RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 TMEM131LA2VDJ0 1609 aa34.44■■■■□ 3.1
CBX3-204ENST00000456948 RIMS2Q9UQ26 1411 aa34.41■■■■□ 3.1
CBX3-204ENST00000456948 MPHOSPH9Q99550 1183 aa34.38■■■■□ 3.09
CBX3-204ENST00000456948 MYO5BQ9ULV0 1848 aa34.37■■■■□ 3.09
CBX3-204ENST00000456948 ZNF326Q5BKZ1 582 aaKnown RBP34.37■■■■□ 3.09
CBX3-204ENST00000456948 TRPM2O94759 1503 aa34.35■■■■□ 3.09
CBX3-204ENST00000456948 ZFYVE9O95405 1425 aa34.35■■■■□ 3.09
CBX3-204ENST00000456948 PLEKHG1Q9ULL1 1385 aa34.33■■■■□ 3.09
CBX3-204ENST00000456948 SLC26A8Q96RN1 970 aa34.31■■■■□ 3.08
CBX3-204ENST00000456948 RAB3GAP2Q9H2M9 1393 aa34.31■■■■□ 3.08
CBX3-204ENST00000456948 SCAF1Q9H7N4 1312 aaKnown RBP34.3■■■■□ 3.08
CBX3-204ENST00000456948 STRCP1A6NGW2 1772 aa34.29■■■■□ 3.08
CBX3-204ENST00000456948 TOM1O60784 492 aa34.27■■■■□ 3.08
CBX3-204ENST00000456948 HRCP23327 699 aa34.27■■■■□ 3.08
CBX3-204ENST00000456948 KIF1BO60333 1816 aa34.26■■■■□ 3.08
CBX3-204ENST00000456948 PIP4K2BP78356 416 aa34.26■■■■□ 3.08
CBX3-204ENST00000456948 NUTM2DQ5VT03 806 aaPredicted RBP34.26■■■■□ 3.08
CBX3-204ENST00000456948 CLTCL1P53675 1640 aa34.25■■■■□ 3.07
CBX3-204ENST00000456948 KCNA6P17658 529 aa34.24■■■■□ 3.07
CBX3-204ENST00000456948 FOXD1Q16676 465 aa34.24■■■■□ 3.07
CBX3-204ENST00000456948 SENP3Q9H4L4 574 aaPredicted RBP34.24■■■■□ 3.07
CBX3-204ENST00000456948 TBX22Q9Y458 520 aa34.23■■■■□ 3.07
CBX3-204ENST00000456948 LRRC7Q96NW7 1537 aa34.21■■■■□ 3.07
CBX3-204ENST00000456948 CCDC144AA2RUR9 1427 aa34.21■■■■□ 3.07
CBX3-204ENST00000456948 RPGRIP1LQ68CZ1 1315 aa34.18■■■■□ 3.06
CBX3-204ENST00000456948 VGFO15240 615 aaPredicted RBP34.16■■■■□ 3.06
CBX3-204ENST00000456948 PROSER2Q86WR7 435 aaPredicted RBP34.13■■■■□ 3.05
CBX3-204ENST00000456948 DIP2AQ14689 1571 aa34.11■■■■□ 3.05
CBX3-204ENST00000456948 PIK3R4Q99570 1358 aa34.11■■■■□ 3.05
CBX3-204ENST00000456948 ADAMTS13Q76LX8 1427 aa34.07■■■■□ 3.04
CBX3-204ENST00000456948 DISP3Q9P2K9 1392 aa34.07■■■■□ 3.04
CBX3-204ENST00000456948 NKTRP30414 1462 aaKnown RBP34.06■■■■□ 3.04
CBX3-204ENST00000456948 NEXMIFQ5QGS0 1516 aa34.05■■■■□ 3.04
CBX3-204ENST00000456948 HSPA1LP34931 641 aa34.05■■■■□ 3.04
CBX3-204ENST00000456948 RGL3Q3MIN7 710 aa34.04■■■■□ 3.04
CBX3-204ENST00000456948 TMEM94Q12767 1356 aa34.02■■■■□ 3.04
CBX3-204ENST00000456948 ALKQ9UM73 1620 aa34.02■■■■□ 3.04
CBX3-204ENST00000456948 CHD2O14647 1828 aaKnown RBP34.02■■■■□ 3.04
CBX3-204ENST00000456948 XIRP1Q702N8 1843 aaKnown RBP34.02■■■■□ 3.04
CBX3-204ENST00000456948 NWD1Q149M9 1564 aa34.02■■■■□ 3.04
CBX3-204ENST00000456948 SETBP1Q9Y6X0 1596 aa34.02■■■■□ 3.04
CBX3-204ENST00000456948 RBM33Q96EV2 1170 aaKnown RBP34■■■■□ 3.03
CBX3-204ENST00000456948 AMOTL2Q9Y2J4 779 aa33.98■■■■□ 3.03
CBX3-204ENST00000456948 ANKRD30BQ9BXX2 1392 aa33.97■■■■□ 3.03
CBX3-204ENST00000456948 C14orf37Q86TY3 774 aa33.95■■■■□ 3.03
CBX3-204ENST00000456948 SPATA31E1Q6ZUB1 1445 aa33.95■■■■□ 3.02
CBX3-204ENST00000456948 MSH6P52701 1360 aa33.93■■■■□ 3.02
CBX3-204ENST00000456948 NCOA3Q9Y6Q9 1424 aa33.92■■■■□ 3.02
CBX3-204ENST00000456948 PPLO60437 1756 aa33.91■■■■□ 3.02
CBX3-204ENST00000456948 NRXN3Q9Y4C0 1643 aa33.9■■■■□ 3.02
CBX3-204ENST00000456948 METP08581 1390 aa33.86■■■■□ 3.01
CBX3-204ENST00000456948 TRIM26Q12899 539 aaPredicted RBP33.83■■■■□ 3.01
CBX3-204ENST00000456948 PTPRUQ92729 1446 aa33.83■■■■□ 3.01
CBX3-204ENST00000456948 C19orf44Q9H6X5 657 aa33.83■■■■□ 3.01
CBX3-204ENST00000456948 ADGRF5Q8IZF2 1346 aa33.81■■■■□ 3
CBX3-204ENST00000456948 ATF3P18847 181 aa33.8■■■■□ 3
CBX3-204ENST00000456948 CADPS2Q86UW7 1296 aa33.78■■■■□ 3
CBX3-204ENST00000456948 STAC3Q96MF2 364 aa33.78■■■■□ 3
CBX3-204ENST00000456948 ILDR2Q71H61 639 aa33.77■■■■□ 3
CBX3-204ENST00000456948 SLAIN2Q9P270 581 aa33.75■■■□□ 2.99
CBX3-204ENST00000456948 XRN1Q8IZH2 1706 aaKnown RBP33.75■■■□□ 2.99
CBX3-204ENST00000456948 IFT172Q9UG01 1749 aa33.75■■■□□ 2.99
CBX3-204ENST00000456948 FAM135BQ49AJ0 1406 aa33.73■■■□□ 2.99
CBX3-204ENST00000456948 PIK3C2GO75747 1445 aa33.7■■■□□ 2.98
CBX3-204ENST00000456948 MYOM2P54296 1465 aa33.69■■■□□ 2.98
CBX3-204ENST00000456948 MED1Q15648 1581 aaPredicted RBP33.68■■■□□ 2.98
CBX3-204ENST00000456948 DCAF11Q8TEB1 546 aa33.68■■■□□ 2.98
CBX3-204ENST00000456948 ROBO1Q9Y6N7 1651 aa33.68■■■□□ 2.98
CBX3-204ENST00000456948 SETD1AO15047 1707 aaKnown RBP33.67■■■□□ 2.98
CBX3-204ENST00000456948 PTCH1Q13635 1447 aa33.66■■■□□ 2.98
CBX3-204ENST00000456948 C14orf93Q9H972 538 aaKnown RBP33.66■■■□□ 2.98
CBX3-204ENST00000456948 KDM2AQ9Y2K7 1162 aa33.65■■■□□ 2.98
CBX3-204ENST00000456948 DCCP43146 1447 aa33.64■■■□□ 2.98
CBX3-204ENST00000456948 SIPA1L2Q9P2F8 1722 aaPredicted RBP33.63■■■□□ 2.97
CBX3-204ENST00000456948 STK26Q9P289 416 aa33.62■■■□□ 2.97
CBX3-204ENST00000456948 PRAG1Q86YV5 1406 aa33.62■■■□□ 2.97
CBX3-204ENST00000456948 NRXN1Q9ULB1 1477 aa33.61■■■□□ 2.97
CBX3-204ENST00000456948 TMEM132EQ6IEE7 984 aa33.6■■■□□ 2.97
CBX3-204ENST00000456948 ADGRL3Q9HAR2 1447 aa33.6■■■□□ 2.97
CBX3-204ENST00000456948 LRPPRCP42704 1394 aaKnown RBP33.6■■■□□ 2.97
CBX3-204ENST00000456948 DHX57Q6P158 1386 aaKnown RBP33.6■■■□□ 2.97
CBX3-204ENST00000456948 ROBO2Q9HCK4 1378 aa33.6■■■□□ 2.97
CBX3-204ENST00000456948 PHF23Q9BUL5 403 aaPredicted RBP33.59■■■□□ 2.97
CBX3-204ENST00000456948 CFAP70Q5T0N1 1121 aa33.58■■■□□ 2.97
CBX3-204ENST00000456948 ABCC11Q96J66 1382 aa33.58■■■□□ 2.97
CBX3-204ENST00000456948 LAMC1P11047 1609 aa33.57■■■□□ 2.97
CBX3-204ENST00000456948 YTHDC2Q9H6S0 1430 aaKnown RBP33.53■■■□□ 2.96
CBX3-204ENST00000456948 SIRT1Q96EB6 747 aa33.53■■■□□ 2.96
CBX3-204ENST00000456948 TECPR2O15040 1411 aa33.52■■■□□ 2.96
CBX3-204ENST00000456948 PHLPP1O60346 1717 aa33.5■■■□□ 2.95
CBX3-204ENST00000456948 SOCS7O14512 581 aa33.47■■■□□ 2.95
CBX3-204ENST00000456948 WAPLQ7Z5K2 1190 aa33.46■■■□□ 2.95
CBX3-204ENST00000456948 NALCNQ8IZF0 1738 aa33.45■■■□□ 2.95
CBX3-204ENST00000456948 BRINP3Q76B58 766 aa33.44■■■□□ 2.94
CBX3-204ENST00000456948 KNDC1Q76NI1 1749 aa33.44■■■□□ 2.94
CBX3-204ENST00000456948 MST1RQ04912 1400 aa33.44■■■□□ 2.94
CBX3-204ENST00000456948 ASXL1Q8IXJ9 1541 aa33.43■■■□□ 2.94
CBX3-204ENST00000456948 NEUROD1Q13562 356 aa33.42■■■□□ 2.94
CBX3-204ENST00000456948 POGKQ9P215 609 aa33.42■■■□□ 2.94
CBX3-204ENST00000456948 SIN3AQ96ST3 1273 aa33.39■■■□□ 2.94
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms