RNA–Protein interactions for RNA: ENST00000460940.5

APTX-209, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,874 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-209ENST00000460940 HDGFP51858 240 aaKnown RBP16.27■□□□□ 0.2
APTX-209ENST00000460940 TXNDC2Q86VQ3 553 aa16.27■□□□□ 0.2
APTX-209ENST00000460940 IQGAP1P46940 1657 aa16.27■□□□□ 0.19
APTX-209ENST00000460940 ANKRD30BQ9BXX2 1392 aa16.26■□□□□ 0.19
APTX-209ENST00000460940 LTKP29376 864 aa16.26■□□□□ 0.19
APTX-209ENST00000460940 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.26■□□□□ 0.19
APTX-209ENST00000460940 SPATA31E1Q6ZUB1 1445 aa16.23■□□□□ 0.19
APTX-209ENST00000460940 ZNF326Q5BKZ1 582 aaKnown RBP16.22■□□□□ 0.19
APTX-209ENST00000460940 PLEKHG1Q9ULL1 1385 aa16.22■□□□□ 0.19
APTX-209ENST00000460940 NEXMIFQ5QGS0 1516 aa16.22■□□□□ 0.19
APTX-209ENST00000460940 PPP1R15AO75807 674 aaPredicted RBP16.22■□□□□ 0.19
APTX-209ENST00000460940 RPGRIP1LQ68CZ1 1315 aa16.21■□□□□ 0.19
APTX-209ENST00000460940 DHX57Q6P158 1386 aaKnown RBP16.18■□□□□ 0.18
APTX-209ENST00000460940 DIP2AQ14689 1571 aa16.18■□□□□ 0.18
APTX-209ENST00000460940 PCGF6Q9BYE7 350 aa16.18■□□□□ 0.18
APTX-209ENST00000460940 SETBP1Q9Y6X0 1596 aa16.17■□□□□ 0.18
APTX-209ENST00000460940 PPLO60437 1756 aa16.16■□□□□ 0.18
APTX-209ENST00000460940 LTBP4Q8N2S1 1624 aa16.15■□□□□ 0.18
APTX-209ENST00000460940 VGFO15240 615 aaPredicted RBP16.15■□□□□ 0.18
APTX-209ENST00000460940 BCANQ96GW7 911 aa16.14■□□□□ 0.17
APTX-209ENST00000460940 ZNF335Q9H4Z2 1342 aaPredicted RBP16.14■□□□□ 0.17
APTX-209ENST00000460940 IFT172Q9UG01 1749 aa16.14■□□□□ 0.17
APTX-209ENST00000460940 NUTM2DQ5VT03 806 aaPredicted RBP16.14■□□□□ 0.17
APTX-209ENST00000460940 ADAMTS13Q76LX8 1427 aa16.14■□□□□ 0.17
APTX-209ENST00000460940 CPS1P31327 1500 aa16.13■□□□□ 0.17
APTX-209ENST00000460940 NRXN3Q9Y4C0 1643 aa16.12■□□□□ 0.17
APTX-209ENST00000460940 MYOM2P54296 1465 aa16.12■□□□□ 0.17
APTX-209ENST00000460940 RGL3Q3MIN7 710 aa16.12■□□□□ 0.17
APTX-209ENST00000460940 TBX22Q9Y458 520 aa16.12■□□□□ 0.17
APTX-209ENST00000460940 PIK3R4Q99570 1358 aa16.11■□□□□ 0.17
APTX-209ENST00000460940 SLC26A8Q96RN1 970 aa16.11■□□□□ 0.17
APTX-209ENST00000460940 NWD1Q149M9 1564 aa16.1■□□□□ 0.17
APTX-209ENST00000460940 IQSEC2Q5JU85 1478 aa16.1■□□□□ 0.17
APTX-209ENST00000460940 STAC3Q96MF2 364 aa16.09■□□□□ 0.17
APTX-209ENST00000460940 NKTRP30414 1462 aaKnown RBP16.08■□□□□ 0.17
APTX-209ENST00000460940 NRXN1Q9ULB1 1477 aa16.08■□□□□ 0.17
APTX-209ENST00000460940 KCNA6P17658 529 aa16.08■□□□□ 0.16
APTX-209ENST00000460940 PIK3C2GO75747 1445 aa16.07■□□□□ 0.16
APTX-209ENST00000460940 CERKQ8TCT0 537 aa16.07■□□□□ 0.16
APTX-209ENST00000460940 ADGRF5Q8IZF2 1346 aa16.06■□□□□ 0.16
APTX-209ENST00000460940 STRCP1A6NGW2 1772 aa16.06■□□□□ 0.16
APTX-209ENST00000460940 ALKQ9UM73 1620 aa16.05■□□□□ 0.16
APTX-209ENST00000460940 SENP3Q9H4L4 574 aaPredicted RBP16.05■□□□□ 0.16
APTX-209ENST00000460940 SETD1AO15047 1707 aaKnown RBP16.04■□□□□ 0.16
APTX-209ENST00000460940 CHD2O14647 1828 aaKnown RBP16.04■□□□□ 0.16
APTX-209ENST00000460940 LAMC1P11047 1609 aa16.04■□□□□ 0.16
APTX-209ENST00000460940 LRRC7Q96NW7 1537 aa16.03■□□□□ 0.16
APTX-209ENST00000460940 METP08581 1390 aa16.02■□□□□ 0.16
APTX-209ENST00000460940 DCAF11Q8TEB1 546 aa16.02■□□□□ 0.16
APTX-209ENST00000460940 XRN1Q8IZH2 1706 aaKnown RBP16.02■□□□□ 0.15
APTX-209ENST00000460940 PRAG1Q86YV5 1406 aa16.01■□□□□ 0.15
APTX-209ENST00000460940 CLSPNQ9HAW4 1339 aa16.01■□□□□ 0.15
APTX-209ENST00000460940 SIN3AQ96ST3 1273 aa16.01■□□□□ 0.15
APTX-209ENST00000460940 PTPRUQ92729 1446 aa16■□□□□ 0.15
APTX-209ENST00000460940 AMOTL2Q9Y2J4 779 aa15.99■□□□□ 0.15
APTX-209ENST00000460940 SCAF1Q9H7N4 1312 aaKnown RBP15.99■□□□□ 0.15
APTX-209ENST00000460940 PTCH1Q13635 1447 aa15.98■□□□□ 0.15
APTX-209ENST00000460940 NEUROD1Q13562 356 aa15.98■□□□□ 0.15
APTX-209ENST00000460940 C14orf93Q9H972 538 aaKnown RBP15.98■□□□□ 0.15
APTX-209ENST00000460940 NCOA3Q9Y6Q9 1424 aa15.98■□□□□ 0.15
APTX-209ENST00000460940 ASXL1Q8IXJ9 1541 aa15.98■□□□□ 0.15
APTX-209ENST00000460940 KDM2AQ9Y2K7 1162 aa15.97■□□□□ 0.15
APTX-209ENST00000460940 TMEM94Q12767 1356 aa15.97■□□□□ 0.15
APTX-209ENST00000460940 PROSER2Q86WR7 435 aaPredicted RBP15.97■□□□□ 0.15
APTX-209ENST00000460940 TECPR2O15040 1411 aa15.95■□□□□ 0.14
APTX-209ENST00000460940 LRPPRCP42704 1394 aaKnown RBP15.95■□□□□ 0.14
APTX-209ENST00000460940 L3MBTL2Q969R5 705 aa15.95■□□□□ 0.14
APTX-209ENST00000460940 TONSLQ96HA7 1378 aa15.95■□□□□ 0.14
APTX-209ENST00000460940 CFAP70Q5T0N1 1121 aa15.94■□□□□ 0.14
APTX-209ENST00000460940 XIRP1Q702N8 1843 aaKnown RBP15.94■□□□□ 0.14
APTX-209ENST00000460940 KNDC1Q76NI1 1749 aa15.94■□□□□ 0.14
APTX-209ENST00000460940 KIAA1210Q9ULL0 1709 aa15.94■□□□□ 0.14
APTX-209ENST00000460940 ADGRB1O14514 1584 aa15.93■□□□□ 0.14
APTX-209ENST00000460940 YTHDC2Q9H6S0 1430 aaKnown RBP15.93■□□□□ 0.14
APTX-209ENST00000460940 ABCC11Q96J66 1382 aa15.93■□□□□ 0.14
APTX-209ENST00000460940 FBXO41Q8TF61 875 aa15.93■□□□□ 0.14
APTX-209ENST00000460940 CCER1Q8TC90 406 aaPredicted RBP15.91■□□□□ 0.14
APTX-209ENST00000460940 MSH6P52701 1360 aa15.91■□□□□ 0.14
APTX-209ENST00000460940 ROBO2Q9HCK4 1378 aa15.91■□□□□ 0.14
APTX-209ENST00000460940 TMEM132EQ6IEE7 984 aa15.9■□□□□ 0.14
APTX-209ENST00000460940 DCCP43146 1447 aa15.89■□□□□ 0.13
APTX-209ENST00000460940 FAM135BQ49AJ0 1406 aa15.89■□□□□ 0.13
APTX-209ENST00000460940 TOM1O60784 492 aa15.89■□□□□ 0.13
APTX-209ENST00000460940 ZEB1P37275 1124 aaPredicted RBP15.89■□□□□ 0.13
APTX-209ENST00000460940 DLC1Q96QB1 1528 aa15.89■□□□□ 0.13
APTX-209ENST00000460940 ADGRL3Q9HAR2 1447 aa15.89■□□□□ 0.13
APTX-209ENST00000460940 UBAP1LF5GYI3 381 aa15.88■□□□□ 0.13
APTX-209ENST00000460940 C14orf37Q86TY3 774 aa15.88■□□□□ 0.13
APTX-209ENST00000460940 SIRT1Q96EB6 747 aa15.88■□□□□ 0.13
APTX-209ENST00000460940 TIMELESSQ9UNS1 1208 aa15.88■□□□□ 0.13
APTX-209ENST00000460940 RBM33Q96EV2 1170 aaKnown RBP15.86■□□□□ 0.13
APTX-209ENST00000460940 C19orf44Q9H6X5 657 aa15.86■□□□□ 0.13
APTX-209ENST00000460940 STK26Q9P289 416 aa15.86■□□□□ 0.13
APTX-209ENST00000460940 TRPM1Q7Z4N2 1603 aa15.85■□□□□ 0.13
APTX-209ENST00000460940 NALCNQ8IZF0 1738 aa15.85■□□□□ 0.13
APTX-209ENST00000460940 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.84■□□□□ 0.13
APTX-209ENST00000460940 CADPS2Q86UW7 1296 aa15.84■□□□□ 0.13
APTX-209ENST00000460940 ATF3P18847 181 aa15.82■□□□□ 0.12
APTX-209ENST00000460940 RALGAPBQ86X10 1494 aa15.82■□□□□ 0.12
APTX-209ENST00000460940 CDC42BPGQ6DT37 1551 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms