RNA–Protein interactions for RNA: ENST00000455113.6

COPS7A-202, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-202ENST00000455113 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.39■■□□□ 1.81
COPS7A-202ENST00000455113 SETD5Q9C0A6 1442 aa26.37■■□□□ 1.81
COPS7A-202ENST00000455113 RIMS2Q9UQ26 1411 aa26.36■■□□□ 1.81
COPS7A-202ENST00000455113 PCGF6Q9BYE7 350 aa26.34■■□□□ 1.81
COPS7A-202ENST00000455113 TRPM2O94759 1503 aa26.33■■□□□ 1.81
COPS7A-202ENST00000455113 ZNF326Q5BKZ1 582 aaKnown RBP26.33■■□□□ 1.81
COPS7A-202ENST00000455113 ZFYVE9O95405 1425 aa26.33■■□□□ 1.81
COPS7A-202ENST00000455113 SLC26A8Q96RN1 970 aa26.3■■□□□ 1.8
COPS7A-202ENST00000455113 PLEKHG1Q9ULL1 1385 aa26.29■■□□□ 1.8
COPS7A-202ENST00000455113 MPHOSPH9Q99550 1183 aa26.29■■□□□ 1.8
COPS7A-202ENST00000455113 KIF1BO60333 1816 aa26.28■■□□□ 1.8
COPS7A-202ENST00000455113 NUTM2DQ5VT03 806 aaPredicted RBP26.28■■□□□ 1.8
COPS7A-202ENST00000455113 CLTCL1P53675 1640 aa26.27■■□□□ 1.8
COPS7A-202ENST00000455113 UBAP1LF5GYI3 381 aa26.27■■□□□ 1.8
COPS7A-202ENST00000455113 SENP3Q9H4L4 574 aaPredicted RBP26.27■■□□□ 1.8
COPS7A-202ENST00000455113 RAB3GAP2Q9H2M9 1393 aa26.26■■□□□ 1.79
COPS7A-202ENST00000455113 STRCP1A6NGW2 1772 aa26.23■■□□□ 1.79
COPS7A-202ENST00000455113 FOXD1Q16676 465 aa26.23■■□□□ 1.79
COPS7A-202ENST00000455113 TOM1O60784 492 aa26.22■■□□□ 1.79
COPS7A-202ENST00000455113 KCNA6P17658 529 aa26.22■■□□□ 1.79
COPS7A-202ENST00000455113 LRRC7Q96NW7 1537 aa26.2■■□□□ 1.78
COPS7A-202ENST00000455113 CCDC144AA2RUR9 1427 aa26.2■■□□□ 1.78
COPS7A-202ENST00000455113 TBX22Q9Y458 520 aa26.19■■□□□ 1.78
COPS7A-202ENST00000455113 DIP2AQ14689 1571 aa26.15■■□□□ 1.78
COPS7A-202ENST00000455113 SCAF1Q9H7N4 1312 aaKnown RBP26.15■■□□□ 1.78
COPS7A-202ENST00000455113 HRCP23327 699 aa26.14■■□□□ 1.78
COPS7A-202ENST00000455113 PROSER2Q86WR7 435 aaPredicted RBP26.14■■□□□ 1.77
COPS7A-202ENST00000455113 RPGRIP1LQ68CZ1 1315 aa26.13■■□□□ 1.77
COPS7A-202ENST00000455113 VGFO15240 615 aaPredicted RBP26.13■■□□□ 1.77
COPS7A-202ENST00000455113 ADAMTS13Q76LX8 1427 aa26.12■■□□□ 1.77
COPS7A-202ENST00000455113 NEXMIFQ5QGS0 1516 aa26.12■■□□□ 1.77
COPS7A-202ENST00000455113 NKTRP30414 1462 aaKnown RBP26.11■■□□□ 1.77
COPS7A-202ENST00000455113 CHD2O14647 1828 aaKnown RBP26.11■■□□□ 1.77
COPS7A-202ENST00000455113 PIP4K2BP78356 416 aa26.11■■□□□ 1.77
COPS7A-202ENST00000455113 PIK3R4Q99570 1358 aa26.11■■□□□ 1.77
COPS7A-202ENST00000455113 NWD1Q149M9 1564 aa26.11■■□□□ 1.77
COPS7A-202ENST00000455113 TMEM94Q12767 1356 aa26.09■■□□□ 1.77
COPS7A-202ENST00000455113 SETBP1Q9Y6X0 1596 aa26.08■■□□□ 1.76
COPS7A-202ENST00000455113 RGL3Q3MIN7 710 aa26.06■■□□□ 1.76
COPS7A-202ENST00000455113 XIRP1Q702N8 1843 aaKnown RBP26.04■■□□□ 1.76
COPS7A-202ENST00000455113 RBM33Q96EV2 1170 aaKnown RBP26.02■■□□□ 1.76
COPS7A-202ENST00000455113 AMOTL2Q9Y2J4 779 aa26.02■■□□□ 1.76
COPS7A-202ENST00000455113 NRXN3Q9Y4C0 1643 aa26.02■■□□□ 1.76
COPS7A-202ENST00000455113 PPLO60437 1756 aa26.02■■□□□ 1.76
COPS7A-202ENST00000455113 MSH6P52701 1360 aa26.01■■□□□ 1.75
COPS7A-202ENST00000455113 C14orf37Q86TY3 774 aa26.01■■□□□ 1.75
COPS7A-202ENST00000455113 SPATA31E1Q6ZUB1 1445 aa25.98■■□□□ 1.75
COPS7A-202ENST00000455113 ANKRD30BQ9BXX2 1392 aa25.98■■□□□ 1.75
COPS7A-202ENST00000455113 NCOA3Q9Y6Q9 1424 aa25.97■■□□□ 1.75
COPS7A-202ENST00000455113 METP08581 1390 aa25.96■■□□□ 1.75
COPS7A-202ENST00000455113 PTPRUQ92729 1446 aa25.94■■□□□ 1.74
COPS7A-202ENST00000455113 ALKQ9UM73 1620 aa25.93■■□□□ 1.74
COPS7A-202ENST00000455113 ADGRF5Q8IZF2 1346 aa25.9■■□□□ 1.74
COPS7A-202ENST00000455113 IFT172Q9UG01 1749 aa25.9■■□□□ 1.74
COPS7A-202ENST00000455113 HSPA1LP34931 641 aa25.9■■□□□ 1.74
COPS7A-202ENST00000455113 C19orf44Q9H6X5 657 aa25.9■■□□□ 1.74
COPS7A-202ENST00000455113 XRN1Q8IZH2 1706 aaKnown RBP25.9■■□□□ 1.74
COPS7A-202ENST00000455113 ATF3P18847 181 aa25.88■■□□□ 1.73
COPS7A-202ENST00000455113 CADPS2Q86UW7 1296 aa25.87■■□□□ 1.73
COPS7A-202ENST00000455113 SETD1AO15047 1707 aaKnown RBP25.85■■□□□ 1.73
COPS7A-202ENST00000455113 SLAIN2Q9P270 581 aa25.85■■□□□ 1.73
COPS7A-202ENST00000455113 FAM135BQ49AJ0 1406 aa25.84■■□□□ 1.73
COPS7A-202ENST00000455113 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.82■■□□□ 1.72
COPS7A-202ENST00000455113 PIK3C2GO75747 1445 aa25.82■■□□□ 1.72
COPS7A-202ENST00000455113 MYOM2P54296 1465 aa25.81■■□□□ 1.72
COPS7A-202ENST00000455113 PTCH1Q13635 1447 aa25.8■■□□□ 1.72
COPS7A-202ENST00000455113 ROBO1Q9Y6N7 1651 aa25.79■■□□□ 1.72
COPS7A-202ENST00000455113 STAC3Q96MF2 364 aa25.79■■□□□ 1.72
COPS7A-202ENST00000455113 DCAF11Q8TEB1 546 aa25.78■■□□□ 1.72
COPS7A-202ENST00000455113 DCCP43146 1447 aa25.78■■□□□ 1.72
COPS7A-202ENST00000455113 KDM2AQ9Y2K7 1162 aa25.77■■□□□ 1.72
COPS7A-202ENST00000455113 C14orf93Q9H972 538 aaKnown RBP25.75■■□□□ 1.71
COPS7A-202ENST00000455113 STK26Q9P289 416 aa25.75■■□□□ 1.71
COPS7A-202ENST00000455113 ADGRL3Q9HAR2 1447 aa25.75■■□□□ 1.71
COPS7A-202ENST00000455113 LAMC1P11047 1609 aa25.74■■□□□ 1.71
COPS7A-202ENST00000455113 ROBO2Q9HCK4 1378 aa25.74■■□□□ 1.71
COPS7A-202ENST00000455113 NRXN1Q9ULB1 1477 aa25.74■■□□□ 1.71
COPS7A-202ENST00000455113 PRAG1Q86YV5 1406 aa25.74■■□□□ 1.71
COPS7A-202ENST00000455113 TMEM132EQ6IEE7 984 aa25.74■■□□□ 1.71
COPS7A-202ENST00000455113 CFAP70Q5T0N1 1121 aa25.72■■□□□ 1.71
COPS7A-202ENST00000455113 LRPPRCP42704 1394 aaKnown RBP25.72■■□□□ 1.71
COPS7A-202ENST00000455113 DISP3Q9P2K9 1392 aa25.72■■□□□ 1.71
COPS7A-202ENST00000455113 DHX57Q6P158 1386 aaKnown RBP25.71■■□□□ 1.71
COPS7A-202ENST00000455113 NALCNQ8IZF0 1738 aa25.69■■□□□ 1.7
COPS7A-202ENST00000455113 ABCC11Q96J66 1382 aa25.69■■□□□ 1.7
COPS7A-202ENST00000455113 YTHDC2Q9H6S0 1430 aaKnown RBP25.69■■□□□ 1.7
COPS7A-202ENST00000455113 TECPR2O15040 1411 aa25.67■■□□□ 1.7
COPS7A-202ENST00000455113 KNDC1Q76NI1 1749 aa25.66■■□□□ 1.7
COPS7A-202ENST00000455113 ASXL1Q8IXJ9 1541 aa25.65■■□□□ 1.7
COPS7A-202ENST00000455113 PHLPP1O60346 1717 aa25.65■■□□□ 1.7
COPS7A-202ENST00000455113 MST1RQ04912 1400 aa25.64■■□□□ 1.7
COPS7A-202ENST00000455113 WAPLQ7Z5K2 1190 aa25.63■■□□□ 1.69
COPS7A-202ENST00000455113 BRINP3Q76B58 766 aa25.63■■□□□ 1.69
COPS7A-202ENST00000455113 SIRT1Q96EB6 747 aa25.62■■□□□ 1.69
COPS7A-202ENST00000455113 NEUROD1Q13562 356 aa25.57■■□□□ 1.68
COPS7A-202ENST00000455113 POGKQ9P215 609 aa25.57■■□□□ 1.68
COPS7A-202ENST00000455113 MED1Q15648 1581 aaPredicted RBP25.57■■□□□ 1.68
COPS7A-202ENST00000455113 C1orf167Q5SNV9 1468 aa25.57■■□□□ 1.68
COPS7A-202ENST00000455113 CCER1Q8TC90 406 aaPredicted RBP25.57■■□□□ 1.68
COPS7A-202ENST00000455113 PHF23Q9BUL5 403 aaPredicted RBP25.57■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms