RNA–Protein interactions for RNA: ENST00000457215.5

ITM2C-206, Transcript of integral membrane protein 2C, humanhuman

TSL 4

Gene ITM2C, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2C-206ENST00000457215 NISCHQ9Y2I1 1504 aa40.15■■■■■ 4.02
ITM2C-206ENST00000457215 CCDC180Q9P1Z9 1646 aa35.69■■■■□ 3.3
ITM2C-206ENST00000457215 ABCC9O60706 1549 aa35.11■■■■□ 3.21
ITM2C-206ENST00000457215 RB1CC1Q8TDY2 1594 aa33.65■■■□□ 2.98
ITM2C-206ENST00000457215 NACADO15069 1562 aa33.6■■■□□ 2.97
ITM2C-206ENST00000457215 DCAF8L2P0C7V8 631 aa33.53■■■□□ 2.96
ITM2C-206ENST00000457215 ZCCHC6Q5VYS8 1495 aaKnown RBP33.41■■■□□ 2.94
ITM2C-206ENST00000457215 MYO15BQ96JP2 1530 aa33.38■■■□□ 2.93
ITM2C-206ENST00000457215 DCAF1Q9Y4B6 1507 aa33.19■■■□□ 2.9
ITM2C-206ENST00000457215 UNC13AQ9UPW8 1703 aa32.98■■■□□ 2.87
ITM2C-206ENST00000457215 PABPN1Q86U42 306 aaKnown RBP eCLIP32.81■■■□□ 2.84
ITM2C-206ENST00000457215 BICRAQ9NZM4 1560 aa32.77■■■□□ 2.84
ITM2C-206ENST00000457215 SCRIBQ14160 1630 aa32.59■■■□□ 2.81
ITM2C-206ENST00000457215 DNAJC5BQ9UF47 199 aa32.49■■■□□ 2.79
ITM2C-206ENST00000457215 SHROOM4Q9ULL8 1493 aa32.27■■■□□ 2.76
ITM2C-206ENST00000457215 EIF4G1Q04637 1599 aaKnown RBP31.85■■■□□ 2.69
ITM2C-206ENST00000457215 CC2D2AQ9P2K1 1620 aa31.75■■■□□ 2.67
ITM2C-206ENST00000457215 CECR2Q9BXF3 1484 aa31.54■■■□□ 2.64
ITM2C-206ENST00000457215 SMARCA4P51532 1647 aa31.16■■■□□ 2.58
ITM2C-206ENST00000457215 BAZ1AQ9NRL2 1556 aaPredicted RBP31.07■■■□□ 2.56
ITM2C-206ENST00000457215 NCAPD3P42695 1498 aa31.06■■■□□ 2.56
ITM2C-206ENST00000457215 ATAD2BQ9ULI0 1458 aa31.06■■■□□ 2.56
ITM2C-206ENST00000457215 MROH2BQ7Z745 1585 aa30.97■■■□□ 2.55
ITM2C-206ENST00000457215 SMARCA2P51531 1590 aa30.93■■■□□ 2.54
ITM2C-206ENST00000457215 PEG3Q9GZU2 1588 aa30.88■■■□□ 2.53
ITM2C-206ENST00000457215 HMGXB3Q12766 1538 aa30.85■■■□□ 2.53
ITM2C-206ENST00000457215 BAZ1BQ9UIG0 1483 aaKnown RBP30.73■■■□□ 2.51
ITM2C-206ENST00000457215 WIZO95785 1651 aa30.62■■■□□ 2.49
ITM2C-206ENST00000457215 RSF1Q96T23 1441 aaPredicted RBP30.56■■■□□ 2.48
ITM2C-206ENST00000457215 NESP48681 1621 aa30.4■■■□□ 2.46
ITM2C-206ENST00000457215 TOP2AP11388 1531 aaKnown RBP30.24■■■□□ 2.43
ITM2C-206ENST00000457215 LAMC3Q9Y6N6 1575 aa30.2■■■□□ 2.43
ITM2C-206ENST00000457215 ERCC6Q03468 1493 aa30.19■■■□□ 2.42
ITM2C-206ENST00000457215 CADPSQ9ULU8 1353 aa30.13■■■□□ 2.41
ITM2C-206ENST00000457215 KIF21AQ7Z4S6 1674 aa29.98■■■□□ 2.39
ITM2C-206ENST00000457215 PDS5BQ9NTI5 1447 aa29.98■■■□□ 2.39
ITM2C-206ENST00000457215 CUX2O14529 1486 aa29.96■■■□□ 2.39
ITM2C-206ENST00000457215 CFTRP13569 1480 aa29.93■■■□□ 2.38
ITM2C-206ENST00000457215 THOC2Q8NI27 1593 aaKnown RBP29.93■■■□□ 2.38
ITM2C-206ENST00000457215 CCDC88BA6NC98 1476 aa29.93■■■□□ 2.38
ITM2C-206ENST00000457215 FANCD2Q9BXW9 1451 aa29.77■■■□□ 2.36
ITM2C-206ENST00000457215 MRC2Q9UBG0 1479 aa29.72■■■□□ 2.35
ITM2C-206ENST00000457215 CEP164Q9UPV0 1460 aa29.71■■■□□ 2.35
ITM2C-206ENST00000457215 WDR62O43379 1518 aa29.65■■■□□ 2.34
ITM2C-206ENST00000457215 PRDM2Q13029 1718 aa29.64■■■□□ 2.34
ITM2C-206ENST00000457215 SUPT5HO00267 1087 aaKnown RBP29.61■■■□□ 2.33
ITM2C-206ENST00000457215 URB2Q14146 1524 aaKnown RBP29.53■■■□□ 2.32
ITM2C-206ENST00000457215 TOPBP1Q92547 1522 aa29.3■■■□□ 2.28
ITM2C-206ENST00000457215 DNAJC5Q9H3Z4 198 aa29.27■■■□□ 2.28
ITM2C-206ENST00000457215 DNMBPQ6XZF7 1577 aa29.22■■■□□ 2.27
ITM2C-206ENST00000457215 ABCC8Q09428 1581 aa29.21■■■□□ 2.27
ITM2C-206ENST00000457215 IFT140Q96RY7 1462 aa29.1■■■□□ 2.25
ITM2C-206ENST00000457215 ZNF608Q9ULD9 1512 aaPredicted RBP29.06■■■□□ 2.24
ITM2C-206ENST00000457215 CUX1P39880 1505 aa29.05■■■□□ 2.24
ITM2C-206ENST00000457215 POLA1P09884 1462 aaPredicted RBP29.04■■■□□ 2.24
ITM2C-206ENST00000457215 TARBP1Q13395 1621 aaKnown RBP29.02■■■□□ 2.24
ITM2C-206ENST00000457215 RAD54L2Q9Y4B4 1467 aa28.95■■■□□ 2.22
ITM2C-206ENST00000457215 FGD5Q6ZNL6 1462 aa28.94■■■□□ 2.22
ITM2C-206ENST00000457215 SOGA1O94964 1423 aa28.89■■■□□ 2.22
ITM2C-206ENST00000457215 EIF4G3O43432 1585 aaKnown RBP28.88■■■□□ 2.21
ITM2C-206ENST00000457215 AQRO60306 1485 aaKnown RBP eCLIP28.86■■■□□ 2.211e-8■■■□□ 18.9
ITM2C-206ENST00000457215 TDRD9Q8NDG6 1382 aaKnown RBP28.78■■■□□ 2.2
ITM2C-206ENST00000457215 WRNQ14191 1432 aaPredicted RBP eCLIP28.76■■■□□ 2.19
ITM2C-206ENST00000457215 SYNJ1O43426 1573 aa28.75■■■□□ 2.19
ITM2C-206ENST00000457215 WDR97A6NE52 1622 aa28.72■■■□□ 2.19
ITM2C-206ENST00000457215 TOP2BQ02880 1626 aa28.72■■■□□ 2.19
ITM2C-206ENST00000457215 BIVM-ERCC5R4GMW8 1640 aa28.72■■■□□ 2.19
ITM2C-206ENST00000457215 OSCARQ8IYS5 282 aa28.7■■■□□ 2.18
ITM2C-206ENST00000457215 ABCA10Q8WWZ4 1543 aa28.65■■■□□ 2.18
ITM2C-206ENST00000457215 GRIN2BQ13224 1484 aa28.56■■■□□ 2.16
ITM2C-206ENST00000457215 SNAPC4Q5SXM2 1469 aa28.56■■■□□ 2.16
ITM2C-206ENST00000457215 CHD1O14646 1710 aa28.55■■■□□ 2.16
ITM2C-206ENST00000457215 ABCA5Q8WWZ7 1642 aa28.55■■■□□ 2.16
ITM2C-206ENST00000457215 GAPVD1Q14C86 1478 aa28.55■■■□□ 2.16
ITM2C-206ENST00000457215 PBRM1Q86U86 1689 aa28.49■■■□□ 2.15
ITM2C-206ENST00000457215 MAGI1Q96QZ7 1491 aaPredicted RBP28.48■■■□□ 2.15
ITM2C-206ENST00000457215 FBLN2P98095 1184 aa28.46■■■□□ 2.15
ITM2C-206ENST00000457215 SYNJ2O15056 1496 aa28.4■■■□□ 2.14
ITM2C-206ENST00000457215 CHMP7Q8WUX9 453 aaPredicted RBP28.36■■■□□ 2.13
ITM2C-206ENST00000457215 RIMBP3CA6NJZ7 1639 aa28.29■■■□□ 2.12
ITM2C-206ENST00000457215 RIMBP3BA6NNM3 1639 aa28.29■■■□□ 2.12
ITM2C-206ENST00000457215 RIMBP3Q9UFD9 1639 aa28.29■■■□□ 2.12
ITM2C-206ENST00000457215 ERICH3Q5RHP9 1530 aa28.28■■■□□ 2.12
ITM2C-206ENST00000457215 ADAMTS12P58397 1594 aa28.28■■■□□ 2.12
ITM2C-206ENST00000457215 CLASP1Q7Z460 1538 aa28.28■■■□□ 2.12
ITM2C-206ENST00000457215 ARHGEF11O15085 1522 aa28.27■■■□□ 2.12
ITM2C-206ENST00000457215 FHAD1B1AJZ9 1412 aa28.21■■■□□ 2.11
ITM2C-206ENST00000457215 GRIN2AQ12879 1464 aa28.21■■■□□ 2.11
ITM2C-206ENST00000457215 TRIM41Q8WV44 630 aa28.19■■■□□ 2.1
ITM2C-206ENST00000457215 IGF1RP08069 1367 aa28.13■■■□□ 2.09
ITM2C-206ENST00000457215 KIF27Q86VH2 1401 aa28.13■■■□□ 2.09
ITM2C-206ENST00000457215 NUP160Q12769 1436 aa28.12■■■□□ 2.09
ITM2C-206ENST00000457215 CEP170Q5SW79 1584 aa28.11■■■□□ 2.09
ITM2C-206ENST00000457215 ARAP1Q96P48 1450 aa28.06■■■□□ 2.08
ITM2C-206ENST00000457215 CYB5RLQ6IPT4 315 aa28■■■□□ 2.07
ITM2C-206ENST00000457215 RUSC2Q8N2Y8 1516 aa27.97■■■□□ 2.07
ITM2C-206ENST00000457215 CUL7Q14999 1698 aa27.97■■■□□ 2.07
ITM2C-206ENST00000457215 ERCC6L2Q5T890 1561 aa27.92■■■□□ 2.06
ITM2C-206ENST00000457215 SHROOM2Q13796 1616 aa27.92■■■□□ 2.06
ITM2C-206ENST00000457215 CARMIL1Q5VZK9 1371 aa27.91■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 130.1 ms