RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 MYOM2P54296 1465 aa23.88■■□□□ 1.41
CCDC90B-202ENST00000455220 ZFYVE9O95405 1425 aa23.87■■□□□ 1.41
CCDC90B-202ENST00000455220 DCAF11Q8TEB1 546 aa23.87■■□□□ 1.41
CCDC90B-202ENST00000455220 SLIT1O75093 1534 aa23.87■■□□□ 1.41
CCDC90B-202ENST00000455220 TMEM2Q9UHN6 1383 aa23.87■■□□□ 1.41
CCDC90B-202ENST00000455220 ARHGAP23Q9P227 1491 aa23.87■■□□□ 1.41
CCDC90B-202ENST00000455220 PPP1R15AO75807 674 aaPredicted RBP23.86■■□□□ 1.41
CCDC90B-202ENST00000455220 THEMISQ8N1K5 641 aaPredicted RBP23.86■■□□□ 1.41
CCDC90B-202ENST00000455220 RIMS2Q9UQ26 1411 aa23.85■■□□□ 1.41
CCDC90B-202ENST00000455220 NRXN1Q9ULB1 1477 aa23.84■■□□□ 1.41
CCDC90B-202ENST00000455220 KDM2AQ9Y2K7 1162 aa23.82■■□□□ 1.4
CCDC90B-202ENST00000455220 PRAG1Q86YV5 1406 aa23.82■■□□□ 1.4
CCDC90B-202ENST00000455220 LMTK3Q96Q04 1460 aa23.8■■□□□ 1.4
CCDC90B-202ENST00000455220 VGFO15240 615 aaPredicted RBP23.79■■□□□ 1.4
CCDC90B-202ENST00000455220 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.79■■□□□ 1.4
CCDC90B-202ENST00000455220 ADGRF5Q8IZF2 1346 aa23.79■■□□□ 1.4
CCDC90B-202ENST00000455220 HDGFP51858 240 aaKnown RBP23.78■■□□□ 1.4
CCDC90B-202ENST00000455220 NBPF8Q3BBV2 869 aa23.78■■□□□ 1.4
CCDC90B-202ENST00000455220 PIK3C2GO75747 1445 aa23.77■■□□□ 1.4
CCDC90B-202ENST00000455220 NUTM2DQ5VT03 806 aaPredicted RBP23.75■■□□□ 1.39
CCDC90B-202ENST00000455220 LTKP29376 864 aa23.74■■□□□ 1.39
CCDC90B-202ENST00000455220 SCAF11Q99590 1463 aaKnown RBP23.74■■□□□ 1.39
CCDC90B-202ENST00000455220 EID1Q9Y6B2 187 aa23.73■■□□□ 1.39
CCDC90B-202ENST00000455220 KIAA1210Q9ULL0 1709 aa23.72■■□□□ 1.39
CCDC90B-202ENST00000455220 TRPM1Q7Z4N2 1603 aa23.72■■□□□ 1.39
CCDC90B-202ENST00000455220 TXNDC2Q86VQ3 553 aa23.72■■□□□ 1.39
CCDC90B-202ENST00000455220 RALGAPBQ86X10 1494 aa23.71■■□□□ 1.39
CCDC90B-202ENST00000455220 PLEKHG1Q9ULL1 1385 aa23.71■■□□□ 1.39
CCDC90B-202ENST00000455220 SETBP1Q9Y6X0 1596 aa23.71■■□□□ 1.39
CCDC90B-202ENST00000455220 NRXN3Q9Y4C0 1643 aa23.7■■□□□ 1.38
CCDC90B-202ENST00000455220 POLR1AO95602 1720 aaPredicted RBP23.69■■□□□ 1.38
CCDC90B-202ENST00000455220 ANKLE2Q86XL3 938 aa23.69■■□□□ 1.38
CCDC90B-202ENST00000455220 LAMC1P11047 1609 aa23.69■■□□□ 1.38
CCDC90B-202ENST00000455220 MED14O60244 1454 aa23.67■■□□□ 1.38
CCDC90B-202ENST00000455220 C14orf93Q9H972 538 aaKnown RBP23.66■■□□□ 1.38
CCDC90B-202ENST00000455220 IQGAP1P46940 1657 aa23.66■■□□□ 1.38
CCDC90B-202ENST00000455220 ALKQ9UM73 1620 aa23.65■■□□□ 1.38
CCDC90B-202ENST00000455220 GPRASP1Q5JY77 1395 aa23.65■■□□□ 1.38
CCDC90B-202ENST00000455220 SETD1AO15047 1707 aaKnown RBP23.65■■□□□ 1.38
CCDC90B-202ENST00000455220 HSPA2P54652 639 aa23.65■■□□□ 1.38
CCDC90B-202ENST00000455220 CFAP70Q5T0N1 1121 aa23.64■■□□□ 1.37
CCDC90B-202ENST00000455220 ADAMTS13Q76LX8 1427 aa23.63■■□□□ 1.37
CCDC90B-202ENST00000455220 ADGRB1O14514 1584 aa23.62■■□□□ 1.37
CCDC90B-202ENST00000455220 DIP2AQ14689 1571 aa23.61■■□□□ 1.37
CCDC90B-202ENST00000455220 ROCK2O75116 1388 aaKnown RBP23.61■■□□□ 1.37
CCDC90B-202ENST00000455220 NBPF1Q3BBV0 1214 aa23.61■■□□□ 1.37
CCDC90B-202ENST00000455220 NPHP4O75161 1426 aaPredicted RBP23.61■■□□□ 1.37
CCDC90B-202ENST00000455220 ASXL1Q8IXJ9 1541 aa23.6■■□□□ 1.37
CCDC90B-202ENST00000455220 NCKAP5LQ9HCH0 1330 aa23.6■■□□□ 1.37
CCDC90B-202ENST00000455220 STRCQ7RTU9 1775 aa23.59■■□□□ 1.37
CCDC90B-202ENST00000455220 SENP3Q9H4L4 574 aaPredicted RBP23.57■■□□□ 1.36
CCDC90B-202ENST00000455220 TBX22Q9Y458 520 aa23.56■■□□□ 1.36
CCDC90B-202ENST00000455220 BCANQ96GW7 911 aa23.55■■□□□ 1.36
CCDC90B-202ENST00000455220 CARD11Q9BXL7 1154 aa23.55■■□□□ 1.36
CCDC90B-202ENST00000455220 METP08581 1390 aa23.53■■□□□ 1.36
CCDC90B-202ENST00000455220 SLC26A8Q96RN1 970 aa23.52■■□□□ 1.36
CCDC90B-202ENST00000455220 TMEM132EQ6IEE7 984 aa23.52■■□□□ 1.36
CCDC90B-202ENST00000455220 PIK3R4Q99570 1358 aa23.5■■□□□ 1.35
CCDC90B-202ENST00000455220 YTHDC2Q9H6S0 1430 aaKnown RBP23.5■■□□□ 1.35
CCDC90B-202ENST00000455220 LRPPRCP42704 1394 aaKnown RBP23.48■■□□□ 1.35
CCDC90B-202ENST00000455220 USP47Q96K76 1375 aa23.48■■□□□ 1.35
CCDC90B-202ENST00000455220 KNDC1Q76NI1 1749 aa23.47■■□□□ 1.35
CCDC90B-202ENST00000455220 TECPR2O15040 1411 aa23.46■■□□□ 1.35
CCDC90B-202ENST00000455220 PTPRUQ92729 1446 aa23.46■■□□□ 1.35
CCDC90B-202ENST00000455220 ABCC11Q96J66 1382 aa23.46■■□□□ 1.35
CCDC90B-202ENST00000455220 DLC1Q96QB1 1528 aa23.44■■□□□ 1.34
CCDC90B-202ENST00000455220 EIF4G2P78344 907 aaKnown RBP eCLIP23.44■■□□□ 1.34
CCDC90B-202ENST00000455220 ARHGEF28Q8N1W1 1705 aaKnown RBP23.44■■□□□ 1.34
CCDC90B-202ENST00000455220 CHD2O14647 1828 aaKnown RBP23.44■■□□□ 1.34
CCDC90B-202ENST00000455220 XRN1Q8IZH2 1706 aaKnown RBP23.44■■□□□ 1.34
CCDC90B-202ENST00000455220 EIF3AQ14152 1382 aaKnown RBP23.43■■□□□ 1.34
CCDC90B-202ENST00000455220 CPS1P31327 1500 aa23.42■■□□□ 1.34
CCDC90B-202ENST00000455220 HSPA5P11021 654 aaKnown RBP23.41■■□□□ 1.34
CCDC90B-202ENST00000455220 TRAK1Q9UPV9 953 aa23.41■■□□□ 1.34
CCDC90B-202ENST00000455220 NWD1Q149M9 1564 aa23.41■■□□□ 1.34
CCDC90B-202ENST00000455220 DMRT2Q9Y5R5 561 aa23.4■■□□□ 1.34
CCDC90B-202ENST00000455220 STK26Q9P289 416 aa23.4■■□□□ 1.34
CCDC90B-202ENST00000455220 PTCH1Q13635 1447 aa23.39■■□□□ 1.33
CCDC90B-202ENST00000455220 SIRT1Q96EB6 747 aa23.39■■□□□ 1.33
CCDC90B-202ENST00000455220 AMOTL2Q9Y2J4 779 aa23.39■■□□□ 1.33
CCDC90B-202ENST00000455220 FAM135BQ49AJ0 1406 aa23.37■■□□□ 1.33
CCDC90B-202ENST00000455220 ST20-MTHFSA0A0A6YYL1 179 aa23.37■■□□□ 1.33
CCDC90B-202ENST00000455220 KCNA6P17658 529 aa23.36■■□□□ 1.33
CCDC90B-202ENST00000455220 ROBO2Q9HCK4 1378 aa23.35■■□□□ 1.33
CCDC90B-202ENST00000455220 CENPJQ9HC77 1338 aaPredicted RBP23.35■■□□□ 1.33
CCDC90B-202ENST00000455220 SBNO2Q9Y2G9 1366 aa23.34■■□□□ 1.33
CCDC90B-202ENST00000455220 QRICH2Q9H0J4 1663 aa23.33■■□□□ 1.33
CCDC90B-202ENST00000455220 NKTRP30414 1462 aaKnown RBP23.32■■□□□ 1.32
CCDC90B-202ENST00000455220 PRAM1Q96QH2 718 aa23.32■■□□□ 1.32
CCDC90B-202ENST00000455220 TESK2Q96S53 571 aa23.32■■□□□ 1.32
CCDC90B-202ENST00000455220 STRCP1A6NGW2 1772 aa23.32■■□□□ 1.32
CCDC90B-202ENST00000455220 PLEKHH1Q9ULM0 1364 aa23.31■■□□□ 1.32
CCDC90B-202ENST00000455220 HIRIP3Q9BW71 556 aaPredicted RBP23.31■■□□□ 1.32
CCDC90B-202ENST00000455220 WAPLQ7Z5K2 1190 aa23.28■■□□□ 1.32
CCDC90B-202ENST00000455220 POGKQ9P215 609 aa23.28■■□□□ 1.32
CCDC90B-202ENST00000455220 ILDR1Q86SU0 546 aaPredicted RBP23.27■■□□□ 1.32
CCDC90B-202ENST00000455220 SLC24A1O60721 1099 aa23.26■■□□□ 1.31
CCDC90B-202ENST00000455220 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.25■■□□□ 1.31
CCDC90B-202ENST00000455220 ZNF335Q9H4Z2 1342 aaPredicted RBP23.24■■□□□ 1.31
CCDC90B-202ENST00000455220 ADGRB2O60241 1585 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms