RNA–Protein interactions for RNA: ENST00000457845.4

TRAPPC12-212, Transcript of trafficking protein particle complex 12, humanhuman

TSL 4

Gene TRAPPC12, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-212ENST00000457845 CLSPNQ9HAW4 1339 aa17.18■□□□□ 0.34
TRAPPC12-212ENST00000457845 SCAF11Q99590 1463 aaKnown RBP17.18■□□□□ 0.34
TRAPPC12-212ENST00000457845 LTKP29376 864 aa17.17■□□□□ 0.34
TRAPPC12-212ENST00000457845 ANKLE2Q86XL3 938 aa17.17■□□□□ 0.34
TRAPPC12-212ENST00000457845 HDGFP51858 240 aaKnown RBP17.15■□□□□ 0.34
TRAPPC12-212ENST00000457845 TXNDC2Q86VQ3 553 aa17.15■□□□□ 0.34
TRAPPC12-212ENST00000457845 SIN3AQ96ST3 1273 aa17.15■□□□□ 0.34
TRAPPC12-212ENST00000457845 IQGAP1P46940 1657 aa17.15■□□□□ 0.34
TRAPPC12-212ENST00000457845 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.14■□□□□ 0.33
TRAPPC12-212ENST00000457845 EID1Q9Y6B2 187 aa17.14■□□□□ 0.33
TRAPPC12-212ENST00000457845 NCKAP5LQ9HCH0 1330 aa17.14■□□□□ 0.33
TRAPPC12-212ENST00000457845 ZNF326Q5BKZ1 582 aaKnown RBP17.13■□□□□ 0.33
TRAPPC12-212ENST00000457845 RGL3Q3MIN7 710 aa17.12■□□□□ 0.33
TRAPPC12-212ENST00000457845 PLEKHG1Q9ULL1 1385 aa17.11■□□□□ 0.33
TRAPPC12-212ENST00000457845 NPHP4O75161 1426 aaPredicted RBP17.11■□□□□ 0.33
TRAPPC12-212ENST00000457845 NRXN3Q9Y4C0 1643 aa17.1■□□□□ 0.33
TRAPPC12-212ENST00000457845 MYOM2P54296 1465 aa17.1■□□□□ 0.33
TRAPPC12-212ENST00000457845 VGFO15240 615 aaPredicted RBP17.09■□□□□ 0.33
TRAPPC12-212ENST00000457845 STAC3Q96MF2 364 aa17.09■□□□□ 0.33
TRAPPC12-212ENST00000457845 DMRT2Q9Y5R5 561 aa17.09■□□□□ 0.33
TRAPPC12-212ENST00000457845 SETBP1Q9Y6X0 1596 aa17.09■□□□□ 0.33
TRAPPC12-212ENST00000457845 NRXN1Q9ULB1 1477 aa17.08■□□□□ 0.32
TRAPPC12-212ENST00000457845 CCER1Q8TC90 406 aaPredicted RBP17.08■□□□□ 0.32
TRAPPC12-212ENST00000457845 SETD1AO15047 1707 aaKnown RBP17.07■□□□□ 0.32
TRAPPC12-212ENST00000457845 NEUROD1Q13562 356 aa17.07■□□□□ 0.32
TRAPPC12-212ENST00000457845 NUTM2DQ5VT03 806 aaPredicted RBP17.07■□□□□ 0.32
TRAPPC12-212ENST00000457845 PPP1R15AO75807 674 aaPredicted RBP17.06■□□□□ 0.32
TRAPPC12-212ENST00000457845 DIP2AQ14689 1571 aa17.06■□□□□ 0.32
TRAPPC12-212ENST00000457845 ADAMTS13Q76LX8 1427 aa17.05■□□□□ 0.32
TRAPPC12-212ENST00000457845 ADGRF5Q8IZF2 1346 aa17.04■□□□□ 0.32
TRAPPC12-212ENST00000457845 DCAF11Q8TEB1 546 aa17.04■□□□□ 0.32
TRAPPC12-212ENST00000457845 L3MBTL2Q969R5 705 aa17.04■□□□□ 0.32
TRAPPC12-212ENST00000457845 CHD2O14647 1828 aaKnown RBP17.04■□□□□ 0.32
TRAPPC12-212ENST00000457845 PIK3C2GO75747 1445 aa17.04■□□□□ 0.32
TRAPPC12-212ENST00000457845 TBX22Q9Y458 520 aa17.02■□□□□ 0.32
TRAPPC12-212ENST00000457845 LAMC1P11047 1609 aa17.02■□□□□ 0.31
TRAPPC12-212ENST00000457845 ALKQ9UM73 1620 aa17.02■□□□□ 0.31
TRAPPC12-212ENST00000457845 KIAA1210Q9ULL0 1709 aa17.01■□□□□ 0.31
TRAPPC12-212ENST00000457845 TIMELESSQ9UNS1 1208 aa17.01■□□□□ 0.31
TRAPPC12-212ENST00000457845 STRCP1A6NGW2 1772 aa17■□□□□ 0.31
TRAPPC12-212ENST00000457845 TONSLQ96HA7 1378 aa17■□□□□ 0.31
TRAPPC12-212ENST00000457845 SLC26A8Q96RN1 970 aa16.99■□□□□ 0.31
TRAPPC12-212ENST00000457845 KDM2AQ9Y2K7 1162 aa16.98■□□□□ 0.31
TRAPPC12-212ENST00000457845 PIK3R4Q99570 1358 aa16.98■□□□□ 0.31
TRAPPC12-212ENST00000457845 PRAG1Q86YV5 1406 aa16.97■□□□□ 0.31
TRAPPC12-212ENST00000457845 C14orf93Q9H972 538 aaKnown RBP16.97■□□□□ 0.31
TRAPPC12-212ENST00000457845 NWD1Q149M9 1564 aa16.97■□□□□ 0.31
TRAPPC12-212ENST00000457845 BCANQ96GW7 911 aa16.96■□□□□ 0.31
TRAPPC12-212ENST00000457845 XRN1Q8IZH2 1706 aaKnown RBP16.95■□□□□ 0.3
TRAPPC12-212ENST00000457845 TRPM1Q7Z4N2 1603 aa16.95■□□□□ 0.3
TRAPPC12-212ENST00000457845 LTBP4Q8N2S1 1624 aa16.95■□□□□ 0.3
TRAPPC12-212ENST00000457845 ASXL1Q8IXJ9 1541 aa16.95■□□□□ 0.3
TRAPPC12-212ENST00000457845 METP08581 1390 aa16.94■□□□□ 0.3
TRAPPC12-212ENST00000457845 SENP3Q9H4L4 574 aaPredicted RBP16.94■□□□□ 0.3
TRAPPC12-212ENST00000457845 CFAP70Q5T0N1 1121 aa16.93■□□□□ 0.3
TRAPPC12-212ENST00000457845 PTPRUQ92729 1446 aa16.93■□□□□ 0.3
TRAPPC12-212ENST00000457845 ADGRB1O14514 1584 aa16.93■□□□□ 0.3
TRAPPC12-212ENST00000457845 KCNA6P17658 529 aa16.92■□□□□ 0.3
TRAPPC12-212ENST00000457845 KNDC1Q76NI1 1749 aa16.92■□□□□ 0.3
TRAPPC12-212ENST00000457845 ZNF335Q9H4Z2 1342 aaPredicted RBP16.92■□□□□ 0.3
TRAPPC12-212ENST00000457845 XIRP1Q702N8 1843 aaKnown RBP16.91■□□□□ 0.3
TRAPPC12-212ENST00000457845 NBPF8Q3BBV2 869 aa16.9■□□□□ 0.3
TRAPPC12-212ENST00000457845 CPS1P31327 1500 aa16.9■□□□□ 0.3
TRAPPC12-212ENST00000457845 NKTRP30414 1462 aaKnown RBP16.89■□□□□ 0.29
TRAPPC12-212ENST00000457845 TECPR2O15040 1411 aa16.87■□□□□ 0.29
TRAPPC12-212ENST00000457845 AMOTL2Q9Y2J4 779 aa16.87■□□□□ 0.29
TRAPPC12-212ENST00000457845 LRPPRCP42704 1394 aaKnown RBP16.87■□□□□ 0.29
TRAPPC12-212ENST00000457845 ABCC11Q96J66 1382 aa16.87■□□□□ 0.29
TRAPPC12-212ENST00000457845 YTHDC2Q9H6S0 1430 aaKnown RBP16.87■□□□□ 0.29
TRAPPC12-212ENST00000457845 TMEM132EQ6IEE7 984 aa16.86■□□□□ 0.29
TRAPPC12-212ENST00000457845 RALGAPBQ86X10 1494 aa16.86■□□□□ 0.29
TRAPPC12-212ENST00000457845 NBPF1Q3BBV0 1214 aa16.85■□□□□ 0.29
TRAPPC12-212ENST00000457845 GPRASP1Q5JY77 1395 aa16.85■□□□□ 0.29
TRAPPC12-212ENST00000457845 LRRC7Q96NW7 1537 aa16.85■□□□□ 0.29
TRAPPC12-212ENST00000457845 DLC1Q96QB1 1528 aa16.85■□□□□ 0.29
TRAPPC12-212ENST00000457845 PTCH1Q13635 1447 aa16.84■□□□□ 0.29
TRAPPC12-212ENST00000457845 ARHGEF28Q8N1W1 1705 aaKnown RBP16.84■□□□□ 0.29
TRAPPC12-212ENST00000457845 SIRT1Q96EB6 747 aa16.83■□□□□ 0.28
TRAPPC12-212ENST00000457845 IQSEC2Q5JU85 1478 aa16.81■□□□□ 0.28
TRAPPC12-212ENST00000457845 NCOA3Q9Y6Q9 1424 aa16.81■□□□□ 0.28
TRAPPC12-212ENST00000457845 FAM135BQ49AJ0 1406 aa16.8■□□□□ 0.28
TRAPPC12-212ENST00000457845 ROBO2Q9HCK4 1378 aa16.8■□□□□ 0.28
TRAPPC12-212ENST00000457845 ROCK2O75116 1388 aaKnown RBP16.79■□□□□ 0.28
TRAPPC12-212ENST00000457845 PROSER2Q86WR7 435 aaPredicted RBP16.79■□□□□ 0.28
TRAPPC12-212ENST00000457845 TMEM94Q12767 1356 aa16.78■□□□□ 0.28
TRAPPC12-212ENST00000457845 STK26Q9P289 416 aa16.78■□□□□ 0.28
TRAPPC12-212ENST00000457845 NALCNQ8IZF0 1738 aa16.78■□□□□ 0.28
TRAPPC12-212ENST00000457845 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.78■□□□□ 0.28
TRAPPC12-212ENST00000457845 CERKQ8TCT0 537 aa16.76■□□□□ 0.27
TRAPPC12-212ENST00000457845 TRAK1Q9UPV9 953 aa16.76■□□□□ 0.27
TRAPPC12-212ENST00000457845 PLEKHH1Q9ULM0 1364 aa16.74■□□□□ 0.27
TRAPPC12-212ENST00000457845 ADGRL3Q9HAR2 1447 aa16.73■□□□□ 0.27
TRAPPC12-212ENST00000457845 WAPLQ7Z5K2 1190 aa16.73■□□□□ 0.27
TRAPPC12-212ENST00000457845 CARD11Q9BXL7 1154 aa16.73■□□□□ 0.27
TRAPPC12-212ENST00000457845 QRICH2Q9H0J4 1663 aa16.72■□□□□ 0.27
TRAPPC12-212ENST00000457845 RBM33Q96EV2 1170 aaKnown RBP16.72■□□□□ 0.27
TRAPPC12-212ENST00000457845 PRAM1Q96QH2 718 aa16.72■□□□□ 0.27
TRAPPC12-212ENST00000457845 ADGRB2O60241 1585 aa16.72■□□□□ 0.27
TRAPPC12-212ENST00000457845 C19orf44Q9H6X5 657 aa16.71■□□□□ 0.27
TRAPPC12-212ENST00000457845 DCCP43146 1447 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms