RNA–Protein interactions for RNA: ENST00000458205.6

MLH1-216, Transcript of mutL homolog 1, humanhuman

TSL 1 (best) BASIC

Gene MLH1, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MLH1-216ENST00000458205 RIMS2Q9UQ26 1411 aa13.5□□□□□ -0.25
MLH1-216ENST00000458205 TMEM131LA2VDJ0 1609 aa13.5□□□□□ -0.25
MLH1-216ENST00000458205 HDGFP51858 240 aaKnown RBP13.49□□□□□ -0.25
MLH1-216ENST00000458205 RBM33Q96EV2 1170 aaKnown RBP13.49□□□□□ -0.25
MLH1-216ENST00000458205 SPHKAPQ2M3C7 1700 aa13.49□□□□□ -0.25
MLH1-216ENST00000458205 ZFYVE9O95405 1425 aa13.48□□□□□ -0.25
MLH1-216ENST00000458205 KDM5AP29375 1690 aaKnown RBP13.48□□□□□ -0.25
MLH1-216ENST00000458205 UBAP1LF5GYI3 381 aa13.48□□□□□ -0.25
MLH1-216ENST00000458205 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.46□□□□□ -0.25
MLH1-216ENST00000458205 SCAF1Q9H7N4 1312 aaKnown RBP13.46□□□□□ -0.26
MLH1-216ENST00000458205 CLTCL1P53675 1640 aa13.45□□□□□ -0.26
MLH1-216ENST00000458205 RGL3Q3MIN7 710 aa13.45□□□□□ -0.26
MLH1-216ENST00000458205 STRCP1A6NGW2 1772 aa13.45□□□□□ -0.26
MLH1-216ENST00000458205 TRPM2O94759 1503 aa13.45□□□□□ -0.26
MLH1-216ENST00000458205 PIP4K2BP78356 416 aa13.44□□□□□ -0.26
MLH1-216ENST00000458205 PLEKHG1Q9ULL1 1385 aa13.44□□□□□ -0.26
MLH1-216ENST00000458205 CPS1P31327 1500 aa13.43□□□□□ -0.26
MLH1-216ENST00000458205 KCNA6P17658 529 aa13.42□□□□□ -0.26
MLH1-216ENST00000458205 PROSER2Q86WR7 435 aaPredicted RBP13.42□□□□□ -0.26
MLH1-216ENST00000458205 LRRC7Q96NW7 1537 aa13.41□□□□□ -0.26
MLH1-216ENST00000458205 CCDC144AA2RUR9 1427 aa13.41□□□□□ -0.26
MLH1-216ENST00000458205 TBX22Q9Y458 520 aa13.4□□□□□ -0.26
MLH1-216ENST00000458205 TOM1O60784 492 aa13.4□□□□□ -0.26
MLH1-216ENST00000458205 ADAMTS13Q76LX8 1427 aa13.39□□□□□ -0.27
MLH1-216ENST00000458205 IQSEC2Q5JU85 1478 aa13.39□□□□□ -0.27
MLH1-216ENST00000458205 KIF1BO60333 1816 aa13.39□□□□□ -0.27
MLH1-216ENST00000458205 TMEM94Q12767 1356 aa13.39□□□□□ -0.27
MLH1-216ENST00000458205 VGFO15240 615 aaPredicted RBP13.37□□□□□ -0.27
MLH1-216ENST00000458205 AMOTL2Q9Y2J4 779 aa13.37□□□□□ -0.27
MLH1-216ENST00000458205 ACIN1Q9UKV3 1341 aaKnown RBP13.36□□□□□ -0.27
MLH1-216ENST00000458205 NEXMIFQ5QGS0 1516 aa13.36□□□□□ -0.27
MLH1-216ENST00000458205 C14orf37Q86TY3 774 aa13.35□□□□□ -0.27
MLH1-216ENST00000458205 METP08581 1390 aa13.35□□□□□ -0.27
MLH1-216ENST00000458205 HRCP23327 699 aa13.34□□□□□ -0.27
MLH1-216ENST00000458205 ADGRF5Q8IZF2 1346 aa13.34□□□□□ -0.27
MLH1-216ENST00000458205 PTPRUQ92729 1446 aa13.33□□□□□ -0.28
MLH1-216ENST00000458205 RPGRIP1LQ68CZ1 1315 aa13.33□□□□□ -0.28
MLH1-216ENST00000458205 SPATA31E1Q6ZUB1 1445 aa13.32□□□□□ -0.28
MLH1-216ENST00000458205 NRXN3Q9Y4C0 1643 aa13.32□□□□□ -0.28
MLH1-216ENST00000458205 CHD2O14647 1828 aaKnown RBP13.32□□□□□ -0.28
MLH1-216ENST00000458205 HSPA1LP34931 641 aa13.32□□□□□ -0.28
MLH1-216ENST00000458205 ANKRD30BQ9BXX2 1392 aa13.32□□□□□ -0.28
MLH1-216ENST00000458205 XIRP1Q702N8 1843 aaKnown RBP13.32□□□□□ -0.28
MLH1-216ENST00000458205 ALKQ9UM73 1620 aa13.31□□□□□ -0.28
MLH1-216ENST00000458205 SETBP1Q9Y6X0 1596 aa13.3□□□□□ -0.28
MLH1-216ENST00000458205 NKTRP30414 1462 aaKnown RBP13.3□□□□□ -0.28
MLH1-216ENST00000458205 KDM2AQ9Y2K7 1162 aa13.3□□□□□ -0.28
MLH1-216ENST00000458205 NWD1Q149M9 1564 aa13.29□□□□□ -0.28
MLH1-216ENST00000458205 MSH6P52701 1360 aa13.29□□□□□ -0.28
MLH1-216ENST00000458205 PIK3R4Q99570 1358 aa13.29□□□□□ -0.28
MLH1-216ENST00000458205 DIP2AQ14689 1571 aa13.29□□□□□ -0.28
MLH1-216ENST00000458205 TMEM132EQ6IEE7 984 aa13.29□□□□□ -0.28
MLH1-216ENST00000458205 TRIM26Q12899 539 aaPredicted RBP13.28□□□□□ -0.28
MLH1-216ENST00000458205 STK26Q9P289 416 aa13.28□□□□□ -0.28
MLH1-216ENST00000458205 PPLO60437 1756 aa13.28□□□□□ -0.28
MLH1-216ENST00000458205 DCAF11Q8TEB1 546 aa13.27□□□□□ -0.29
MLH1-216ENST00000458205 C19orf44Q9H6X5 657 aa13.26□□□□□ -0.29
MLH1-216ENST00000458205 SLAIN2Q9P270 581 aa13.26□□□□□ -0.29
MLH1-216ENST00000458205 ATF3P18847 181 aa13.25□□□□□ -0.29
MLH1-216ENST00000458205 CFAP70Q5T0N1 1121 aa13.25□□□□□ -0.29
MLH1-216ENST00000458205 ROBO2Q9HCK4 1378 aa13.24□□□□□ -0.29
MLH1-216ENST00000458205 CADPS2Q86UW7 1296 aa13.23□□□□□ -0.29
MLH1-216ENST00000458205 WAPLQ7Z5K2 1190 aa13.22□□□□□ -0.29
MLH1-216ENST00000458205 SIN3AQ96ST3 1273 aa13.22□□□□□ -0.29
MLH1-216ENST00000458205 PIK3C2GO75747 1445 aa13.22□□□□□ -0.29
MLH1-216ENST00000458205 XRN1Q8IZH2 1706 aaKnown RBP13.22□□□□□ -0.29
MLH1-216ENST00000458205 NEUROD1Q13562 356 aa13.21□□□□□ -0.29
MLH1-216ENST00000458205 SETD1AO15047 1707 aaKnown RBP13.21□□□□□ -0.3
MLH1-216ENST00000458205 IFT172Q9UG01 1749 aa13.21□□□□□ -0.3
MLH1-216ENST00000458205 C14orf93Q9H972 538 aaKnown RBP13.21□□□□□ -0.3
MLH1-216ENST00000458205 FAM135BQ49AJ0 1406 aa13.2□□□□□ -0.3
MLH1-216ENST00000458205 NCOA3Q9Y6Q9 1424 aa13.2□□□□□ -0.3
MLH1-216ENST00000458205 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.2□□□□□ -0.3
MLH1-216ENST00000458205 SAFB2Q14151 953 aaKnown RBP eCLIP13.19□□□□□ -0.3
MLH1-216ENST00000458205 DHX57Q6P158 1386 aaKnown RBP13.19□□□□□ -0.3
MLH1-216ENST00000458205 DISP3Q9P2K9 1392 aa13.19□□□□□ -0.3
MLH1-216ENST00000458205 ROBO1Q9Y6N7 1651 aa13.18□□□□□ -0.3
MLH1-216ENST00000458205 NUTM2FA1L443 756 aa13.18□□□□□ -0.3
MLH1-216ENST00000458205 ASXL1Q8IXJ9 1541 aa13.17□□□□□ -0.3
MLH1-216ENST00000458205 PLEKHH1Q9ULM0 1364 aa13.17□□□□□ -0.3
MLH1-216ENST00000458205 PTCH1Q13635 1447 aa13.17□□□□□ -0.3
MLH1-216ENST00000458205 DDX17Q92841 729 aaKnown RBP13.17□□□□□ -0.3
MLH1-216ENST00000458205 MYOM2P54296 1465 aa13.17□□□□□ -0.3
MLH1-216ENST00000458205 YTHDC2Q9H6S0 1430 aaKnown RBP13.16□□□□□ -0.3
MLH1-216ENST00000458205 ADGRL3Q9HAR2 1447 aa13.16□□□□□ -0.3
MLH1-216ENST00000458205 BRINP3Q76B58 766 aa13.16□□□□□ -0.3
MLH1-216ENST00000458205 NRXN1Q9ULB1 1477 aa13.16□□□□□ -0.3
MLH1-216ENST00000458205 PCGF6Q9BYE7 350 aa13.16□□□□□ -0.3
MLH1-216ENST00000458205 TRAK1Q9UPV9 953 aa13.16□□□□□ -0.3
MLH1-216ENST00000458205 LRPPRCP42704 1394 aaKnown RBP13.16□□□□□ -0.3
MLH1-216ENST00000458205 ABCC11Q96J66 1382 aa13.15□□□□□ -0.3
MLH1-216ENST00000458205 NALCNQ8IZF0 1738 aa13.14□□□□□ -0.31
MLH1-216ENST00000458205 L3MBTL2Q969R5 705 aa13.14□□□□□ -0.31
MLH1-216ENST00000458205 PRAM1Q96QH2 718 aa13.14□□□□□ -0.31
MLH1-216ENST00000458205 ORAI2Q96SN7 254 aa13.14□□□□□ -0.31
MLH1-216ENST00000458205 MST1RQ04912 1400 aa13.13□□□□□ -0.31
MLH1-216ENST00000458205 DCCP43146 1447 aa13.13□□□□□ -0.31
MLH1-216ENST00000458205 POGKQ9P215 609 aa13.12□□□□□ -0.31
MLH1-216ENST00000458205 NBPF1Q3BBV0 1214 aa13.11□□□□□ -0.31
MLH1-216ENST00000458205 HIRIP3Q9BW71 556 aaPredicted RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 219.2 ms