RNA–Protein interactions for RNA: ENST00000456013.5

PTPN6-204, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 1 (best) BASIC

Gene PTPN6, Length 2,389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-204ENST00000456013 PLEKHH1Q9ULM0 1364 aa23.27■■□□□ 1.32
PTPN6-204ENST00000456013 WDR43Q15061 677 aaKnown RBP eCLIP23.27■■□□□ 1.32
PTPN6-204ENST00000456013 TRAPPC8Q9Y2L5 1435 aa23.26■■□□□ 1.31
PTPN6-204ENST00000456013 MYOM1P52179 1685 aa23.26■■□□□ 1.31
PTPN6-204ENST00000456013 ASXL1Q8IXJ9 1541 aa23.26■■□□□ 1.31
PTPN6-204ENST00000456013 ZNF521Q96K83 1311 aa23.26■■□□□ 1.31
PTPN6-204ENST00000456013 DUSP27Q5VZP5 1158 aa23.26■■□□□ 1.31
PTPN6-204ENST00000456013 PIK3C2GO75747 1445 aa23.25■■□□□ 1.31
PTPN6-204ENST00000456013 PTPRTO14522 1441 aa23.24■■□□□ 1.31
PTPN6-204ENST00000456013 KDM2BQ8NHM5 1336 aa23.24■■□□□ 1.31
PTPN6-204ENST00000456013 C20orf194Q5TEA3 1177 aa23.24■■□□□ 1.31
PTPN6-204ENST00000456013 CLTCL1P53675 1640 aa23.24■■□□□ 1.31
PTPN6-204ENST00000456013 DEPDC5O75140 1603 aa23.23■■□□□ 1.31
PTPN6-204ENST00000456013 RTEL1-TNFRSF6BF6WH68 1400 aa23.23■■□□□ 1.31
PTPN6-204ENST00000456013 KIAA1210Q9ULL0 1709 aa23.23■■□□□ 1.31
PTPN6-204ENST00000456013 NPC1L1Q9UHC9 1359 aa23.23■■□□□ 1.31
PTPN6-204ENST00000456013 GOLGA2Q08379 1002 aa23.21■■□□□ 1.31
PTPN6-204ENST00000456013 TET3O43151 1660 aa23.21■■□□□ 1.31
PTPN6-204ENST00000456013 USP35Q9P2H5 1018 aa23.2■■□□□ 1.3
PTPN6-204ENST00000456013 ZFYVE16Q7Z3T8 1539 aa23.2■■□□□ 1.3
PTPN6-204ENST00000456013 KDM5AP29375 1690 aaKnown RBP23.19■■□□□ 1.3
PTPN6-204ENST00000456013 UHRF1BP1LA0JNW5 1464 aa23.19■■□□□ 1.3
PTPN6-204ENST00000456013 CENPQQ7L2Z9 268 aaPredicted RBP23.19■■□□□ 1.3
PTPN6-204ENST00000456013 DDRGK1Q96HY6 314 aa23.19■■□□□ 1.3
PTPN6-204ENST00000456013 SKAP1Q86WV1 359 aa23.18■■□□□ 1.3
PTPN6-204ENST00000456013 SPAG9O60271 1321 aaKnown RBP23.18■■□□□ 1.3
PTPN6-204ENST00000456013 ARAP3Q8WWN8 1544 aa23.18■■□□□ 1.3
PTPN6-204ENST00000456013 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.18■■□□□ 1.3
PTPN6-204ENST00000456013 EIF3AQ14152 1382 aaKnown RBP23.17■■□□□ 1.3
PTPN6-204ENST00000456013 NEURL4Q96JN8 1562 aa23.17■■□□□ 1.3
PTPN6-204ENST00000456013 PPM1GO15355 546 aaPredicted RBP23.16■■□□□ 1.3
PTPN6-204ENST00000456013 SLFN5Q08AF3 891 aa23.16■■□□□ 1.3
PTPN6-204ENST00000456013 LAS1LQ9Y4W2 734 aaKnown RBP23.15■■□□□ 1.3
PTPN6-204ENST00000456013 TRMT2AQ8IZ69 625 aaKnown RBP23.14■■□□□ 1.3
PTPN6-204ENST00000456013 VWDEQ8N2E2 1590 aa23.14■■□□□ 1.29
PTPN6-204ENST00000456013 NEFMP07197 916 aa23.13■■□□□ 1.29
PTPN6-204ENST00000456013 AFAP1Q8N556 730 aa23.1■■□□□ 1.29
PTPN6-204ENST00000456013 SLC24A1O60721 1099 aa23.09■■□□□ 1.29
PTPN6-204ENST00000456013 MAP3K4Q9Y6R4 1608 aa23.09■■□□□ 1.29
PTPN6-204ENST00000456013 KANK1Q14678 1352 aa23.09■■□□□ 1.29
PTPN6-204ENST00000456013 INO80Q9ULG1 1556 aaPredicted RBP23.09■■□□□ 1.29
PTPN6-204ENST00000456013 NKTRP30414 1462 aaKnown RBP23.08■■□□□ 1.29
PTPN6-204ENST00000456013 MYOM2P54296 1465 aa23.07■■□□□ 1.28
PTPN6-204ENST00000456013 FAM161AQ3B820 660 aa23.07■■□□□ 1.28
PTPN6-204ENST00000456013 ERVK-7P63135 1459 aa23.07■■□□□ 1.28
PTPN6-204ENST00000456013 ABCA6Q8N139 1617 aa23.07■■□□□ 1.28
PTPN6-204ENST00000456013 ATP7AQ04656 1500 aa23.07■■□□□ 1.28
PTPN6-204ENST00000456013 CCDC146Q8IYE0 955 aa23.06■■□□□ 1.28
PTPN6-204ENST00000456013 KIF1BO60333 1816 aa23.05■■□□□ 1.28
PTPN6-204ENST00000456013 IFT172Q9UG01 1749 aa23.05■■□□□ 1.28
PTPN6-204ENST00000456013 APAF1O14727 1248 aa23.04■■□□□ 1.28
PTPN6-204ENST00000456013 C8orf34Q49A92 452 aa23.04■■□□□ 1.28
PTPN6-204ENST00000456013 NGEFQ8N5V2 710 aa23.04■■□□□ 1.28
PTPN6-204ENST00000456013 SPINK5Q9NQ38 1064 aaPredicted RBP23.03■■□□□ 1.28
PTPN6-204ENST00000456013 ABCA9Q8IUA7 1624 aa23.03■■□□□ 1.28
PTPN6-204ENST00000456013 E9PSI1 815 aa23.03■■□□□ 1.28
PTPN6-204ENST00000456013 MYO3AQ8NEV4 1616 aa23.02■■□□□ 1.28
PTPN6-204ENST00000456013 MROH1Q8NDA8 1641 aa23.01■■□□□ 1.27
PTPN6-204ENST00000456013 CFAP70Q5T0N1 1121 aa23■■□□□ 1.27
PTPN6-204ENST00000456013 CARD14Q9BXL6 1004 aa22.98■■□□□ 1.27
PTPN6-204ENST00000456013 VIRMAQ69YN4 1812 aaKnown RBP22.98■■□□□ 1.27
PTPN6-204ENST00000456013 KIF3BO15066 747 aa22.98■■□□□ 1.27
PTPN6-204ENST00000456013 UGGT1Q9NYU2 1555 aa22.98■■□□□ 1.27
PTPN6-204ENST00000456013 FANCAO15360 1455 aa22.97■■□□□ 1.27
PTPN6-204ENST00000456013 SBNO2Q9Y2G9 1366 aa22.97■■□□□ 1.27
PTPN6-204ENST00000456013 ADGRF5Q8IZF2 1346 aa22.97■■□□□ 1.27
PTPN6-204ENST00000456013 BCAR3O75815 825 aa22.97■■□□□ 1.27
PTPN6-204ENST00000456013 MROH2AA6NES4 1674 aa22.96■■□□□ 1.27
PTPN6-204ENST00000456013 POLR3AO14802 1390 aaPredicted RBP22.96■■□□□ 1.27
PTPN6-204ENST00000456013 NRXN1Q9ULB1 1477 aa22.96■■□□□ 1.27
PTPN6-204ENST00000456013 EFCAB6Q5THR3 1501 aa22.95■■□□□ 1.27
PTPN6-204ENST00000456013 DAXXQ9UER7 740 aaPredicted RBP22.95■■□□□ 1.26
PTPN6-204ENST00000456013 NINLQ9Y2I6 1382 aa22.94■■□□□ 1.26
PTPN6-204ENST00000456013 RGS3P49796 1198 aa22.93■■□□□ 1.26
PTPN6-204ENST00000456013 PDE3AQ14432 1141 aa22.93■■□□□ 1.26
PTPN6-204ENST00000456013 NFKBIBQ15653 356 aa22.92■■□□□ 1.26
PTPN6-204ENST00000456013 DMRT2Q9Y5R5 561 aa22.92■■□□□ 1.26
PTPN6-204ENST00000456013 SETBP1Q9Y6X0 1596 aa22.92■■□□□ 1.26
PTPN6-204ENST00000456013 SLC4A3P48751 1232 aa22.92■■□□□ 1.26
PTPN6-204ENST00000456013 SHPRHQ149N8 1683 aa22.92■■□□□ 1.26
PTPN6-204ENST00000456013 CGNL1Q0VF96 1302 aa22.92■■□□□ 1.26
PTPN6-204ENST00000456013 ADGRL1O94910 1474 aa22.91■■□□□ 1.26
PTPN6-204ENST00000456013 PPRC1Q5VV67 1664 aaKnown RBP22.9■■□□□ 1.26
PTPN6-204ENST00000456013 ZC3H13Q5T200 1668 aaKnown RBP22.89■■□□□ 1.25
PTPN6-204ENST00000456013 WWC1Q8IX03 1113 aa22.89■■□□□ 1.25
PTPN6-204ENST00000456013 LMTK2Q8IWU2 1503 aa22.88■■□□□ 1.25
PTPN6-204ENST00000456013 CENPJQ9HC77 1338 aaPredicted RBP22.88■■□□□ 1.25
PTPN6-204ENST00000456013 IGHDP01880 384 aa22.87■■□□□ 1.25
PTPN6-204ENST00000456013 ADGRB3O60242 1522 aa22.86■■□□□ 1.25
PTPN6-204ENST00000456013 KIDINS220Q9ULH0 1771 aa22.86■■□□□ 1.25
PTPN6-204ENST00000456013 GSE1Q14687 1217 aa22.85■■□□□ 1.25
PTPN6-204ENST00000456013 QRICH2Q9H0J4 1663 aa22.84■■□□□ 1.25
PTPN6-204ENST00000456013 CLUAP1Q96AJ1 413 aa22.84■■□□□ 1.25
PTPN6-204ENST00000456013 NSD3Q9BZ95 1437 aa22.84■■□□□ 1.25
PTPN6-204ENST00000456013 PPLO60437 1756 aa22.84■■□□□ 1.25
PTPN6-204ENST00000456013 NOS1P29475 1434 aa22.84■■□□□ 1.25
PTPN6-204ENST00000456013 IL27Q8NEV9 243 aa22.83■■□□□ 1.25
PTPN6-204ENST00000456013 USP32Q8NFA0 1604 aa22.83■■□□□ 1.25
PTPN6-204ENST00000456013 MAPK8IP3Q9UPT6 1336 aa22.82■■□□□ 1.24
PTPN6-204ENST00000456013 IQSEC2Q5JU85 1478 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms