RNA–Protein interactions for RNA: ENST00000460227.4

MECP2-206, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5

Gene MECP2, Length 1,298 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-206ENST00000460227 SLIT1O75093 1534 aa18.73■□□□□ 0.59
MECP2-206ENST00000460227 TMEM131LA2VDJ0 1609 aa18.72■□□□□ 0.59
MECP2-206ENST00000460227 CLTCL1P53675 1640 aa18.72■□□□□ 0.59
MECP2-206ENST00000460227 ADGRB3O60242 1522 aa18.72■□□□□ 0.59
MECP2-206ENST00000460227 SPATA31E1Q6ZUB1 1445 aa18.72■□□□□ 0.59
MECP2-206ENST00000460227 RIMS2Q9UQ26 1411 aa18.71■□□□□ 0.59
MECP2-206ENST00000460227 UBR1Q8IWV7 1749 aa18.71■□□□□ 0.59
MECP2-206ENST00000460227 ZFYVE9O95405 1425 aa18.7■□□□□ 0.58
MECP2-206ENST00000460227 NUTM2DQ5VT03 806 aaPredicted RBP18.7■□□□□ 0.58
MECP2-206ENST00000460227 KDM5AP29375 1690 aaKnown RBP18.69■□□□□ 0.58
MECP2-206ENST00000460227 VGFO15240 615 aaPredicted RBP18.68■□□□□ 0.58
MECP2-206ENST00000460227 MED14O60244 1454 aa18.67■□□□□ 0.58
MECP2-206ENST00000460227 NEUROD1Q13562 356 aa18.67■□□□□ 0.58
MECP2-206ENST00000460227 SCAF11Q99590 1463 aaKnown RBP18.66■□□□□ 0.58
MECP2-206ENST00000460227 PPP1R15AO75807 674 aaPredicted RBP18.66■□□□□ 0.58
MECP2-206ENST00000460227 NPHP4O75161 1426 aaPredicted RBP18.65■□□□□ 0.58
MECP2-206ENST00000460227 STAC3Q96MF2 364 aa18.64■□□□□ 0.57
MECP2-206ENST00000460227 NEURL4Q96JN8 1562 aa18.64■□□□□ 0.57
MECP2-206ENST00000460227 CLSPNQ9HAW4 1339 aa18.63■□□□□ 0.57
MECP2-206ENST00000460227 PLEKHG1Q9ULL1 1385 aa18.63■□□□□ 0.57
MECP2-206ENST00000460227 STRCQ7RTU9 1775 aa18.63■□□□□ 0.57
MECP2-206ENST00000460227 TBX22Q9Y458 520 aa18.62■□□□□ 0.57
MECP2-206ENST00000460227 ADGRF5Q8IZF2 1346 aa18.61■□□□□ 0.57
MECP2-206ENST00000460227 CCER1Q8TC90 406 aaPredicted RBP18.61■□□□□ 0.57
MECP2-206ENST00000460227 DCAF11Q8TEB1 546 aa18.61■□□□□ 0.57
MECP2-206ENST00000460227 BCANQ96GW7 911 aa18.61■□□□□ 0.57
MECP2-206ENST00000460227 SLC26A8Q96RN1 970 aa18.61■□□□□ 0.57
MECP2-206ENST00000460227 L3MBTL2Q969R5 705 aa18.6■□□□□ 0.57
MECP2-206ENST00000460227 KDM2AQ9Y2K7 1162 aa18.59■□□□□ 0.57
MECP2-206ENST00000460227 NEXMIFQ5QGS0 1516 aa18.59■□□□□ 0.57
MECP2-206ENST00000460227 KIF1BO60333 1816 aa18.58■□□□□ 0.56
MECP2-206ENST00000460227 MYO5BQ9ULV0 1848 aa18.55■□□□□ 0.56
MECP2-206ENST00000460227 ADAMTS13Q76LX8 1427 aa18.55■□□□□ 0.56
MECP2-206ENST00000460227 C14orf93Q9H972 538 aaKnown RBP18.54■□□□□ 0.56
MECP2-206ENST00000460227 KCNA6P17658 529 aa18.52■□□□□ 0.56
MECP2-206ENST00000460227 ILDR1Q86SU0 546 aaPredicted RBP18.52■□□□□ 0.56
MECP2-206ENST00000460227 TIMELESSQ9UNS1 1208 aa18.52■□□□□ 0.56
MECP2-206ENST00000460227 ZNF335Q9H4Z2 1342 aaPredicted RBP18.51■□□□□ 0.55
MECP2-206ENST00000460227 CFAP70Q5T0N1 1121 aa18.5■□□□□ 0.55
MECP2-206ENST00000460227 NRXN1Q9ULB1 1477 aa18.5■□□□□ 0.55
MECP2-206ENST00000460227 METP08581 1390 aa18.49■□□□□ 0.55
MECP2-206ENST00000460227 PIK3R4Q99570 1358 aa18.49■□□□□ 0.55
MECP2-206ENST00000460227 MYOM2P54296 1465 aa18.49■□□□□ 0.55
MECP2-206ENST00000460227 POLR1AO95602 1720 aaPredicted RBP18.48■□□□□ 0.55
MECP2-206ENST00000460227 PIK3C2GO75747 1445 aa18.48■□□□□ 0.55
MECP2-206ENST00000460227 IQGAP1P46940 1657 aa18.47■□□□□ 0.55
MECP2-206ENST00000460227 SETBP1Q9Y6X0 1596 aa18.47■□□□□ 0.55
MECP2-206ENST00000460227 TONSLQ96HA7 1378 aa18.47■□□□□ 0.55
MECP2-206ENST00000460227 AMOTL2Q9Y2J4 779 aa18.47■□□□□ 0.55
MECP2-206ENST00000460227 PPLO60437 1756 aa18.45■□□□□ 0.54
MECP2-206ENST00000460227 TMEM132EQ6IEE7 984 aa18.45■□□□□ 0.54
MECP2-206ENST00000460227 PTPRUQ92729 1446 aa18.44■□□□□ 0.54
MECP2-206ENST00000460227 NBPF8Q3BBV2 869 aa18.44■□□□□ 0.54
MECP2-206ENST00000460227 ALKQ9UM73 1620 aa18.43■□□□□ 0.54
MECP2-206ENST00000460227 NRXN3Q9Y4C0 1643 aa18.42■□□□□ 0.54
MECP2-206ENST00000460227 PRAG1Q86YV5 1406 aa18.42■□□□□ 0.54
MECP2-206ENST00000460227 IFT172Q9UG01 1749 aa18.41■□□□□ 0.54
MECP2-206ENST00000460227 NBPF1Q3BBV0 1214 aa18.41■□□□□ 0.54
MECP2-206ENST00000460227 DIP2AQ14689 1571 aa18.41■□□□□ 0.54
MECP2-206ENST00000460227 PROSER2Q86WR7 435 aaPredicted RBP18.4■□□□□ 0.54
MECP2-206ENST00000460227 CERKQ8TCT0 537 aa18.4■□□□□ 0.54
MECP2-206ENST00000460227 LTBP4Q8N2S1 1624 aa18.4■□□□□ 0.54
MECP2-206ENST00000460227 SIRT1Q96EB6 747 aa18.39■□□□□ 0.53
MECP2-206ENST00000460227 ABCC11Q96J66 1382 aa18.39■□□□□ 0.53
MECP2-206ENST00000460227 STK26Q9P289 416 aa18.38■□□□□ 0.53
MECP2-206ENST00000460227 LRPPRCP42704 1394 aaKnown RBP18.38■□□□□ 0.53
MECP2-206ENST00000460227 RBM33Q96EV2 1170 aaKnown RBP18.36■□□□□ 0.53
MECP2-206ENST00000460227 CPS1P31327 1500 aa18.35■□□□□ 0.53
MECP2-206ENST00000460227 YTHDC2Q9H6S0 1430 aaKnown RBP18.34■□□□□ 0.53
MECP2-206ENST00000460227 LRRC7Q96NW7 1537 aa18.33■□□□□ 0.53
MECP2-206ENST00000460227 TMEM94Q12767 1356 aa18.33■□□□□ 0.53
MECP2-206ENST00000460227 TRAK1Q9UPV9 953 aa18.33■□□□□ 0.52
MECP2-206ENST00000460227 ROBO2Q9HCK4 1378 aa18.32■□□□□ 0.52
MECP2-206ENST00000460227 WAPLQ7Z5K2 1190 aa18.32■□□□□ 0.52
MECP2-206ENST00000460227 ADGRB1O14514 1584 aa18.32■□□□□ 0.52
MECP2-206ENST00000460227 NCOA3Q9Y6Q9 1424 aa18.32■□□□□ 0.52
MECP2-206ENST00000460227 NWD1Q149M9 1564 aa18.31■□□□□ 0.52
MECP2-206ENST00000460227 ASXL1Q8IXJ9 1541 aa18.31■□□□□ 0.52
MECP2-206ENST00000460227 NKTRP30414 1462 aaKnown RBP18.31■□□□□ 0.52
MECP2-206ENST00000460227 TECPR2O15040 1411 aa18.31■□□□□ 0.52
MECP2-206ENST00000460227 CHD2O14647 1828 aaKnown RBP18.3■□□□□ 0.52
MECP2-206ENST00000460227 SETD1AO15047 1707 aaKnown RBP18.3■□□□□ 0.52
MECP2-206ENST00000460227 STRCP1A6NGW2 1772 aa18.3■□□□□ 0.52
MECP2-206ENST00000460227 SCAF1Q9H7N4 1312 aaKnown RBP18.29■□□□□ 0.52
MECP2-206ENST00000460227 C19orf44Q9H6X5 657 aa18.29■□□□□ 0.52
MECP2-206ENST00000460227 GPRASP1Q5JY77 1395 aa18.29■□□□□ 0.52
MECP2-206ENST00000460227 PRAM1Q96QH2 718 aa18.28■□□□□ 0.52
MECP2-206ENST00000460227 PTCH1Q13635 1447 aa18.28■□□□□ 0.52
MECP2-206ENST00000460227 ROCK2O75116 1388 aaKnown RBP18.28■□□□□ 0.52
MECP2-206ENST00000460227 FAM135BQ49AJ0 1406 aa18.27■□□□□ 0.52
MECP2-206ENST00000460227 FBXO41Q8TF61 875 aa18.27■□□□□ 0.52
MECP2-206ENST00000460227 CARD11Q9BXL7 1154 aa18.26■□□□□ 0.51
MECP2-206ENST00000460227 POGKQ9P215 609 aa18.26■□□□□ 0.51
MECP2-206ENST00000460227 PLEKHH1Q9ULM0 1364 aa18.26■□□□□ 0.51
MECP2-206ENST00000460227 LAMC1P11047 1609 aa18.25■□□□□ 0.51
MECP2-206ENST00000460227 XRN1Q8IZH2 1706 aaKnown RBP18.25■□□□□ 0.51
MECP2-206ENST00000460227 IQSEC2Q5JU85 1478 aa18.25■□□□□ 0.51
MECP2-206ENST00000460227 C14orf37Q86TY3 774 aa18.24■□□□□ 0.51
MECP2-206ENST00000460227 KIAA1210Q9ULL0 1709 aa18.23■□□□□ 0.51
MECP2-206ENST00000460227 RALGAPBQ86X10 1494 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 253.2 ms