RNA–Protein interactions for RNA: ENST00000455814.2

LYRM4-202, Transcript of LYR motif containing 4, humanhuman

TSL 3

Gene LYRM4, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM4-202ENST00000455814 PLEKHG1Q9ULL1 1385 aa13.05□□□□□ -0.32
LYRM4-202ENST00000455814 RIMS2Q9UQ26 1411 aa13.05□□□□□ -0.32
LYRM4-202ENST00000455814 SLC4A1APQ9BWU0 796 aaKnown RBP13.04□□□□□ -0.32
LYRM4-202ENST00000455814 GCC2Q8IWJ2 1684 aa13.03□□□□□ -0.32
LYRM4-202ENST00000455814 LRRC7Q96NW7 1537 aa13.03□□□□□ -0.32
LYRM4-202ENST00000455814 SYNMO15061 1565 aa13.03□□□□□ -0.32
LYRM4-202ENST00000455814 IQGAP3Q86VI3 1631 aa13.02□□□□□ -0.32
LYRM4-202ENST00000455814 C14orf37Q86TY3 774 aa13.02□□□□□ -0.33
LYRM4-202ENST00000455814 NAIPQ13075 1403 aa13.02□□□□□ -0.33
LYRM4-202ENST00000455814 PIK3R4Q99570 1358 aa13.01□□□□□ -0.33
LYRM4-202ENST00000455814 HFM1A2PYH4 1435 aa13.01□□□□□ -0.33
LYRM4-202ENST00000455814 VGFO15240 615 aaPredicted RBP13□□□□□ -0.33
LYRM4-202ENST00000455814 HSPA1LP34931 641 aa13□□□□□ -0.33
LYRM4-202ENST00000455814 MSH6P52701 1360 aa12.99□□□□□ -0.33
LYRM4-202ENST00000455814 TMEM94Q12767 1356 aa12.99□□□□□ -0.33
LYRM4-202ENST00000455814 ZFYVE9O95405 1425 aa12.98□□□□□ -0.33
LYRM4-202ENST00000455814 RPGRIP1LQ68CZ1 1315 aa12.98□□□□□ -0.33
LYRM4-202ENST00000455814 NUTM2DQ5VT03 806 aaPredicted RBP12.98□□□□□ -0.33
LYRM4-202ENST00000455814 NCOA3Q9Y6Q9 1424 aa12.97□□□□□ -0.33
LYRM4-202ENST00000455814 NKTRP30414 1462 aaKnown RBP12.97□□□□□ -0.33
LYRM4-202ENST00000455814 E9PCH4 1651 aa12.96□□□□□ -0.33
LYRM4-202ENST00000455814 ATF3P18847 181 aa12.96□□□□□ -0.33
LYRM4-202ENST00000455814 CADPS2Q86UW7 1296 aa12.96□□□□□ -0.33
LYRM4-202ENST00000455814 SENP3Q9H4L4 574 aaPredicted RBP12.96□□□□□ -0.33
LYRM4-202ENST00000455814 TMEM131LA2VDJ0 1609 aa12.95□□□□□ -0.34
LYRM4-202ENST00000455814 PHF23Q9BUL5 403 aaPredicted RBP12.95□□□□□ -0.34
LYRM4-202ENST00000455814 C19orf44Q9H6X5 657 aa12.95□□□□□ -0.34
LYRM4-202ENST00000455814 AMOTL2Q9Y2J4 779 aa12.95□□□□□ -0.34
LYRM4-202ENST00000455814 MPHOSPH9Q99550 1183 aa12.94□□□□□ -0.34
LYRM4-202ENST00000455814 SLAIN2Q9P270 581 aa12.94□□□□□ -0.34
LYRM4-202ENST00000455814 FAM135BQ49AJ0 1406 aa12.94□□□□□ -0.34
LYRM4-202ENST00000455814 DIP2AQ14689 1571 aa12.91□□□□□ -0.34
LYRM4-202ENST00000455814 RBM33Q96EV2 1170 aaKnown RBP12.9□□□□□ -0.34
LYRM4-202ENST00000455814 CCDC144AA2RUR9 1427 aa12.89□□□□□ -0.35
LYRM4-202ENST00000455814 ADAMTS13Q76LX8 1427 aa12.89□□□□□ -0.35
LYRM4-202ENST00000455814 SETD5Q9C0A6 1442 aa12.89□□□□□ -0.35
LYRM4-202ENST00000455814 TRPM2O94759 1503 aa12.89□□□□□ -0.35
LYRM4-202ENST00000455814 SPHKAPQ2M3C7 1700 aa12.88□□□□□ -0.35
LYRM4-202ENST00000455814 STRCP1A6NGW2 1772 aa12.87□□□□□ -0.35
LYRM4-202ENST00000455814 NWD1Q149M9 1564 aa12.87□□□□□ -0.35
LYRM4-202ENST00000455814 HRCP23327 699 aa12.87□□□□□ -0.35
LYRM4-202ENST00000455814 RGL3Q3MIN7 710 aa12.86□□□□□ -0.35
LYRM4-202ENST00000455814 ANKRD30BQ9BXX2 1392 aa12.85□□□□□ -0.35
LYRM4-202ENST00000455814 SOCS7O14512 581 aa12.85□□□□□ -0.35
LYRM4-202ENST00000455814 FOXD1Q16676 465 aa12.84□□□□□ -0.35
LYRM4-202ENST00000455814 SETBP1Q9Y6X0 1596 aa12.83□□□□□ -0.36
LYRM4-202ENST00000455814 STAC3Q96MF2 364 aa12.83□□□□□ -0.36
LYRM4-202ENST00000455814 CHD2O14647 1828 aaKnown RBP12.83□□□□□ -0.36
LYRM4-202ENST00000455814 KIF1BO60333 1816 aa12.83□□□□□ -0.36
LYRM4-202ENST00000455814 MYO5BQ9ULV0 1848 aa12.83□□□□□ -0.36
LYRM4-202ENST00000455814 JCADQ9P266 1359 aa12.81□□□□□ -0.36
LYRM4-202ENST00000455814 CLTCL1P53675 1640 aa12.81□□□□□ -0.36
LYRM4-202ENST00000455814 DCCP43146 1447 aa12.81□□□□□ -0.36
LYRM4-202ENST00000455814 ILDR2Q71H61 639 aa12.81□□□□□ -0.36
LYRM4-202ENST00000455814 METP08581 1390 aa12.81□□□□□ -0.36
LYRM4-202ENST00000455814 NEXMIFQ5QGS0 1516 aa12.8□□□□□ -0.36
LYRM4-202ENST00000455814 ALKQ9UM73 1620 aa12.8□□□□□ -0.36
LYRM4-202ENST00000455814 RAB3GAP2Q9H2M9 1393 aa12.8□□□□□ -0.36
LYRM4-202ENST00000455814 LRRC59Q96AG4 307 aaKnown RBP12.79□□□□□ -0.36
LYRM4-202ENST00000455814 PTPRUQ92729 1446 aa12.79□□□□□ -0.36
LYRM4-202ENST00000455814 SPATA31A6Q5VVP1 1343 aa12.78□□□□□ -0.36
LYRM4-202ENST00000455814 MEX3CQ5U5Q3 659 aaKnown RBP12.77□□□□□ -0.37
LYRM4-202ENST00000455814 MED1Q15648 1581 aaPredicted RBP12.77□□□□□ -0.37
LYRM4-202ENST00000455814 BRINP3Q76B58 766 aa12.76□□□□□ -0.37
LYRM4-202ENST00000455814 SIRT1Q96EB6 747 aa12.76□□□□□ -0.37
LYRM4-202ENST00000455814 ADGRL3Q9HAR2 1447 aa12.76□□□□□ -0.37
LYRM4-202ENST00000455814 XIRP1Q702N8 1843 aaKnown RBP12.76□□□□□ -0.37
LYRM4-202ENST00000455814 PTCH1Q13635 1447 aa12.75□□□□□ -0.37
LYRM4-202ENST00000455814 DHX57Q6P158 1386 aaKnown RBP12.75□□□□□ -0.37
LYRM4-202ENST00000455814 ADGRF5Q8IZF2 1346 aa12.75□□□□□ -0.37
LYRM4-202ENST00000455814 STK26Q9P289 416 aa12.75□□□□□ -0.37
LYRM4-202ENST00000455814 ROBO1Q9Y6N7 1651 aa12.75□□□□□ -0.37
LYRM4-202ENST00000455814 SPATA31E1Q6ZUB1 1445 aa12.74□□□□□ -0.37
LYRM4-202ENST00000455814 C14orf93Q9H972 538 aaKnown RBP12.74□□□□□ -0.37
LYRM4-202ENST00000455814 ZNF772Q68DY9 489 aaPredicted RBP12.73□□□□□ -0.37
LYRM4-202ENST00000455814 LRPPRCP42704 1394 aaKnown RBP12.72□□□□□ -0.37
LYRM4-202ENST00000455814 ABCC11Q96J66 1382 aa12.72□□□□□ -0.37
LYRM4-202ENST00000455814 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.72□□□□□ -0.37
LYRM4-202ENST00000455814 NRXN3Q9Y4C0 1643 aa12.72□□□□□ -0.37
LYRM4-202ENST00000455814 ROBO2Q9HCK4 1378 aa12.71□□□□□ -0.37
LYRM4-202ENST00000455814 POGKQ9P215 609 aa12.71□□□□□ -0.37
LYRM4-202ENST00000455814 XRN1Q8IZH2 1706 aaKnown RBP12.71□□□□□ -0.38
LYRM4-202ENST00000455814 MST1RQ04912 1400 aa12.71□□□□□ -0.38
LYRM4-202ENST00000455814 PRAG1Q86YV5 1406 aa12.71□□□□□ -0.38
LYRM4-202ENST00000455814 ESCO1Q5FWF5 840 aa12.7□□□□□ -0.38
LYRM4-202ENST00000455814 TMEM132EQ6IEE7 984 aa12.7□□□□□ -0.38
LYRM4-202ENST00000455814 DCAF11Q8TEB1 546 aa12.7□□□□□ -0.38
LYRM4-202ENST00000455814 PHLPP1O60346 1717 aa12.69□□□□□ -0.38
LYRM4-202ENST00000455814 NUTM2BA6NNL0 878 aaPredicted RBP12.69□□□□□ -0.38
LYRM4-202ENST00000455814 NUTM2EB1AL46 878 aaPredicted RBP12.69□□□□□ -0.38
LYRM4-202ENST00000455814 NUTM2AQ8IVF1 878 aaPredicted RBP12.69□□□□□ -0.38
LYRM4-202ENST00000455814 KDM2AQ9Y2K7 1162 aa12.69□□□□□ -0.38
LYRM4-202ENST00000455814 NPHP3Q7Z494 1330 aa12.68□□□□□ -0.38
LYRM4-202ENST00000455814 CFAP70Q5T0N1 1121 aa12.68□□□□□ -0.38
LYRM4-202ENST00000455814 PIK3C2GO75747 1445 aa12.68□□□□□ -0.38
LYRM4-202ENST00000455814 C1orf167Q5SNV9 1468 aa12.67□□□□□ -0.38
LYRM4-202ENST00000455814 AHDC1Q5TGY3 1603 aaPredicted RBP12.67□□□□□ -0.38
LYRM4-202ENST00000455814 PPLO60437 1756 aa12.67□□□□□ -0.38
LYRM4-202ENST00000455814 WAPLQ7Z5K2 1190 aa12.67□□□□□ -0.38
LYRM4-202ENST00000455814 YTHDC2Q9H6S0 1430 aaKnown RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms