RNA–Protein interactions for RNA: ENST00000454741.5

TTC28-AS1-219, TTC28 antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene TTC28-AS1, Length 5,064 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-AS1-219ENST00000454741 G3V3G9 751 aa18.73■□□□□ 0.59
TTC28-AS1-219ENST00000454741 DCAF8Q5TAQ9 597 aa18.73■□□□□ 0.59
TTC28-AS1-219ENST00000454741 RUNDC1Q96C34 613 aa18.72■□□□□ 0.59
TTC28-AS1-219ENST00000454741 GOLGA6L19H0YKK7 550 aa18.71■□□□□ 0.59
TTC28-AS1-219ENST00000454741 ELL2O00472 640 aaPredicted RBP18.71■□□□□ 0.59
TTC28-AS1-219ENST00000454741 BCL2L13Q9BXK5 485 aa18.71■□□□□ 0.59
TTC28-AS1-219ENST00000454741 AKAP17AQ02040 695 aaKnown RBP18.71■□□□□ 0.59
TTC28-AS1-219ENST00000454741 SYNE3Q6ZMZ3 975 aa18.71■□□□□ 0.59
TTC28-AS1-219ENST00000454741 FGD6Q6ZV73 1430 aa18.71■□□□□ 0.59
TTC28-AS1-219ENST00000454741 MRC2Q9UBG0 1479 aa18.7■□□□□ 0.58
TTC28-AS1-219ENST00000454741 DDX58O95786 925 aaKnown RBP18.7■□□□□ 0.58
TTC28-AS1-219ENST00000454741 GSE1Q14687 1217 aa18.7■□□□□ 0.58
TTC28-AS1-219ENST00000454741 HSP90AB4PQ58FF6 505 aa18.69■□□□□ 0.58
TTC28-AS1-219ENST00000454741 BECN2A8MW95 431 aa18.69■□□□□ 0.58
TTC28-AS1-219ENST00000454741 PLIN1O60240 522 aa18.69■□□□□ 0.58
TTC28-AS1-219ENST00000454741 TSR1Q2NL82 804 aaKnown RBP18.69■□□□□ 0.58
TTC28-AS1-219ENST00000454741 MARCH6O60337 910 aa18.69■□□□□ 0.58
TTC28-AS1-219ENST00000454741 TTC5Q8N0Z6 440 aa18.69■□□□□ 0.58
TTC28-AS1-219ENST00000454741 CEP89Q96ST8 783 aa18.69■□□□□ 0.58
TTC28-AS1-219ENST00000454741 CCDC7Q96M83 1385 aa18.69■□□□□ 0.58
TTC28-AS1-219ENST00000454741 RUSC2Q8N2Y8 1516 aa18.69■□□□□ 0.58
TTC28-AS1-219ENST00000454741 NUTM2FA1L443 756 aa18.68■□□□□ 0.58
TTC28-AS1-219ENST00000454741 GNAI1P63096 354 aa18.68■□□□□ 0.58
TTC28-AS1-219ENST00000454741 CHMP5Q9NZZ3 219 aa18.68■□□□□ 0.58
TTC28-AS1-219ENST00000454741 MINK1Q8N4C8 1332 aaPredicted RBP18.68■□□□□ 0.58
TTC28-AS1-219ENST00000454741 C9orf78Q9NZ63 289 aaPredicted RBP18.68■□□□□ 0.58
TTC28-AS1-219ENST00000454741 TPM1P09493 284 aa18.68■□□□□ 0.58
TTC28-AS1-219ENST00000454741 IFT140Q96RY7 1462 aa18.67■□□□□ 0.58
TTC28-AS1-219ENST00000454741 RNF20Q5VTR2 975 aa18.67■□□□□ 0.58
TTC28-AS1-219ENST00000454741 RIPK4P57078 832 aa18.67■□□□□ 0.58
TTC28-AS1-219ENST00000454741 TPD52L1Q16890 204 aaPredicted RBP18.65■□□□□ 0.58
TTC28-AS1-219ENST00000454741 RSPH6AQ9H0K4 717 aa18.65■□□□□ 0.58
TTC28-AS1-219ENST00000454741 TPM2P07951 284 aa18.64■□□□□ 0.58
TTC28-AS1-219ENST00000454741 IFIT2P09913 472 aaKnown RBP18.64■□□□□ 0.58
TTC28-AS1-219ENST00000454741 CFTRP13569 1480 aa18.64■□□□□ 0.58
TTC28-AS1-219ENST00000454741 NUCB2P80303 420 aa18.64■□□□□ 0.57
TTC28-AS1-219ENST00000454741 CNTLNQ9NXG0 1405 aa18.63■□□□□ 0.57
TTC28-AS1-219ENST00000454741 INTS3Q68E01 1043 aaKnown RBP18.63■□□□□ 0.57
TTC28-AS1-219ENST00000454741 BRD4O60885 1362 aaPredicted RBP18.63■□□□□ 0.57
TTC28-AS1-219ENST00000454741 A0A0U1RQG5 324 aaPredicted RBP18.62■□□□□ 0.57
TTC28-AS1-219ENST00000454741 TNNT3P45378 269 aaPredicted RBP18.62■□□□□ 0.57
TTC28-AS1-219ENST00000454741 TRIM29Q14134 588 aa18.62■□□□□ 0.57
TTC28-AS1-219ENST00000454741 AMOTL1Q8IY63 956 aa18.62■□□□□ 0.57
TTC28-AS1-219ENST00000454741 KIF7Q2M1P5 1343 aa18.62■□□□□ 0.57
TTC28-AS1-219ENST00000454741 EVA1CP58658 441 aa18.62■□□□□ 0.57
TTC28-AS1-219ENST00000454741 FOXD4L5Q5VV16 416 aaPredicted RBP18.61■□□□□ 0.57
TTC28-AS1-219ENST00000454741 FOXD4L4Q8WXT5 416 aaPredicted RBP18.61■□□□□ 0.57
TTC28-AS1-219ENST00000454741 CREBRFQ8IUR6 639 aa18.61■□□□□ 0.57
TTC28-AS1-219ENST00000454741 SYNJ2O15056 1496 aa18.61■□□□□ 0.57
TTC28-AS1-219ENST00000454741 G3BP1Q13283 466 aaKnown RBP eCLIP18.61■□□□□ 0.57
TTC28-AS1-219ENST00000454741 CCDC47Q96A33 483 aaKnown RBP18.6■□□□□ 0.57
TTC28-AS1-219ENST00000454741 ANKRD50Q9ULJ7 1429 aa18.6■□□□□ 0.57
TTC28-AS1-219ENST00000454741 ERC2O15083 957 aa18.6■□□□□ 0.57
TTC28-AS1-219ENST00000454741 NOL10Q9BSC4 688 aaKnown RBP18.6■□□□□ 0.57
TTC28-AS1-219ENST00000454741 HOOK1Q9UJC3 728 aaKnown RBP18.6■□□□□ 0.57
TTC28-AS1-219ENST00000454741 WASHC2AQ641Q2 1341 aa18.6■□□□□ 0.57
TTC28-AS1-219ENST00000454741 FYCO1Q9BQS8 1478 aa18.59■□□□□ 0.57
TTC28-AS1-219ENST00000454741 FKBP5Q13451 457 aaPredicted RBP18.59■□□□□ 0.57
TTC28-AS1-219ENST00000454741 PRG4Q92954 1404 aaPredicted RBP18.59■□□□□ 0.57
TTC28-AS1-219ENST00000454741 CPLX1O14810 134 aa18.59■□□□□ 0.57
TTC28-AS1-219ENST00000454741 TRDNQ13061 729 aa18.59■□□□□ 0.57
TTC28-AS1-219ENST00000454741 ANKRD20A12PQ8NF67 263 aa18.59■□□□□ 0.57
TTC28-AS1-219ENST00000454741 CCDC70Q6NSX1 233 aa18.58■□□□□ 0.57
TTC28-AS1-219ENST00000454741 GPS2Q13227 327 aa18.58■□□□□ 0.57
TTC28-AS1-219ENST00000454741 EIF2S2P20042 333 aaKnown RBP18.58■□□□□ 0.56
TTC28-AS1-219ENST00000454741 LRRC9Q6ZRR7 1453 aa18.57■□□□□ 0.56
TTC28-AS1-219ENST00000454741 MCTP1Q6DN14 999 aa18.57■□□□□ 0.56
TTC28-AS1-219ENST00000454741 CASKIN1Q8WXD9 1431 aa18.57■□□□□ 0.56
TTC28-AS1-219ENST00000454741 ANO2Q9NQ90 1003 aa18.57■□□□□ 0.56
TTC28-AS1-219ENST00000454741 HMGXB3Q12766 1538 aa18.56■□□□□ 0.56
TTC28-AS1-219ENST00000454741 IPO7O95373 1038 aaKnown RBP18.56■□□□□ 0.56
TTC28-AS1-219ENST00000454741 PES1O00541 588 aaKnown RBP18.56■□□□□ 0.56
TTC28-AS1-219ENST00000454741 ATF3P18847 181 aa18.55■□□□□ 0.56
TTC28-AS1-219ENST00000454741 WWC1Q8IX03 1113 aa18.55■□□□□ 0.56
TTC28-AS1-219ENST00000454741 PSME1Q06323 249 aa18.55■□□□□ 0.56
TTC28-AS1-219ENST00000454741 SLC4A3P48751 1232 aa18.55■□□□□ 0.56
TTC28-AS1-219ENST00000454741 HSP90AA2PQ14568 343 aaPredicted RBP18.55■□□□□ 0.56
TTC28-AS1-219ENST00000454741 VPS53Q5VIR6 699 aa18.54■□□□□ 0.56
TTC28-AS1-219ENST00000454741 CC2D2AQ9P2K1 1620 aa18.54■□□□□ 0.56
TTC28-AS1-219ENST00000454741 TSPYL4Q9UJ04 414 aa18.54■□□□□ 0.56
TTC28-AS1-219ENST00000454741 SMC3Q9UQE7 1217 aa18.53■□□□□ 0.56
TTC28-AS1-219ENST00000454741 RRBP1Q9P2E9 1410 aaKnown RBP18.53■□□□□ 0.56
TTC28-AS1-219ENST00000454741 NCBP3Q53F19 620 aaKnown RBP18.53■□□□□ 0.56
TTC28-AS1-219ENST00000454741 ARID3AQ99856 593 aa18.53■□□□□ 0.56
TTC28-AS1-219ENST00000454741 C22orf23Q9BZE7 217 aa18.52■□□□□ 0.56
TTC28-AS1-219ENST00000454741 CDC45O75419 566 aa18.52■□□□□ 0.55
TTC28-AS1-219ENST00000454741 BICD2Q8TD16 824 aa18.52■□□□□ 0.55
TTC28-AS1-219ENST00000454741 SCAPERQ9BY12 1400 aa18.52■□□□□ 0.55
TTC28-AS1-219ENST00000454741 KIF21BO75037 1637 aa18.52■□□□□ 0.55
TTC28-AS1-219ENST00000454741 HFM1A2PYH4 1435 aa18.51■□□□□ 0.55
TTC28-AS1-219ENST00000454741 RAPGEF4Q8WZA2 1011 aa18.51■□□□□ 0.55
TTC28-AS1-219ENST00000454741 MEX3CQ5U5Q3 659 aaKnown RBP18.5■□□□□ 0.55
TTC28-AS1-219ENST00000454741 NCOA2Q15596 1464 aa18.5■□□□□ 0.55
TTC28-AS1-219ENST00000454741 GNAI3P08754 354 aa18.49■□□□□ 0.55
TTC28-AS1-219ENST00000454741 APPP05067 770 aa18.49■□□□□ 0.55
TTC28-AS1-219ENST00000454741 ERICH2A1L162 156 aa18.49■□□□□ 0.55
TTC28-AS1-219ENST00000454741 SAFBQ15424 915 aaKnown RBP eCLIP18.49■□□□□ 0.55
TTC28-AS1-219ENST00000454741 ARHGAP5Q13017 1502 aa18.48■□□□□ 0.55
TTC28-AS1-219ENST00000454741 CCDC73Q6ZRK6 1079 aa18.48■□□□□ 0.55
TTC28-AS1-219ENST00000454741 LNPKQ9C0E8 428 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms