RNA–Protein interactions for RNA: ENST00000459988.1

UBAP2-208, Transcript of ubiquitin associated protein 2, humanhuman

TSL 2

Gene UBAP2, Length 2,628 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP2-208ENST00000459988 COL22A1Q8NFW1 1626 aaPredicted RBP10.37□□□□□ -0.75
UBAP2-208ENST00000459988 PRELPP51888 382 aa10.36□□□□□ -0.75
UBAP2-208ENST00000459988 AATKQ6ZMQ8 1374 aa10.36□□□□□ -0.75
UBAP2-208ENST00000459988 PRXQ9BXM0 1461 aa10.36□□□□□ -0.75
UBAP2-208ENST00000459988 PARD3Q8TEW0 1356 aa10.35□□□□□ -0.75
UBAP2-208ENST00000459988 SF3B2Q13435 895 aaKnown RBP10.35□□□□□ -0.75
UBAP2-208ENST00000459988 HAP1P54257 671 aaPredicted RBP10.35□□□□□ -0.75
UBAP2-208ENST00000459988 ERICH6Q7L0X2 663 aa10.35□□□□□ -0.75
UBAP2-208ENST00000459988 CDK11AQ9UQ88 783 aaPredicted RBP10.35□□□□□ -0.75
UBAP2-208ENST00000459988 TROQ12816 1431 aaPredicted RBP10.34□□□□□ -0.75
UBAP2-208ENST00000459988 FKBP8Q14318 412 aa10.34□□□□□ -0.75
UBAP2-208ENST00000459988 SLAIN2Q9P270 581 aa10.34□□□□□ -0.75
UBAP2-208ENST00000459988 MARF1Q9Y4F3 1742 aaKnown RBP10.34□□□□□ -0.75
UBAP2-208ENST00000459988 PELP1Q8IZL8 1130 aaKnown RBP10.34□□□□□ -0.75
UBAP2-208ENST00000459988 ZNF784Q8NCA9 323 aaPredicted RBP10.34□□□□□ -0.75
UBAP2-208ENST00000459988 ADGRB2O60241 1585 aa10.33□□□□□ -0.76
UBAP2-208ENST00000459988 PODXL2Q9NZ53 605 aa10.33□□□□□ -0.76
UBAP2-208ENST00000459988 ARHGAP35Q9NRY4 1499 aa10.32□□□□□ -0.76
UBAP2-208ENST00000459988 AFAP1Q8N556 730 aa10.32□□□□□ -0.76
UBAP2-208ENST00000459988 RPRD2Q5VT52 1461 aaKnown RBP10.32□□□□□ -0.76
UBAP2-208ENST00000459988 TET3O43151 1660 aa10.32□□□□□ -0.76
UBAP2-208ENST00000459988 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.32□□□□□ -0.76
UBAP2-208ENST00000459988 HNRNPUL2Q1KMD3 747 aaKnown RBP10.32□□□□□ -0.76
UBAP2-208ENST00000459988 CHD2O14647 1828 aaKnown RBP10.31□□□□□ -0.76
UBAP2-208ENST00000459988 SYCP2Q9BX26 1530 aa10.31□□□□□ -0.76
UBAP2-208ENST00000459988 NEXMIFQ5QGS0 1516 aa10.3□□□□□ -0.76
UBAP2-208ENST00000459988 HOMEZQ8IX15 550 aa10.3□□□□□ -0.76
UBAP2-208ENST00000459988 NCOA2Q15596 1464 aa10.29□□□□□ -0.76
UBAP2-208ENST00000459988 FNBP4Q8N3X1 1017 aaPredicted RBP10.29□□□□□ -0.76
UBAP2-208ENST00000459988 CROCC2H7BZ55 1655 aa10.28□□□□□ -0.76
UBAP2-208ENST00000459988 PTPN23Q9H3S7 1636 aa10.28□□□□□ -0.76
UBAP2-208ENST00000459988 BAG6P46379 1132 aa10.28□□□□□ -0.76
UBAP2-208ENST00000459988 MYT1LQ9UL68 1186 aa10.28□□□□□ -0.76
UBAP2-208ENST00000459988 ERVK-7P63135 1459 aa10.27□□□□□ -0.77
UBAP2-208ENST00000459988 RANGAP1P46060 587 aaPredicted RBP10.27□□□□□ -0.77
UBAP2-208ENST00000459988 PCGF6Q9BYE7 350 aa10.27□□□□□ -0.77
UBAP2-208ENST00000459988 CDC42BPAQ5VT25 1732 aa10.26□□□□□ -0.77
UBAP2-208ENST00000459988 RREB1Q92766 1687 aa10.26□□□□□ -0.77
UBAP2-208ENST00000459988 EIF2AK4Q9P2K8 1649 aaKnown RBP10.26□□□□□ -0.77
UBAP2-208ENST00000459988 SPAG9O60271 1321 aaKnown RBP10.25□□□□□ -0.77
UBAP2-208ENST00000459988 CADPS2Q86UW7 1296 aa10.25□□□□□ -0.77
UBAP2-208ENST00000459988 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.25□□□□□ -0.77
UBAP2-208ENST00000459988 PNPLA6Q8IY17 1366 aa10.25□□□□□ -0.77
UBAP2-208ENST00000459988 ASXL1Q8IXJ9 1541 aa10.25□□□□□ -0.77
UBAP2-208ENST00000459988 LRRC59Q96AG4 307 aaKnown RBP10.25□□□□□ -0.77
UBAP2-208ENST00000459988 EID1Q9Y6B2 187 aa10.25□□□□□ -0.77
UBAP2-208ENST00000459988 PIK3R4Q99570 1358 aa10.25□□□□□ -0.77
UBAP2-208ENST00000459988 GIGYF1O75420 1035 aaPredicted RBP10.24□□□□□ -0.77
UBAP2-208ENST00000459988 TRIM26Q12899 539 aaPredicted RBP10.24□□□□□ -0.77
UBAP2-208ENST00000459988 FOXD4L1Q9NU39 408 aa10.24□□□□□ -0.77
UBAP2-208ENST00000459988 PROSER2Q86WR7 435 aaPredicted RBP10.23□□□□□ -0.77
UBAP2-208ENST00000459988 VSIG10Q8N0Z9 540 aa10.23□□□□□ -0.77
UBAP2-208ENST00000459988 DHX29Q7Z478 1369 aaKnown RBP10.23□□□□□ -0.77
UBAP2-208ENST00000459988 BRWD3Q6RI45 1802 aa10.23□□□□□ -0.77
UBAP2-208ENST00000459988 CEP162Q5TB80 1403 aa10.23□□□□□ -0.77
UBAP2-208ENST00000459988 ADGRB3O60242 1522 aa10.23□□□□□ -0.77
UBAP2-208ENST00000459988 ARHGAP31Q2M1Z3 1444 aa10.22□□□□□ -0.77
UBAP2-208ENST00000459988 RGPD3A6NKT7 1758 aaPredicted RBP10.21□□□□□ -0.78
UBAP2-208ENST00000459988 RGPD4Q7Z3J3 1758 aa10.21□□□□□ -0.78
UBAP2-208ENST00000459988 TNS1Q9HBL0 1735 aaKnown RBP10.2□□□□□ -0.78
UBAP2-208ENST00000459988 FYCO1Q9BQS8 1478 aa10.2□□□□□ -0.78
UBAP2-208ENST00000459988 GTF3C3Q9Y5Q9 886 aa10.2□□□□□ -0.78
UBAP2-208ENST00000459988 MAST1Q9Y2H9 1570 aa10.2□□□□□ -0.78
UBAP2-208ENST00000459988 NWD2Q9ULI1 1742 aa10.19□□□□□ -0.78
UBAP2-208ENST00000459988 USP21Q9UK80 565 aa10.18□□□□□ -0.78
UBAP2-208ENST00000459988 FMN1Q68DA7 1419 aa10.18□□□□□ -0.78
UBAP2-208ENST00000459988 TMEM2Q9UHN6 1383 aa10.17□□□□□ -0.78
UBAP2-208ENST00000459988 DLC1Q96QB1 1528 aa10.17□□□□□ -0.78
UBAP2-208ENST00000459988 PPP1R15AO75807 674 aaPredicted RBP10.17□□□□□ -0.78
UBAP2-208ENST00000459988 MAP3K5Q99683 1374 aa10.17□□□□□ -0.78
UBAP2-208ENST00000459988 CCDC18Q5T9S5 1454 aa10.17□□□□□ -0.78
UBAP2-208ENST00000459988 GLI3P10071 1580 aa10.16□□□□□ -0.78
UBAP2-208ENST00000459988 MYT1Q01538 1121 aa10.16□□□□□ -0.78
UBAP2-208ENST00000459988 EFCAB6Q5THR3 1501 aa10.16□□□□□ -0.78
UBAP2-208ENST00000459988 HSPA6P17066 643 aa10.15□□□□□ -0.79
UBAP2-208ENST00000459988 UBTFP17480 764 aaKnown RBP10.15□□□□□ -0.79
UBAP2-208ENST00000459988 NUP188Q5SRE5 1749 aa10.14□□□□□ -0.79
UBAP2-208ENST00000459988 ARID3CA6NKF2 412 aa10.14□□□□□ -0.79
UBAP2-208ENST00000459988 TXNDC2Q86VQ3 553 aa10.14□□□□□ -0.79
UBAP2-208ENST00000459988 C8orf37Q96NL8 207 aa10.14□□□□□ -0.79
UBAP2-208ENST00000459988 C19orf44Q9H6X5 657 aa10.14□□□□□ -0.79
UBAP2-208ENST00000459988 SPON1Q9HCB6 807 aa10.13□□□□□ -0.79
UBAP2-208ENST00000459988 EHBP1L1Q8N3D4 1523 aa10.13□□□□□ -0.79
UBAP2-208ENST00000459988 ONECUT3O60422 494 aaPredicted RBP10.13□□□□□ -0.79
UBAP2-208ENST00000459988 GJD4Q96KN9 370 aaPredicted RBP10.13□□□□□ -0.79
UBAP2-208ENST00000459988 SHANK3Q9BYB0 1731 aa10.12□□□□□ -0.79
UBAP2-208ENST00000459988 MYOM2P54296 1465 aa10.12□□□□□ -0.79
UBAP2-208ENST00000459988 CAMTA1Q9Y6Y1 1673 aa10.12□□□□□ -0.79
UBAP2-208ENST00000459988 CASZ1Q86V15 1759 aa10.12□□□□□ -0.79
UBAP2-208ENST00000459988 PIK3C2BO00750 1634 aa10.11□□□□□ -0.79
UBAP2-208ENST00000459988 ABCC5O15440 1437 aa10.11□□□□□ -0.79
UBAP2-208ENST00000459988 GGT6Q6P531 493 aa10.11□□□□□ -0.79
UBAP2-208ENST00000459988 TMEM131LA2VDJ0 1609 aa10.11□□□□□ -0.79
UBAP2-208ENST00000459988 ATF3P18847 181 aa10.1□□□□□ -0.79
UBAP2-208ENST00000459988 PLEKHG1Q9ULL1 1385 aa10.1□□□□□ -0.79
UBAP2-208ENST00000459988 KCNQ2O43526 872 aa10.09□□□□□ -0.79
UBAP2-208ENST00000459988 BRINP3Q76B58 766 aa10.09□□□□□ -0.79
UBAP2-208ENST00000459988 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.09□□□□□ -0.79
UBAP2-208ENST00000459988 SLIT2O94813 1529 aa10.09□□□□□ -0.79
UBAP2-208ENST00000459988 EIF5BO60841 1220 aaKnown RBP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms