RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 MAP3K4Q9Y6R4 1608 aa16.83■□□□□ 0.29
ECHDC1-209ENST00000454591 MYO3AQ8NEV4 1616 aa16.82■□□□□ 0.28
ECHDC1-209ENST00000454591 SLC24A1O60721 1099 aa16.81■□□□□ 0.28
ECHDC1-209ENST00000454591 AFAP1Q8N556 730 aa16.81■□□□□ 0.28
ECHDC1-209ENST00000454591 NRXN1Q9ULB1 1477 aa16.81■□□□□ 0.28
ECHDC1-209ENST00000454591 CDCA8Q53HL2 280 aa16.8■□□□□ 0.28
ECHDC1-209ENST00000454591 ASXL2Q76L83 1435 aa16.8■□□□□ 0.28
ECHDC1-209ENST00000454591 EIF3AQ14152 1382 aaKnown RBP16.79■□□□□ 0.28
ECHDC1-209ENST00000454591 KDM5AP29375 1690 aaKnown RBP16.79■□□□□ 0.28
ECHDC1-209ENST00000454591 ZNF518AQ6AHZ1 1483 aa16.79■□□□□ 0.28
ECHDC1-209ENST00000454591 PPRC1Q5VV67 1664 aaKnown RBP16.78■□□□□ 0.28
ECHDC1-209ENST00000454591 ABCA6Q8N139 1617 aa16.78■□□□□ 0.28
ECHDC1-209ENST00000454591 PANK3Q9H999 370 aa16.78■□□□□ 0.28
ECHDC1-209ENST00000454591 SETBP1Q9Y6X0 1596 aa16.77■□□□□ 0.28
ECHDC1-209ENST00000454591 PIK3C2GO75747 1445 aa16.76■□□□□ 0.27
ECHDC1-209ENST00000454591 B4GALNT3Q6L9W6 998 aa16.76■□□□□ 0.27
ECHDC1-209ENST00000454591 ASXL1Q8IXJ9 1541 aa16.76■□□□□ 0.27
ECHDC1-209ENST00000454591 SBNO2Q9Y2G9 1366 aa16.76■□□□□ 0.27
ECHDC1-209ENST00000454591 ADGRB3O60242 1522 aa16.76■□□□□ 0.27
ECHDC1-209ENST00000454591 MLH3Q9UHC1 1453 aa16.75■□□□□ 0.27
ECHDC1-209ENST00000454591 MROH2AA6NES4 1674 aa16.74■□□□□ 0.27
ECHDC1-209ENST00000454591 RRP1P56182 461 aaKnown RBP16.73■□□□□ 0.27
ECHDC1-209ENST00000454591 AMER1Q5JTC6 1135 aaPredicted RBP16.71■□□□□ 0.27
ECHDC1-209ENST00000454591 POGZQ7Z3K3 1410 aa16.71■□□□□ 0.27
ECHDC1-209ENST00000454591 FRMPD1Q5SYB0 1578 aa16.71■□□□□ 0.27
ECHDC1-209ENST00000454591 HECW2Q9P2P5 1572 aa16.71■□□□□ 0.27
ECHDC1-209ENST00000454591 PPLO60437 1756 aa16.71■□□□□ 0.27
ECHDC1-209ENST00000454591 KIF3BO15066 747 aa16.7■□□□□ 0.26
ECHDC1-209ENST00000454591 RCAN3Q9UKA8 241 aa16.7■□□□□ 0.26
ECHDC1-209ENST00000454591 ERVK-7P63135 1459 aa16.69■□□□□ 0.26
ECHDC1-209ENST00000454591 ZC3H13Q5T200 1668 aaKnown RBP16.69■□□□□ 0.26
ECHDC1-209ENST00000454591 CNGB1Q14028 1251 aaPredicted RBP16.69■□□□□ 0.26
ECHDC1-209ENST00000454591 CCDC136Q96JN2 1154 aa16.69■□□□□ 0.26
ECHDC1-209ENST00000454591 CC2D1BQ5T0F9 858 aaKnown RBP16.67■□□□□ 0.26
ECHDC1-209ENST00000454591 KNSTRNQ9Y448 316 aa16.67■□□□□ 0.26
ECHDC1-209ENST00000454591 UGGT1Q9NYU2 1555 aa16.67■□□□□ 0.26
ECHDC1-209ENST00000454591 PPP2R1AP30153 589 aa16.66■□□□□ 0.26
ECHDC1-209ENST00000454591 NEO1Q92859 1461 aa16.66■□□□□ 0.26
ECHDC1-209ENST00000454591 PIK3C2BO00750 1634 aa16.65■□□□□ 0.26
ECHDC1-209ENST00000454591 USP32Q8NFA0 1604 aa16.64■□□□□ 0.25
ECHDC1-209ENST00000454591 ZNF521Q96K83 1311 aa16.64■□□□□ 0.25
ECHDC1-209ENST00000454591 CD109Q6YHK3 1445 aa16.63■□□□□ 0.25
ECHDC1-209ENST00000454591 ADGRB1O14514 1584 aa16.62■□□□□ 0.25
ECHDC1-209ENST00000454591 ABCC3O15438 1527 aa16.62■□□□□ 0.25
ECHDC1-209ENST00000454591 NPATQ14207 1427 aa16.62■□□□□ 0.25
ECHDC1-209ENST00000454591 RPGRIP1LQ68CZ1 1315 aa16.62■□□□□ 0.25
ECHDC1-209ENST00000454591 NGEFQ8N5V2 710 aa16.62■□□□□ 0.25
ECHDC1-209ENST00000454591 CAMSAP1Q5T5Y3 1602 aa16.62■□□□□ 0.25
ECHDC1-209ENST00000454591 NOS1P29475 1434 aa16.61■□□□□ 0.25
ECHDC1-209ENST00000454591 ADGRF5Q8IZF2 1346 aa16.61■□□□□ 0.25
ECHDC1-209ENST00000454591 ARHGAP31Q2M1Z3 1444 aa16.59■□□□□ 0.25
ECHDC1-209ENST00000454591 PUS7Q96PZ0 661 aaKnown RBP16.59■□□□□ 0.25
ECHDC1-209ENST00000454591 ADAMTS8Q9UP79 889 aa16.59■□□□□ 0.25
ECHDC1-209ENST00000454591 QRICH2Q9H0J4 1663 aa16.58■□□□□ 0.25
ECHDC1-209ENST00000454591 CFAP70Q5T0N1 1121 aa16.58■□□□□ 0.24
ECHDC1-209ENST00000454591 NPM1P06748 294 aaKnown RBP eCLIP16.57■□□□□ 0.24
ECHDC1-209ENST00000454591 PIAS4Q8N2W9 510 aaPredicted RBP16.57■□□□□ 0.24
ECHDC1-209ENST00000454591 EXOC6Q8TAG9 804 aa16.57■□□□□ 0.24
ECHDC1-209ENST00000454591 CDCA7LQ96GN5 454 aa16.57■□□□□ 0.24
ECHDC1-209ENST00000454591 DIP2CQ9Y2E4 1556 aa16.57■□□□□ 0.24
ECHDC1-209ENST00000454591 TCERG1O14776 1098 aaKnown RBP16.56■□□□□ 0.24
ECHDC1-209ENST00000454591 RICTORQ6R327 1708 aa16.56■□□□□ 0.24
ECHDC1-209ENST00000454591 SIGLEC1Q9BZZ2 1709 aa16.56■□□□□ 0.24
ECHDC1-209ENST00000454591 PLEKHH1Q9ULM0 1364 aa16.56■□□□□ 0.24
ECHDC1-209ENST00000454591 MS4A1P11836 297 aa16.55■□□□□ 0.24
ECHDC1-209ENST00000454591 WDR43Q15061 677 aaKnown RBP eCLIP16.55■□□□□ 0.24
ECHDC1-209ENST00000454591 OSCARQ8IYS5 282 aa16.55■□□□□ 0.24
ECHDC1-209ENST00000454591 TRMT2AQ8IZ69 625 aaKnown RBP16.55■□□□□ 0.24
ECHDC1-209ENST00000454591 C14orf93Q9H972 538 aaKnown RBP16.55■□□□□ 0.24
ECHDC1-209ENST00000454591 POLR3AO14802 1390 aaPredicted RBP16.55■□□□□ 0.24
ECHDC1-209ENST00000454591 ZFYVE9O95405 1425 aa16.54■□□□□ 0.24
ECHDC1-209ENST00000454591 DUSP27Q5VZP5 1158 aa16.54■□□□□ 0.24
ECHDC1-209ENST00000454591 CENPJQ9HC77 1338 aaPredicted RBP16.53■□□□□ 0.24
ECHDC1-209ENST00000454591 NEXMIFQ5QGS0 1516 aa16.52■□□□□ 0.24
ECHDC1-209ENST00000454591 ARHGEF28Q8N1W1 1705 aaKnown RBP16.52■□□□□ 0.24
ECHDC1-209ENST00000454591 SHPRHQ149N8 1683 aa16.52■□□□□ 0.24
ECHDC1-209ENST00000454591 GLI2P10070 1586 aa16.52■□□□□ 0.24
ECHDC1-209ENST00000454591 MYT1LQ9UL68 1186 aa16.51■□□□□ 0.23
ECHDC1-209ENST00000454591 GOLGA2Q08379 1002 aa16.5■□□□□ 0.23
ECHDC1-209ENST00000454591 SLFN5Q08AF3 891 aa16.5■□□□□ 0.23
ECHDC1-209ENST00000454591 CARD14Q9BXL6 1004 aa16.5■□□□□ 0.23
ECHDC1-209ENST00000454591 SENP3-EIF4A1A0A087X0R7 540 aa16.49■□□□□ 0.23
ECHDC1-209ENST00000454591 NCBP3Q53F19 620 aaKnown RBP16.49■□□□□ 0.23
ECHDC1-209ENST00000454591 SALL2Q9Y467 1007 aaPredicted RBP16.48■□□□□ 0.23
ECHDC1-209ENST00000454591 ERICH6Q7L0X2 663 aa16.47■□□□□ 0.23
ECHDC1-209ENST00000454591 NKTRP30414 1462 aaKnown RBP16.46■□□□□ 0.23
ECHDC1-209ENST00000454591 NSD2O96028 1365 aa16.46■□□□□ 0.23
ECHDC1-209ENST00000454591 CFAP65Q6ZU64 1925 aaKnown RBP16.45■□□□□ 0.22
ECHDC1-209ENST00000454591 PLPPR3Q6T4P5 718 aa16.45■□□□□ 0.22
ECHDC1-209ENST00000454591 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.45■□□□□ 0.22
ECHDC1-209ENST00000454591 IPO9Q96P70 1041 aaKnown RBP16.45■□□□□ 0.22
ECHDC1-209ENST00000454591 CRBNQ96SW2 442 aa16.45■□□□□ 0.22
ECHDC1-209ENST00000454591 NOP58Q9Y2X3 529 aaKnown RBP16.45■□□□□ 0.22
ECHDC1-209ENST00000454591 PREX1Q8TCU6 1659 aa16.44■□□□□ 0.22
ECHDC1-209ENST00000454591 KDM2BQ8NHM5 1336 aa16.44■□□□□ 0.22
ECHDC1-209ENST00000454591 TULP4Q9NRJ4 1543 aa16.44■□□□□ 0.22
ECHDC1-209ENST00000454591 REREQ9P2R6 1566 aa16.44■□□□□ 0.22
ECHDC1-209ENST00000454591 CLTCQ00610 1675 aaKnown RBP16.44■□□□□ 0.22
ECHDC1-209ENST00000454591 ANP32AP39687 249 aaKnown RBP16.44■□□□□ 0.22
ECHDC1-209ENST00000454591 NINLQ9Y2I6 1382 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms