RNA–Protein interactions for RNA: ENST00000457463.1

CNOT3-205, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 3

Gene CNOT3, Length 1,269 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-205ENST00000457463 ZNF335Q9H4Z2 1342 aaPredicted RBP18.05■□□□□ 0.48
CNOT3-205ENST00000457463 ZNF326Q5BKZ1 582 aaKnown RBP18.03■□□□□ 0.48
CNOT3-205ENST00000457463 IQGAP1P46940 1657 aa18.02■□□□□ 0.47
CNOT3-205ENST00000457463 CCDC144AA2RUR9 1427 aa18.01■□□□□ 0.47
CNOT3-205ENST00000457463 ANKRD30BQ9BXX2 1392 aa18.01■□□□□ 0.47
CNOT3-205ENST00000457463 SLC26A8Q96RN1 970 aa18■□□□□ 0.47
CNOT3-205ENST00000457463 LTBP4Q8N2S1 1624 aa17.99■□□□□ 0.47
CNOT3-205ENST00000457463 PPP1R15AO75807 674 aaPredicted RBP17.99■□□□□ 0.47
CNOT3-205ENST00000457463 RGL3Q3MIN7 710 aa17.98■□□□□ 0.47
CNOT3-205ENST00000457463 BCANQ96GW7 911 aa17.98■□□□□ 0.47
CNOT3-205ENST00000457463 SPATA31E1Q6ZUB1 1445 aa17.98■□□□□ 0.47
CNOT3-205ENST00000457463 PLEKHG1Q9ULL1 1385 aa17.97■□□□□ 0.47
CNOT3-205ENST00000457463 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.97■□□□□ 0.47
CNOT3-205ENST00000457463 PCGF6Q9BYE7 350 aa17.97■□□□□ 0.47
CNOT3-205ENST00000457463 KIF1BO60333 1816 aa17.97■□□□□ 0.47
CNOT3-205ENST00000457463 NEXMIFQ5QGS0 1516 aa17.97■□□□□ 0.47
CNOT3-205ENST00000457463 HDGFP51858 240 aaKnown RBP17.96■□□□□ 0.47
CNOT3-205ENST00000457463 CERKQ8TCT0 537 aa17.95■□□□□ 0.46
CNOT3-205ENST00000457463 ADAMTS13Q76LX8 1427 aa17.94■□□□□ 0.46
CNOT3-205ENST00000457463 DHX57Q6P158 1386 aaKnown RBP17.91■□□□□ 0.46
CNOT3-205ENST00000457463 STRCP1A6NGW2 1772 aa17.91■□□□□ 0.46
CNOT3-205ENST00000457463 RPGRIP1LQ68CZ1 1315 aa17.9■□□□□ 0.46
CNOT3-205ENST00000457463 ADGRF5Q8IZF2 1346 aa17.9■□□□□ 0.46
CNOT3-205ENST00000457463 NRXN3Q9Y4C0 1643 aa17.9■□□□□ 0.46
CNOT3-205ENST00000457463 SIN3AQ96ST3 1273 aa17.88■□□□□ 0.45
CNOT3-205ENST00000457463 TBX22Q9Y458 520 aa17.88■□□□□ 0.45
CNOT3-205ENST00000457463 VGFO15240 615 aaPredicted RBP17.87■□□□□ 0.45
CNOT3-205ENST00000457463 PPLO60437 1756 aa17.86■□□□□ 0.45
CNOT3-205ENST00000457463 RBM33Q96EV2 1170 aaKnown RBP17.86■□□□□ 0.45
CNOT3-205ENST00000457463 SETBP1Q9Y6X0 1596 aa17.86■□□□□ 0.45
CNOT3-205ENST00000457463 METP08581 1390 aa17.85■□□□□ 0.45
CNOT3-205ENST00000457463 KCNA6P17658 529 aa17.85■□□□□ 0.45
CNOT3-205ENST00000457463 PTPRUQ92729 1446 aa17.85■□□□□ 0.45
CNOT3-205ENST00000457463 CPS1P31327 1500 aa17.84■□□□□ 0.45
CNOT3-205ENST00000457463 LRRC7Q96NW7 1537 aa17.83■□□□□ 0.45
CNOT3-205ENST00000457463 IFT172Q9UG01 1749 aa17.83■□□□□ 0.44
CNOT3-205ENST00000457463 KDM2AQ9Y2K7 1162 aa17.81■□□□□ 0.44
CNOT3-205ENST00000457463 DIP2AQ14689 1571 aa17.81■□□□□ 0.44
CNOT3-205ENST00000457463 NWD1Q149M9 1564 aa17.8■□□□□ 0.44
CNOT3-205ENST00000457463 NEUROD1Q13562 356 aa17.8■□□□□ 0.44
CNOT3-205ENST00000457463 DCAF11Q8TEB1 546 aa17.8■□□□□ 0.44
CNOT3-205ENST00000457463 AMOTL2Q9Y2J4 779 aa17.8■□□□□ 0.44
CNOT3-205ENST00000457463 ALKQ9UM73 1620 aa17.8■□□□□ 0.44
CNOT3-205ENST00000457463 ILDR1Q86SU0 546 aaPredicted RBP17.79■□□□□ 0.44
CNOT3-205ENST00000457463 CHD2O14647 1828 aaKnown RBP17.79■□□□□ 0.44
CNOT3-205ENST00000457463 TMEM94Q12767 1356 aa17.79■□□□□ 0.44
CNOT3-205ENST00000457463 PROSER2Q86WR7 435 aaPredicted RBP17.78■□□□□ 0.44
CNOT3-205ENST00000457463 PIK3C2GO75747 1445 aa17.78■□□□□ 0.44
CNOT3-205ENST00000457463 SETD1AO15047 1707 aaKnown RBP17.78■□□□□ 0.44
CNOT3-205ENST00000457463 PIK3R4Q99570 1358 aa17.78■□□□□ 0.44
CNOT3-205ENST00000457463 MYOM2P54296 1465 aa17.77■□□□□ 0.44
CNOT3-205ENST00000457463 NRXN1Q9ULB1 1477 aa17.77■□□□□ 0.44
CNOT3-205ENST00000457463 FBXO41Q8TF61 875 aa17.77■□□□□ 0.44
CNOT3-205ENST00000457463 IQSEC2Q5JU85 1478 aa17.76■□□□□ 0.43
CNOT3-205ENST00000457463 CFAP70Q5T0N1 1121 aa17.76■□□□□ 0.43
CNOT3-205ENST00000457463 TMEM132EQ6IEE7 984 aa17.76■□□□□ 0.43
CNOT3-205ENST00000457463 NKTRP30414 1462 aaKnown RBP17.75■□□□□ 0.43
CNOT3-205ENST00000457463 XIRP1Q702N8 1843 aaKnown RBP17.75■□□□□ 0.43
CNOT3-205ENST00000457463 ASXL1Q8IXJ9 1541 aa17.74■□□□□ 0.43
CNOT3-205ENST00000457463 C14orf93Q9H972 538 aaKnown RBP17.74■□□□□ 0.43
CNOT3-205ENST00000457463 UBAP1LF5GYI3 381 aa17.73■□□□□ 0.43
CNOT3-205ENST00000457463 L3MBTL2Q969R5 705 aa17.73■□□□□ 0.43
CNOT3-205ENST00000457463 XRN1Q8IZH2 1706 aaKnown RBP17.72■□□□□ 0.43
CNOT3-205ENST00000457463 STK26Q9P289 416 aa17.71■□□□□ 0.43
CNOT3-205ENST00000457463 ROBO2Q9HCK4 1378 aa17.7■□□□□ 0.42
CNOT3-205ENST00000457463 PIP4K2BP78356 416 aa17.67■□□□□ 0.42
CNOT3-205ENST00000457463 LRPPRCP42704 1394 aaKnown RBP17.66■□□□□ 0.42
CNOT3-205ENST00000457463 C14orf37Q86TY3 774 aa17.66■□□□□ 0.42
CNOT3-205ENST00000457463 YTHDC2Q9H6S0 1430 aaKnown RBP17.65■□□□□ 0.42
CNOT3-205ENST00000457463 TOM1O60784 492 aa17.65■□□□□ 0.42
CNOT3-205ENST00000457463 WAPLQ7Z5K2 1190 aa17.65■□□□□ 0.42
CNOT3-205ENST00000457463 STAC3Q96MF2 364 aa17.65■□□□□ 0.42
CNOT3-205ENST00000457463 ADGRB1O14514 1584 aa17.65■□□□□ 0.42
CNOT3-205ENST00000457463 PLEKHH1Q9ULM0 1364 aa17.65■□□□□ 0.42
CNOT3-205ENST00000457463 PTCH1Q13635 1447 aa17.64■□□□□ 0.42
CNOT3-205ENST00000457463 PRAG1Q86YV5 1406 aa17.64■□□□□ 0.42
CNOT3-205ENST00000457463 SCAF1Q9H7N4 1312 aaKnown RBP17.64■□□□□ 0.41
CNOT3-205ENST00000457463 MSH6P52701 1360 aa17.64■□□□□ 0.41
CNOT3-205ENST00000457463 NBPF1Q3BBV0 1214 aa17.63■□□□□ 0.41
CNOT3-205ENST00000457463 ABCC11Q96J66 1382 aa17.63■□□□□ 0.41
CNOT3-205ENST00000457463 NCOA3Q9Y6Q9 1424 aa17.63■□□□□ 0.41
CNOT3-205ENST00000457463 C19orf44Q9H6X5 657 aa17.62■□□□□ 0.41
CNOT3-205ENST00000457463 TECPR2O15040 1411 aa17.62■□□□□ 0.41
CNOT3-205ENST00000457463 NBPF8Q3BBV2 869 aa17.61■□□□□ 0.41
CNOT3-205ENST00000457463 LAMC1P11047 1609 aa17.61■□□□□ 0.41
CNOT3-205ENST00000457463 TRAK1Q9UPV9 953 aa17.6■□□□□ 0.41
CNOT3-205ENST00000457463 TONSLQ96HA7 1378 aa17.6■□□□□ 0.41
CNOT3-205ENST00000457463 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.59■□□□□ 0.41
CNOT3-205ENST00000457463 CCER1Q8TC90 406 aaPredicted RBP17.59■□□□□ 0.41
CNOT3-205ENST00000457463 ADGRL3Q9HAR2 1447 aa17.58■□□□□ 0.41
CNOT3-205ENST00000457463 SAFB2Q14151 953 aaKnown RBP eCLIP17.58■□□□□ 0.4
CNOT3-205ENST00000457463 NALCNQ8IZF0 1738 aa17.58■□□□□ 0.4
CNOT3-205ENST00000457463 PRAM1Q96QH2 718 aa17.57■□□□□ 0.4
CNOT3-205ENST00000457463 KNDC1Q76NI1 1749 aa17.57■□□□□ 0.4
CNOT3-205ENST00000457463 ATF3P18847 181 aa17.56■□□□□ 0.4
CNOT3-205ENST00000457463 SLAIN2Q9P270 581 aa17.56■□□□□ 0.4
CNOT3-205ENST00000457463 HSPA1LP34931 641 aa17.55■□□□□ 0.4
CNOT3-205ENST00000457463 CADPS2Q86UW7 1296 aa17.55■□□□□ 0.4
CNOT3-205ENST00000457463 SIRT1Q96EB6 747 aa17.55■□□□□ 0.4
CNOT3-205ENST00000457463 FAM135BQ49AJ0 1406 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms