RNA–Protein interactions for RNA: ENST00000461142.3

UBE2J2-209, Transcript of ubiquitin conjugating enzyme E2 J2, human

TSL 3

Gene UBE2J2, Length 837 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2J2-209	ENST00000461142	MED14	O60244	1454 aa		31.91	■■■□□ 2.7
UBE2J2-209	ENST00000461142	ZNF326	Q5BKZ1	582 aa	Known RBP	31.91	■■■□□ 2.7
UBE2J2-209	ENST00000461142	IQGAP1	P46940	1657 aa		31.9	■■■□□ 2.7
UBE2J2-209	ENST00000461142	TXNDC2	Q86VQ3	553 aa		31.9	■■■□□ 2.7
UBE2J2-209	ENST00000461142	EID1	Q9Y6B2	187 aa		31.89	■■■□□ 2.7
UBE2J2-209	ENST00000461142	NPHP4	O75161	1426 aa	Predicted RBP	31.89	■■■□□ 2.7
UBE2J2-209	ENST00000461142	PPL	O60437	1756 aa		31.88	■■■□□ 2.69
UBE2J2-209	ENST00000461142	IFT172	Q9UG01	1749 aa		31.86	■■■□□ 2.69
UBE2J2-209	ENST00000461142	NUTM2D	Q5VT03	806 aa	Predicted RBP	31.84	■■■□□ 2.69
UBE2J2-209	ENST00000461142	PPP1R15A	O75807	674 aa	Predicted RBP	31.82	■■■□□ 2.68
UBE2J2-209	ENST00000461142	RGL3	Q3MIN7	710 aa		31.82	■■■□□ 2.68
UBE2J2-209	ENST00000461142	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	31.82	■■■□□ 2.68
UBE2J2-209	ENST00000461142	DMRT2	Q9Y5R5	561 aa		31.81	■■■□□ 2.68
UBE2J2-209	ENST00000461142	PLEKHG1	Q9ULL1	1385 aa		31.81	■■■□□ 2.68
UBE2J2-209	ENST00000461142	RPGRIP1L	Q68CZ1	1315 aa		31.78	■■■□□ 2.68
UBE2J2-209	ENST00000461142	HDGF	P51858	240 aa	Known RBP	31.78	■■■□□ 2.68
UBE2J2-209	ENST00000461142	NRXN3	Q9Y4C0	1643 aa		31.75	■■■□□ 2.67
UBE2J2-209	ENST00000461142	SIN3A	Q96ST3	1273 aa		31.75	■■■□□ 2.67
UBE2J2-209	ENST00000461142	SENP3	Q9H4L4	574 aa	Predicted RBP	31.75	■■■□□ 2.67
UBE2J2-209	ENST00000461142	SETBP1	Q9Y6X0	1596 aa		31.73	■■■□□ 2.67
UBE2J2-209	ENST00000461142	MYOM2	P54296	1465 aa		31.71	■■■□□ 2.67
UBE2J2-209	ENST00000461142	ADAMTS13	Q76LX8	1427 aa		31.69	■■■□□ 2.66
UBE2J2-209	ENST00000461142	DIP2A	Q14689	1571 aa		31.68	■■■□□ 2.66
UBE2J2-209	ENST00000461142	VGF	O15240	615 aa	Predicted RBP	31.68	■■■□□ 2.66
UBE2J2-209	ENST00000461142	NEUROD1	Q13562	356 aa		31.68	■■■□□ 2.66
UBE2J2-209	ENST00000461142	BCAN	Q96GW7	911 aa		31.68	■■■□□ 2.66
UBE2J2-209	ENST00000461142	SLC26A8	Q96RN1	970 aa		31.66	■■■□□ 2.66
UBE2J2-209	ENST00000461142	ADGRF5	Q8IZF2	1346 aa		31.66	■■■□□ 2.66
UBE2J2-209	ENST00000461142	NRXN1	Q9ULB1	1477 aa		31.65	■■■□□ 2.66
UBE2J2-209	ENST00000461142	PIK3C2G	O75747	1445 aa		31.63	■■■□□ 2.65
UBE2J2-209	ENST00000461142	SETD1A	O15047	1707 aa	Known RBP	31.63	■■■□□ 2.65
UBE2J2-209	ENST00000461142	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	31.61	■■■□□ 2.65
UBE2J2-209	ENST00000461142	CCER1	Q8TC90	406 aa	Predicted RBP	31.61	■■■□□ 2.65
UBE2J2-209	ENST00000461142	DCAF11	Q8TEB1	546 aa		31.6	■■■□□ 2.65
UBE2J2-209	ENST00000461142	STRCP1	A6NGW2	1772 aa		31.59	■■■□□ 2.65
UBE2J2-209	ENST00000461142	CLSPN	Q9HAW4	1339 aa		31.59	■■■□□ 2.65
UBE2J2-209	ENST00000461142	ALK	Q9UM73	1620 aa		31.59	■■■□□ 2.65
UBE2J2-209	ENST00000461142	LTBP4	Q8N2S1	1624 aa		31.57	■■■□□ 2.64
UBE2J2-209	ENST00000461142	KDM2A	Q9Y2K7	1162 aa		31.56	■■■□□ 2.64
UBE2J2-209	ENST00000461142	TBX22	Q9Y458	520 aa		31.56	■■■□□ 2.64
UBE2J2-209	ENST00000461142	NWD1	Q149M9	1564 aa		31.56	■■■□□ 2.64
UBE2J2-209	ENST00000461142	L3MBTL2	Q969R5	705 aa		31.54	■■■□□ 2.64
UBE2J2-209	ENST00000461142	CHD2	O14647	1828 aa	Known RBP	31.53	■■■□□ 2.64
UBE2J2-209	ENST00000461142	LAMC1	P11047	1609 aa		31.53	■■■□□ 2.64
UBE2J2-209	ENST00000461142	MET	P08581	1390 aa		31.52	■■■□□ 2.64
UBE2J2-209	ENST00000461142	TONSL	Q96HA7	1378 aa		31.52	■■■□□ 2.64
UBE2J2-209	ENST00000461142	ASXL1	Q8IXJ9	1541 aa		31.5	■■■□□ 2.63
UBE2J2-209	ENST00000461142	STAC3	Q96MF2	364 aa		31.5	■■■□□ 2.63
UBE2J2-209	ENST00000461142	PIK3R4	Q99570	1358 aa		31.5	■■■□□ 2.63
UBE2J2-209	ENST00000461142	PTPRU	Q92729	1446 aa		31.49	■■■□□ 2.63
UBE2J2-209	ENST00000461142	XRN1	Q8IZH2	1706 aa	Known RBP	31.48	■■■□□ 2.63
UBE2J2-209	ENST00000461142	CPS1	P31327	1500 aa		31.48	■■■□□ 2.63
UBE2J2-209	ENST00000461142	PRAG1	Q86YV5	1406 aa		31.48	■■■□□ 2.63
UBE2J2-209	ENST00000461142	NKTR	P30414	1462 aa	Known RBP	31.45	■■■□□ 2.62
UBE2J2-209	ENST00000461142	KCNA6	P17658	529 aa		31.44	■■■□□ 2.62
UBE2J2-209	ENST00000461142	CFAP70	Q5T0N1	1121 aa		31.42	■■■□□ 2.62
UBE2J2-209	ENST00000461142	C14orf93	Q9H972	538 aa	Known RBP	31.42	■■■□□ 2.62
UBE2J2-209	ENST00000461142	KIAA1210	Q9ULL0	1709 aa		31.41	■■■□□ 2.62
UBE2J2-209	ENST00000461142	LRRC7	Q96NW7	1537 aa		31.39	■■■□□ 2.62
UBE2J2-209	ENST00000461142	ADGRB1	O14514	1584 aa		31.39	■■■□□ 2.62
UBE2J2-209	ENST00000461142	AMOTL2	Q9Y2J4	779 aa		31.37	■■■□□ 2.61
UBE2J2-209	ENST00000461142	XIRP1	Q702N8	1843 aa	Known RBP	31.35	■■■□□ 2.61
UBE2J2-209	ENST00000461142	TRPM1	Q7Z4N2	1603 aa		31.35	■■■□□ 2.61
UBE2J2-209	ENST00000461142	TMEM132E	Q6IEE7	984 aa		31.35	■■■□□ 2.61
UBE2J2-209	ENST00000461142	KNDC1	Q76NI1	1749 aa		31.35	■■■□□ 2.61
UBE2J2-209	ENST00000461142	PTCH1	Q13635	1447 aa		31.32	■■■□□ 2.61
UBE2J2-209	ENST00000461142	YTHDC2	Q9H6S0	1430 aa	Known RBP	31.32	■■■□□ 2.61
UBE2J2-209	ENST00000461142	LRPPRC	P42704	1394 aa	Known RBP	31.32	■■■□□ 2.6
UBE2J2-209	ENST00000461142	CERK	Q8TCT0	537 aa		31.3	■■■□□ 2.6
UBE2J2-209	ENST00000461142	TECPR2	O15040	1411 aa		31.3	■■■□□ 2.6
UBE2J2-209	ENST00000461142	NBPF8	Q3BBV2	869 aa		31.29	■■■□□ 2.6
UBE2J2-209	ENST00000461142	TMEM94	Q12767	1356 aa		31.29	■■■□□ 2.6
UBE2J2-209	ENST00000461142	ROBO2	Q9HCK4	1378 aa		31.29	■■■□□ 2.6
UBE2J2-209	ENST00000461142	PROSER2	Q86WR7	435 aa	Predicted RBP	31.28	■■■□□ 2.6
UBE2J2-209	ENST00000461142	IQSEC2	Q5JU85	1478 aa		31.27	■■■□□ 2.6
UBE2J2-209	ENST00000461142	STK26	Q9P289	416 aa		31.27	■■■□□ 2.6
UBE2J2-209	ENST00000461142	TIMELESS	Q9UNS1	1208 aa		31.27	■■■□□ 2.6
UBE2J2-209	ENST00000461142	RBM33	Q96EV2	1170 aa	Known RBP	31.26	■■■□□ 2.59
UBE2J2-209	ENST00000461142	ABCC11	Q96J66	1382 aa		31.26	■■■□□ 2.59
UBE2J2-209	ENST00000461142	NBPF1	Q3BBV0	1214 aa		31.24	■■■□□ 2.59
UBE2J2-209	ENST00000461142	RALGAPB	Q86X10	1494 aa		31.23	■■■□□ 2.59
UBE2J2-209	ENST00000461142	DLC1	Q96QB1	1528 aa		31.22	■■■□□ 2.59
UBE2J2-209	ENST00000461142	ARHGEF28	Q8N1W1	1705 aa	Known RBP	31.2	■■■□□ 2.58
UBE2J2-209	ENST00000461142	ROCK2	O75116	1388 aa	Known RBP	31.19	■■■□□ 2.58
UBE2J2-209	ENST00000461142	NALCN	Q8IZF0	1738 aa		31.19	■■■□□ 2.58
UBE2J2-209	ENST00000461142	NCOA3	Q9Y6Q9	1424 aa		31.17	■■■□□ 2.58
UBE2J2-209	ENST00000461142	PLEKHH1	Q9ULM0	1364 aa		31.17	■■■□□ 2.58
UBE2J2-209	ENST00000461142	FAM135B	Q49AJ0	1406 aa		31.16	■■■□□ 2.58
UBE2J2-209	ENST00000461142	TRAK1	Q9UPV9	953 aa		31.15	■■■□□ 2.58
UBE2J2-209	ENST00000461142	GPRASP1	Q5JY77	1395 aa		31.15	■■■□□ 2.58
UBE2J2-209	ENST00000461142	ADGRL3	Q9HAR2	1447 aa		31.14	■■■□□ 2.58
UBE2J2-209	ENST00000461142	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	31.12	■■■□□ 2.57
UBE2J2-209	ENST00000461142	WAPL	Q7Z5K2	1190 aa		31.12	■■■□□ 2.57
UBE2J2-209	ENST00000461142	MSH6	P52701	1360 aa		31.11	■■■□□ 2.57
UBE2J2-209	ENST00000461142	C14orf37	Q86TY3	774 aa		31.11	■■■□□ 2.57
UBE2J2-209	ENST00000461142	PRAM1	Q96QH2	718 aa		31.1	■■■□□ 2.57
UBE2J2-209	ENST00000461142	SIRT1	Q96EB6	747 aa		31.09	■■■□□ 2.57
UBE2J2-209	ENST00000461142	DCC	P43146	1447 aa		31.06	■■■□□ 2.56
UBE2J2-209	ENST00000461142	CDC42BPG	Q6DT37	1551 aa		31.05	■■■□□ 2.56
UBE2J2-209	ENST00000461142	SAFB2	Q14151	953 aa	Known RBP eCLIP	31.04	■■■□□ 2.56

Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms