□ -0.7
ABCA9-204ENST00000461623 C2orf72A6NCS6 295 aa10.69□□□□□ -0.7
ABCA9-204ENST00000461623 KIF27Q86VH2 1401 aa10.69□□□□□ -0.7
ABCA9-204ENST00000461623 METTL3Q86U44 580 aaKnown RBP10.69□□□□□ -0.7
ABCA9-204ENST00000461623 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.68□□□□□ -0.7
ABCA9-204ENST00000461623 PALM3A6NDB9 673 aaPredicted RBP10.67□□□□□ -0.7
ABCA9-204ENST00000461623 KIF3CO14782 793 aa10.67□□□□□ -0.7
ABCA9-204ENST00000461623 DPY19L2Q6NUT2 758 aa10.67□□□□□ -0.7
ABCA9-204ENST00000461623 RIC3Q7Z5B4 369 aa10.66□□□□□ -0.7
ABCA9-204ENST00000461623 CC2D2AQ9P2K1 1620 aa10.66□□□□□ -0.7
ABCA9-204ENST00000461623 CADPSQ9ULU8 1353 aa10.66□□□□□ -0.7
ABCA9-204ENST00000461623 LMOD1P29536 600 aaPredicted RBP10.66□□□□□ -0.7
ABCA9-204ENST00000461623 DIXDC1Q155Q3 683 aa10.66□□□□□ -0.7
ABCA9-204ENST00000461623 DNAJC14Q6Y2X3 702 aaPredicted RBP10.66□□□□□ -0.7
ABCA9-204ENST00000461623 ATG7O95352 703 aa10.65□□□□□ -0.7
ABCA9-204ENST00000461623 TRPC6Q9Y210 931 aa10.65□□□□□ -0.71
ABCA9-204ENST00000461623 CDCA8Q53HL2 280 aa10.64□□□□□ -0.71
ABCA9-204ENST00000461623 ARAP1Q96P48 1450 aa10.64□□□□□ -0.71
ABCA9-204ENST00000461623 PPM1GO15355 546 aaPredicted RBP10.63□□□□□ -0.71
ABCA9-204ENST00000461623 EVI5O60447 810 aa10.63□□□□□ -0.71
ABCA9-204ENST00000461623 AP1G2O75843 785 aa10.63□□□□□ -0.71
ABCA9-204ENST00000461623 QPCTQ16769 361 aa10.63□□□□□ -0.71
ABCA9-204ENST00000461623 GJD4Q96KN9 370 aaPredicted RBP10.63□□□□□ -0.71
ABCA9-204ENST00000461623 ZNF710Q8N1W2 664 aa10.62□□□□□ -0.71
ABCA9-204ENST00000461623 UCN2Q96RP3 112 aa10.62□□□□□ -0.71
ABCA9-204ENST00000461623 GPR37L1O60883 481 aa10.62□□□□□ -0.71
ABCA9-204ENST00000461623 USP17L8P0C7I0 530 aa10.62□□□□□ -0.71
ABCA9-204ENST00000461623 ZNF16P17020 682 aaPredicted RBP10.62□□□□□ -0.71
ABCA9-204ENST00000461623 EN1Q05925 392 aaPredicted RBP10.62□□□□□ -0.71
ABCA9-204ENST00000461623 CCER1Q8TC90 406 aaPredicted RBP10.62□□□□□ -0.71
ABCA9-204ENST00000461623 TUSC1Q2TAM9 212 aa10.61□□□□□ -0.71
ABCA9-204ENST00000461623 NOM1Q5C9Z4 860 aaKnown RBP10.61□□□□□ -0.71
ABCA9-204ENST00000461623 SPIRE2Q8WWL2 714 aa10.61□□□□□ -0.71
ABCA9-204ENST00000461623 TFIP11Q9UBB9 837 aaKnown RBP10.61□□□□□ -0.71
ABCA9-204ENST00000461623 CSPP1Q1MSJ5 1256 aa10.6□□□□□ -0.71
ABCA9-204ENST00000461623 NDUFB9Q9Y6M9 179 aa10.6□□□□□ -0.71
ABCA9-204ENST00000461623 TCF3P15923 654 aa10.6□□□□□ -0.71
ABCA9-204ENST00000461623 WASHC4Q2M389 1173 aa10.6□□□□□ -0.71
ABCA9-204ENST00000461623 PXYLP1Q8TE99 480 aa10.6□□□□□ -0.71
ABCA9-204ENST00000461623 SPTLC1O15269 473 aa10.59□□□□□ -0.71
ABCA9-204ENST00000461623 VAC14Q08AM6 782 aa10.59□□□□□ -0.71
ABCA9-204ENST00000461623 ALG2Q9H553 416 aa10.59□□□□□ -0.71
ABCA9-204ENST00000461623 MAP3K7O43318 606 aa10.58□□□□□ -0.72
ABCA9-204ENST00000461623 SMARCA5O60264 1052 aaPredicted RBP10.58□□□□□ -0.72
ABCA9-204ENST00000461623 OATP04181 439 aa10.58□□□□□ -0.72
ABCA9-204ENST00000461623 FGD5Q6ZNL6 1462 aa10.58□□□□□ -0.72
ABCA9-204ENST00000461623 PRKAR2AP13861 404 aaKnown RBP10.58□□□□□ -0.72
ABCA9-204ENST00000461623 RSBN1LQ6PCB5 846 aaPredicted RBP10.58□□□□□ -0.72
ABCA9-204ENST00000461623 DRC1Q96MC2 740 aa10.58□□□□□ -0.72
ABCA9-204ENST00000461623 ERCC3P19447 782 aa10.57□□□□□ -0.72
ABCA9-204ENST00000461623 TSR1Q2NL82 804 aaKnown RBP10.57□□□□□ -0.72
ABCA9-204ENST00000461623 RTL5Q5HYW3 569 aaPredicted RBP10.57□□□□□ -0.72
ABCA9-204ENST00000461623 PHF12Q96QT6 1004 aa10.57□□□□□ -0.72
ABCA9-204ENST00000461623 DNMBPQ6XZF7 1577 aa10.57□□□□□ -0.72
ABCA9-204ENST00000461623 LILRB3O75022 631 aa10.56□□□□□ -0.72
ABCA9-204ENST00000461623 SIRT1Q96EB6 747 aa10.56□□□□□ -0.72
ABCA9-204ENST00000461623 CUX2O14529 1486 aa10.56□□□□□ -0.72
ABCA9-204ENST00000461623 B4GALNT3Q6L9W6 998 aa10.56□□□□□ -0.72
ABCA9-204ENST00000461623 IGF1RP08069 1367 aa10.56□□□□□ -0.72
ABCA9-204ENST00000461623 ARHGAP35Q9NRY4 1499 aa10.56□□□□□ -0.72
ABCA9-204ENST00000461623 SREK1Q8WXA9 508 aaKnown RBP10.55□□□□□ -0.72
ABCA9-204ENST00000461623 MAFBQ9Y5Q3 323 aaPredicted RBP10.55□□□□□ -0.72
ABCA9-204ENST00000461623 ADGRG1Q9Y653 693 aa10.55□□□□□ -0.72
ABCA9-204ENST00000461623 FANCD2Q9BXW9 1451 aa10.55□□□□□ -0.72
ABCA9-204ENST00000461623 MAP3K1Q13233 1512 aa10.55□□□□□ -0.72
ABCA9-204ENST00000461623 PHLDB3Q6NSJ2 640 aa10.55□□□□□ -0.72
ABCA9-204ENST00000461623 SPATA32Q96LK8 384 aa10.55□□□□□ -0.72
ABCA9-204ENST00000461623 BCL2L13Q9BXK5 485 aa10.55□□□□□ -0.72
ABCA9-204ENST00000461623 CANXP27824 592 aaKnown RBP10.54□□□□□ -0.72
ABCA9-204ENST00000461623 C8orf37Q96NL8 207 aa10.53□□□□□ -0.72
ABCA9-204ENST00000461623 RBM33Q96EV2 1170 aaKnown RBP10.53□□□□□ -0.72
ABCA9-204ENST00000461623 PCDHB15Q9Y5E8 787 aa10.53□□□□□ -0.72
ABCA9-204ENST00000461623 ABCA10Q8WWZ4 1543 aa10.52□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms