RNA–Protein interactions for RNA: ENST00000456433.5

PMPCB-206, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 5

Gene PMPCB, Length 904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-206ENST00000456433 NEXMIFQ5QGS0 1516 aa25■■□□□ 1.59
PMPCB-206ENST00000456433 NCKAP5LQ9HCH0 1330 aa24.99■■□□□ 1.59
PMPCB-206ENST00000456433 DMRT2Q9Y5R5 561 aa24.99■■□□□ 1.59
PMPCB-206ENST00000456433 RPGRIP1LQ68CZ1 1315 aa24.98■■□□□ 1.59
PMPCB-206ENST00000456433 HDGFP51858 240 aaKnown RBP24.98■■□□□ 1.59
PMPCB-206ENST00000456433 TXNDC2Q86VQ3 553 aa24.98■■□□□ 1.59
PMPCB-206ENST00000456433 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.98■■□□□ 1.59
PMPCB-206ENST00000456433 IQGAP1P46940 1657 aa24.97■■□□□ 1.59
PMPCB-206ENST00000456433 NPHP4O75161 1426 aaPredicted RBP24.96■■□□□ 1.59
PMPCB-206ENST00000456433 PPLO60437 1756 aa24.96■■□□□ 1.59
PMPCB-206ENST00000456433 IFT172Q9UG01 1749 aa24.95■■□□□ 1.59
PMPCB-206ENST00000456433 ZNF326Q5BKZ1 582 aaKnown RBP24.95■■□□□ 1.58
PMPCB-206ENST00000456433 PLEKHG1Q9ULL1 1385 aa24.93■■□□□ 1.58
PMPCB-206ENST00000456433 CLSPNQ9HAW4 1339 aa24.88■■□□□ 1.57
PMPCB-206ENST00000456433 PPP1R15AO75807 674 aaPredicted RBP24.88■■□□□ 1.57
PMPCB-206ENST00000456433 SETBP1Q9Y6X0 1596 aa24.88■■□□□ 1.57
PMPCB-206ENST00000456433 RGL3Q3MIN7 710 aa24.87■■□□□ 1.57
PMPCB-206ENST00000456433 MYOM2P54296 1465 aa24.86■■□□□ 1.57
PMPCB-206ENST00000456433 VGFO15240 615 aaPredicted RBP24.86■■□□□ 1.57
PMPCB-206ENST00000456433 DIP2AQ14689 1571 aa24.85■■□□□ 1.57
PMPCB-206ENST00000456433 NRXN3Q9Y4C0 1643 aa24.85■■□□□ 1.57
PMPCB-206ENST00000456433 NUTM2DQ5VT03 806 aaPredicted RBP24.84■■□□□ 1.57
PMPCB-206ENST00000456433 STAC3Q96MF2 364 aa24.83■■□□□ 1.57
PMPCB-206ENST00000456433 SIN3AQ96ST3 1273 aa24.83■■□□□ 1.57
PMPCB-206ENST00000456433 ADAMTS13Q76LX8 1427 aa24.83■■□□□ 1.57
PMPCB-206ENST00000456433 NRXN1Q9ULB1 1477 aa24.83■■□□□ 1.56
PMPCB-206ENST00000456433 PIK3C2GO75747 1445 aa24.78■■□□□ 1.56
PMPCB-206ENST00000456433 TBX22Q9Y458 520 aa24.78■■□□□ 1.56
PMPCB-206ENST00000456433 ADGRF5Q8IZF2 1346 aa24.78■■□□□ 1.56
PMPCB-206ENST00000456433 SETD1AO15047 1707 aaKnown RBP24.77■■□□□ 1.56
PMPCB-206ENST00000456433 PIK3R4Q99570 1358 aa24.75■■□□□ 1.55
PMPCB-206ENST00000456433 NEUROD1Q13562 356 aa24.74■■□□□ 1.55
PMPCB-206ENST00000456433 DCAF11Q8TEB1 546 aa24.74■■□□□ 1.55
PMPCB-206ENST00000456433 BCANQ96GW7 911 aa24.74■■□□□ 1.55
PMPCB-206ENST00000456433 SLC26A8Q96RN1 970 aa24.74■■□□□ 1.55
PMPCB-206ENST00000456433 ALKQ9UM73 1620 aa24.74■■□□□ 1.55
PMPCB-206ENST00000456433 LAMC1P11047 1609 aa24.72■■□□□ 1.55
PMPCB-206ENST00000456433 LTBP4Q8N2S1 1624 aa24.72■■□□□ 1.55
PMPCB-206ENST00000456433 NWD1Q149M9 1564 aa24.72■■□□□ 1.55
PMPCB-206ENST00000456433 CCER1Q8TC90 406 aaPredicted RBP24.72■■□□□ 1.55
PMPCB-206ENST00000456433 CHD2O14647 1828 aaKnown RBP24.72■■□□□ 1.55
PMPCB-206ENST00000456433 L3MBTL2Q969R5 705 aa24.71■■□□□ 1.55
PMPCB-206ENST00000456433 ZNF335Q9H4Z2 1342 aaPredicted RBP24.7■■□□□ 1.54
PMPCB-206ENST00000456433 STRCP1A6NGW2 1772 aa24.7■■□□□ 1.54
PMPCB-206ENST00000456433 CPS1P31327 1500 aa24.68■■□□□ 1.54
PMPCB-206ENST00000456433 TONSLQ96HA7 1378 aa24.67■■□□□ 1.54
PMPCB-206ENST00000456433 KCNA6P17658 529 aa24.66■■□□□ 1.54
PMPCB-206ENST00000456433 SENP3Q9H4L4 574 aaPredicted RBP24.66■■□□□ 1.54
PMPCB-206ENST00000456433 C14orf93Q9H972 538 aaKnown RBP24.66■■□□□ 1.54
PMPCB-206ENST00000456433 KDM2AQ9Y2K7 1162 aa24.66■■□□□ 1.54
PMPCB-206ENST00000456433 PRAG1Q86YV5 1406 aa24.66■■□□□ 1.54
PMPCB-206ENST00000456433 METP08581 1390 aa24.66■■□□□ 1.54
PMPCB-206ENST00000456433 NKTRP30414 1462 aaKnown RBP24.65■■□□□ 1.54
PMPCB-206ENST00000456433 XRN1Q8IZH2 1706 aaKnown RBP24.65■■□□□ 1.54
PMPCB-206ENST00000456433 KIAA1210Q9ULL0 1709 aa24.65■■□□□ 1.54
PMPCB-206ENST00000456433 TIMELESSQ9UNS1 1208 aa24.64■■□□□ 1.54
PMPCB-206ENST00000456433 ASXL1Q8IXJ9 1541 aa24.64■■□□□ 1.53
PMPCB-206ENST00000456433 PTPRUQ92729 1446 aa24.63■■□□□ 1.53
PMPCB-206ENST00000456433 ADGRB1O14514 1584 aa24.59■■□□□ 1.53
PMPCB-206ENST00000456433 CFAP70Q5T0N1 1121 aa24.59■■□□□ 1.53
PMPCB-206ENST00000456433 ILDR1Q86SU0 546 aaPredicted RBP24.58■■□□□ 1.53
PMPCB-206ENST00000456433 IQSEC2Q5JU85 1478 aa24.58■■□□□ 1.52
PMPCB-206ENST00000456433 LRRC7Q96NW7 1537 aa24.57■■□□□ 1.52
PMPCB-206ENST00000456433 AMOTL2Q9Y2J4 779 aa24.57■■□□□ 1.52
PMPCB-206ENST00000456433 KNDC1Q76NI1 1749 aa24.57■■□□□ 1.52
PMPCB-206ENST00000456433 TECPR2O15040 1411 aa24.56■■□□□ 1.52
PMPCB-206ENST00000456433 PTCH1Q13635 1447 aa24.56■■□□□ 1.52
PMPCB-206ENST00000456433 LRPPRCP42704 1394 aaKnown RBP24.55■■□□□ 1.52
PMPCB-206ENST00000456433 TRPM1Q7Z4N2 1603 aa24.55■■□□□ 1.52
PMPCB-206ENST00000456433 YTHDC2Q9H6S0 1430 aaKnown RBP24.54■■□□□ 1.52
PMPCB-206ENST00000456433 ABCC11Q96J66 1382 aa24.54■■□□□ 1.52
PMPCB-206ENST00000456433 XIRP1Q702N8 1843 aaKnown RBP24.53■■□□□ 1.52
PMPCB-206ENST00000456433 NCOA3Q9Y6Q9 1424 aa24.52■■□□□ 1.52
PMPCB-206ENST00000456433 TMEM132EQ6IEE7 984 aa24.51■■□□□ 1.51
PMPCB-206ENST00000456433 CERKQ8TCT0 537 aa24.51■■□□□ 1.51
PMPCB-206ENST00000456433 DLC1Q96QB1 1528 aa24.5■■□□□ 1.51
PMPCB-206ENST00000456433 NBPF8Q3BBV2 869 aa24.49■■□□□ 1.51
PMPCB-206ENST00000456433 TMEM94Q12767 1356 aa24.49■■□□□ 1.51
PMPCB-206ENST00000456433 PROSER2Q86WR7 435 aaPredicted RBP24.48■■□□□ 1.51
PMPCB-206ENST00000456433 RALGAPBQ86X10 1494 aa24.47■■□□□ 1.51
PMPCB-206ENST00000456433 ROBO2Q9HCK4 1378 aa24.47■■□□□ 1.51
PMPCB-206ENST00000456433 SIRT1Q96EB6 747 aa24.47■■□□□ 1.51
PMPCB-206ENST00000456433 FAM135BQ49AJ0 1406 aa24.46■■□□□ 1.51
PMPCB-206ENST00000456433 GPRASP1Q5JY77 1395 aa24.46■■□□□ 1.51
PMPCB-206ENST00000456433 NBPF1Q3BBV0 1214 aa24.44■■□□□ 1.5
PMPCB-206ENST00000456433 STK26Q9P289 416 aa24.42■■□□□ 1.5
PMPCB-206ENST00000456433 ROCK2O75116 1388 aaKnown RBP24.42■■□□□ 1.5
PMPCB-206ENST00000456433 ARHGEF28Q8N1W1 1705 aaKnown RBP24.41■■□□□ 1.5
PMPCB-206ENST00000456433 FBXO41Q8TF61 875 aa24.41■■□□□ 1.5
PMPCB-206ENST00000456433 ADGRL3Q9HAR2 1447 aa24.4■■□□□ 1.5
PMPCB-206ENST00000456433 NALCNQ8IZF0 1738 aa24.38■■□□□ 1.49
PMPCB-206ENST00000456433 DCCP43146 1447 aa24.38■■□□□ 1.49
PMPCB-206ENST00000456433 MSH6P52701 1360 aa24.37■■□□□ 1.49
PMPCB-206ENST00000456433 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.36■■□□□ 1.49
PMPCB-206ENST00000456433 RBM33Q96EV2 1170 aaKnown RBP24.36■■□□□ 1.49
PMPCB-206ENST00000456433 TRAK1Q9UPV9 953 aa24.36■■□□□ 1.49
PMPCB-206ENST00000456433 PLEKHH1Q9ULM0 1364 aa24.35■■□□□ 1.49
PMPCB-206ENST00000456433 C19orf44Q9H6X5 657 aa24.35■■□□□ 1.49
PMPCB-206ENST00000456433 WAPLQ7Z5K2 1190 aa24.34■■□□□ 1.49
PMPCB-206ENST00000456433 PRAM1Q96QH2 718 aa24.33■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms