RNA–Protein interactions for RNA: ENST00000457215.5

ITM2C-206, Transcript of integral membrane protein 2C, humanhuman

TSL 4

Gene ITM2C, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2C-206ENST00000457215 CPS1P31327 1500 aa24.46■■□□□ 1.51
ITM2C-206ENST00000457215 FOXD1Q16676 465 aa24.44■■□□□ 1.5
ITM2C-206ENST00000457215 RAB3GAP2Q9H2M9 1393 aa24.42■■□□□ 1.5
ITM2C-206ENST00000457215 PLEKHG1Q9ULL1 1385 aa24.42■■□□□ 1.5
ITM2C-206ENST00000457215 SLC26A8Q96RN1 970 aa24.42■■□□□ 1.5
ITM2C-206ENST00000457215 MPHOSPH9Q99550 1183 aa24.42■■□□□ 1.5
ITM2C-206ENST00000457215 NUTM2DQ5VT03 806 aaPredicted RBP24.41■■□□□ 1.5
ITM2C-206ENST00000457215 SENP3Q9H4L4 574 aaPredicted RBP24.4■■□□□ 1.5
ITM2C-206ENST00000457215 LRRC7Q96NW7 1537 aa24.4■■□□□ 1.5
ITM2C-206ENST00000457215 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.38■■□□□ 1.49
ITM2C-206ENST00000457215 HDGFP51858 240 aaKnown RBP24.37■■□□□ 1.49
ITM2C-206ENST00000457215 ADAMTS13Q76LX8 1427 aa24.36■■□□□ 1.49
ITM2C-206ENST00000457215 PPP1R15AO75807 674 aaPredicted RBP24.35■■□□□ 1.49
ITM2C-206ENST00000457215 KIF1BO60333 1816 aa24.35■■□□□ 1.49
ITM2C-206ENST00000457215 KCNA6P17658 529 aa24.33■■□□□ 1.49
ITM2C-206ENST00000457215 NEXMIFQ5QGS0 1516 aa24.33■■□□□ 1.49
ITM2C-206ENST00000457215 ALKQ9UM73 1620 aa24.32■■□□□ 1.48
ITM2C-206ENST00000457215 TBX22Q9Y458 520 aa24.32■■□□□ 1.48
ITM2C-206ENST00000457215 XIRP1Q702N8 1843 aaKnown RBP24.32■■□□□ 1.48
ITM2C-206ENST00000457215 ACIN1Q9UKV3 1341 aaKnown RBP24.32■■□□□ 1.48
ITM2C-206ENST00000457215 NWD1Q149M9 1564 aa24.31■■□□□ 1.48
ITM2C-206ENST00000457215 ZNF326Q5BKZ1 582 aaKnown RBP24.31■■□□□ 1.48
ITM2C-206ENST00000457215 BCANQ96GW7 911 aa24.31■■□□□ 1.48
ITM2C-206ENST00000457215 NRXN3Q9Y4C0 1643 aa24.31■■□□□ 1.48
ITM2C-206ENST00000457215 UBAP1LF5GYI3 381 aa24.3■■□□□ 1.48
ITM2C-206ENST00000457215 CHD2O14647 1828 aaKnown RBP24.29■■□□□ 1.48
ITM2C-206ENST00000457215 HRCP23327 699 aa24.28■■□□□ 1.48
ITM2C-206ENST00000457215 SETBP1Q9Y6X0 1596 aa24.26■■□□□ 1.47
ITM2C-206ENST00000457215 DIP2AQ14689 1571 aa24.25■■□□□ 1.47
ITM2C-206ENST00000457215 SPATA31E1Q6ZUB1 1445 aa24.25■■□□□ 1.47
ITM2C-206ENST00000457215 CCDC144AA2RUR9 1427 aa24.24■■□□□ 1.47
ITM2C-206ENST00000457215 TMEM94Q12767 1356 aa24.23■■□□□ 1.47
ITM2C-206ENST00000457215 PTPRUQ92729 1446 aa24.23■■□□□ 1.47
ITM2C-206ENST00000457215 NKTRP30414 1462 aaKnown RBP24.23■■□□□ 1.47
ITM2C-206ENST00000457215 RBM33Q96EV2 1170 aaKnown RBP24.22■■□□□ 1.47
ITM2C-206ENST00000457215 PPLO60437 1756 aa24.21■■□□□ 1.47
ITM2C-206ENST00000457215 RPGRIP1LQ68CZ1 1315 aa24.21■■□□□ 1.47
ITM2C-206ENST00000457215 PIK3R4Q99570 1358 aa24.2■■□□□ 1.46
ITM2C-206ENST00000457215 TOM1O60784 492 aa24.2■■□□□ 1.46
ITM2C-206ENST00000457215 PROSER2Q86WR7 435 aaPredicted RBP24.2■■□□□ 1.46
ITM2C-206ENST00000457215 METP08581 1390 aa24.18■■□□□ 1.46
ITM2C-206ENST00000457215 ANKRD30BQ9BXX2 1392 aa24.17■■□□□ 1.46
ITM2C-206ENST00000457215 VGFO15240 615 aaPredicted RBP24.16■■□□□ 1.46
ITM2C-206ENST00000457215 PIP4K2BP78356 416 aa24.16■■□□□ 1.46
ITM2C-206ENST00000457215 SETD1AO15047 1707 aaKnown RBP24.15■■□□□ 1.46
ITM2C-206ENST00000457215 RGL3Q3MIN7 710 aa24.15■■□□□ 1.46
ITM2C-206ENST00000457215 AMOTL2Q9Y2J4 779 aa24.15■■□□□ 1.46
ITM2C-206ENST00000457215 IFT172Q9UG01 1749 aa24.15■■□□□ 1.46
ITM2C-206ENST00000457215 XRN1Q8IZH2 1706 aaKnown RBP24.13■■□□□ 1.45
ITM2C-206ENST00000457215 ADGRF5Q8IZF2 1346 aa24.12■■□□□ 1.45
ITM2C-206ENST00000457215 SCAF1Q9H7N4 1312 aaKnown RBP24.09■■□□□ 1.45
ITM2C-206ENST00000457215 NCOA3Q9Y6Q9 1424 aa24.08■■□□□ 1.44
ITM2C-206ENST00000457215 HSPA1LP34931 641 aa24.07■■□□□ 1.44
ITM2C-206ENST00000457215 MSH6P52701 1360 aa24.03■■□□□ 1.44
ITM2C-206ENST00000457215 PIK3C2GO75747 1445 aa24.02■■□□□ 1.44
ITM2C-206ENST00000457215 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.01■■□□□ 1.43
ITM2C-206ENST00000457215 NRXN1Q9ULB1 1477 aa24.01■■□□□ 1.43
ITM2C-206ENST00000457215 FAM135BQ49AJ0 1406 aa24.01■■□□□ 1.43
ITM2C-206ENST00000457215 PRAG1Q86YV5 1406 aa24■■□□□ 1.43
ITM2C-206ENST00000457215 ASXL1Q8IXJ9 1541 aa24■■□□□ 1.43
ITM2C-206ENST00000457215 C19orf44Q9H6X5 657 aa23.99■■□□□ 1.43
ITM2C-206ENST00000457215 ROBO2Q9HCK4 1378 aa23.99■■□□□ 1.43
ITM2C-206ENST00000457215 MYOM2P54296 1465 aa23.99■■□□□ 1.43
ITM2C-206ENST00000457215 SLAIN2Q9P270 581 aa23.97■■□□□ 1.43
ITM2C-206ENST00000457215 PTCH1Q13635 1447 aa23.96■■□□□ 1.43
ITM2C-206ENST00000457215 ROBO1Q9Y6N7 1651 aa23.95■■□□□ 1.43
ITM2C-206ENST00000457215 DHX57Q6P158 1386 aaKnown RBP23.95■■□□□ 1.42
ITM2C-206ENST00000457215 C14orf37Q86TY3 774 aa23.94■■□□□ 1.42
ITM2C-206ENST00000457215 C14orf93Q9H972 538 aaKnown RBP23.94■■□□□ 1.42
ITM2C-206ENST00000457215 TMEM132EQ6IEE7 984 aa23.93■■□□□ 1.42
ITM2C-206ENST00000457215 NALCNQ8IZF0 1738 aa23.93■■□□□ 1.42
ITM2C-206ENST00000457215 TRIM26Q12899 539 aaPredicted RBP23.92■■□□□ 1.42
ITM2C-206ENST00000457215 ADGRL3Q9HAR2 1447 aa23.92■■□□□ 1.42
ITM2C-206ENST00000457215 CFAP70Q5T0N1 1121 aa23.91■■□□□ 1.42
ITM2C-206ENST00000457215 CADPS2Q86UW7 1296 aa23.91■■□□□ 1.42
ITM2C-206ENST00000457215 DCCP43146 1447 aa23.91■■□□□ 1.42
ITM2C-206ENST00000457215 LRPPRCP42704 1394 aaKnown RBP23.91■■□□□ 1.42
ITM2C-206ENST00000457215 TECPR2O15040 1411 aa23.9■■□□□ 1.42
ITM2C-206ENST00000457215 ATF3P18847 181 aa23.89■■□□□ 1.41
ITM2C-206ENST00000457215 DCAF11Q8TEB1 546 aa23.89■■□□□ 1.41
ITM2C-206ENST00000457215 ABCC11Q96J66 1382 aa23.88■■□□□ 1.41
ITM2C-206ENST00000457215 MST1RQ04912 1400 aa23.87■■□□□ 1.41
ITM2C-206ENST00000457215 STK26Q9P289 416 aa23.87■■□□□ 1.41
ITM2C-206ENST00000457215 KDM2AQ9Y2K7 1162 aa23.87■■□□□ 1.41
ITM2C-206ENST00000457215 YTHDC2Q9H6S0 1430 aaKnown RBP23.86■■□□□ 1.41
ITM2C-206ENST00000457215 KNDC1Q76NI1 1749 aa23.86■■□□□ 1.41
ITM2C-206ENST00000457215 LAMC1P11047 1609 aa23.84■■□□□ 1.41
ITM2C-206ENST00000457215 PLEKHH1Q9ULM0 1364 aa23.84■■□□□ 1.41
ITM2C-206ENST00000457215 WAPLQ7Z5K2 1190 aa23.84■■□□□ 1.41
ITM2C-206ENST00000457215 ADGRB1O14514 1584 aa23.83■■□□□ 1.41
ITM2C-206ENST00000457215 BRINP3Q76B58 766 aa23.82■■□□□ 1.4
ITM2C-206ENST00000457215 STAC3Q96MF2 364 aa23.82■■□□□ 1.4
ITM2C-206ENST00000457215 SIN3AQ96ST3 1273 aa23.81■■□□□ 1.4
ITM2C-206ENST00000457215 SIRT1Q96EB6 747 aa23.79■■□□□ 1.4
ITM2C-206ENST00000457215 PHLPP1O60346 1717 aa23.79■■□□□ 1.4
ITM2C-206ENST00000457215 DISP3Q9P2K9 1392 aa23.78■■□□□ 1.4
ITM2C-206ENST00000457215 COL16A1Q07092 1604 aaPredicted RBP23.77■■□□□ 1.4
ITM2C-206ENST00000457215 AHDC1Q5TGY3 1603 aaPredicted RBP23.77■■□□□ 1.4
ITM2C-206ENST00000457215 C1orf167Q5SNV9 1468 aa23.77■■□□□ 1.4
ITM2C-206ENST00000457215 MED1Q15648 1581 aaPredicted RBP23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms