RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 CHGAP10645 457 aaKnown RBP15.15■□□□□ 0.02
PKP4-206ENST00000452162 L3MBTL2Q969R5 705 aa15.14■□□□□ 0.01
PKP4-206ENST00000452162 HIRIP3Q9BW71 556 aaPredicted RBP15.14■□□□□ 0.01
PKP4-206ENST00000452162 PELP1Q8IZL8 1130 aaKnown RBP15.13■□□□□ 0.01
PKP4-206ENST00000452162 DDX10Q13206 875 aaKnown RBP15.13■□□□□ 0.01
PKP4-206ENST00000452162 KIF1BO60333 1816 aa15.13■□□□□ 0.01
PKP4-206ENST00000452162 SLIT1O75093 1534 aa15.13■□□□□ 0.01
PKP4-206ENST00000452162 ARHGAP23Q9P227 1491 aa15.12■□□□□ 0.01
PKP4-206ENST00000452162 TMEM2Q9UHN6 1383 aa15.12■□□□□ 0.01
PKP4-206ENST00000452162 ANKLE2Q86XL3 938 aa15.12■□□□□ 0.01
PKP4-206ENST00000452162 NEURL4Q96JN8 1562 aa15.12■□□□□ 0.01
PKP4-206ENST00000452162 LTKP29376 864 aa15.12■□□□□ 0.01
PKP4-206ENST00000452162 TXNDC2Q86VQ3 553 aa15.1■□□□□ 0.01
PKP4-206ENST00000452162 SCAF11Q99590 1463 aaKnown RBP15.09■□□□□ 0.01
PKP4-206ENST00000452162 DMRT2Q9Y5R5 561 aa15.09■□□□□ 0.01
PKP4-206ENST00000452162 CCDC144AA2RUR9 1427 aa15.08■□□□□ 0.01
PKP4-206ENST00000452162 ZFYVE9O95405 1425 aa15.08■□□□□ 0
PKP4-206ENST00000452162 EID1Q9Y6B2 187 aa15.07■□□□□ 0
PKP4-206ENST00000452162 RIMS2Q9UQ26 1411 aa15.07■□□□□ 0
PKP4-206ENST00000452162 NUTM2DQ5VT03 806 aaPredicted RBP15.07■□□□□ 0
PKP4-206ENST00000452162 MED14O60244 1454 aa15.07■□□□□ 0
PKP4-206ENST00000452162 NPHP4O75161 1426 aaPredicted RBP15.06■□□□□ 0
PKP4-206ENST00000452162 IQGAP1P46940 1657 aa15.06■□□□□ 0
PKP4-206ENST00000452162 HSPA5P11021 654 aaKnown RBP15.06■□□□□ 0
PKP4-206ENST00000452162 NBPF8Q3BBV2 869 aa15.06■□□□□ 0
PKP4-206ENST00000452162 ZNF326Q5BKZ1 582 aaKnown RBP15.06■□□□□ 0
PKP4-206ENST00000452162 SENP3Q9H4L4 574 aaPredicted RBP15.05■□□□□ 0
PKP4-206ENST00000452162 GTF3C3Q9Y5Q9 886 aa15.05■□□□□ 0
PKP4-206ENST00000452162 EIF4G2P78344 907 aaKnown RBP eCLIP15.03■□□□□ -0
PKP4-206ENST00000452162 SPATA31E1Q6ZUB1 1445 aa15.02■□□□□ -0
PKP4-206ENST00000452162 NEXMIFQ5QGS0 1516 aa15.02■□□□□ -0
PKP4-206ENST00000452162 RGL3Q3MIN7 710 aa15.02■□□□□ -0
PKP4-206ENST00000452162 HDGFP51858 240 aaKnown RBP15.02□□□□□ -0.01
PKP4-206ENST00000452162 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.01□□□□□ -0.01
PKP4-206ENST00000452162 PPLO60437 1756 aa15□□□□□ -0.01
PKP4-206ENST00000452162 WASHC2AQ641Q2 1341 aa15□□□□□ -0.01
PKP4-206ENST00000452162 PLEKHG1Q9ULL1 1385 aa14.99□□□□□ -0.01
PKP4-206ENST00000452162 ZNF335Q9H4Z2 1342 aaPredicted RBP14.99□□□□□ -0.01
PKP4-206ENST00000452162 BCANQ96GW7 911 aa14.99□□□□□ -0.01
PKP4-206ENST00000452162 SLC26A8Q96RN1 970 aa14.99□□□□□ -0.01
PKP4-206ENST00000452162 IFT172Q9UG01 1749 aa14.98□□□□□ -0.01
PKP4-206ENST00000452162 CCER2I3L3R5 266 aa14.97□□□□□ -0.01
PKP4-206ENST00000452162 RPGRIP1LQ68CZ1 1315 aa14.97□□□□□ -0.01
PKP4-206ENST00000452162 ANP32CO43423 234 aa14.97□□□□□ -0.01
PKP4-206ENST00000452162 STRCP1A6NGW2 1772 aa14.96□□□□□ -0.01
PKP4-206ENST00000452162 LTBP4Q8N2S1 1624 aa14.96□□□□□ -0.02
PKP4-206ENST00000452162 NRXN3Q9Y4C0 1643 aa14.96□□□□□ -0.02
PKP4-206ENST00000452162 ADAMTS13Q76LX8 1427 aa14.95□□□□□ -0.02
PKP4-206ENST00000452162 VGFO15240 615 aaPredicted RBP14.94□□□□□ -0.02
PKP4-206ENST00000452162 CCDC7Q96M83 1385 aa14.94□□□□□ -0.02
PKP4-206ENST00000452162 RALGAPBQ86X10 1494 aa14.93□□□□□ -0.02
PKP4-206ENST00000452162 SETBP1Q9Y6X0 1596 aa14.93□□□□□ -0.02
PKP4-206ENST00000452162 ADGRF5Q8IZF2 1346 aa14.93□□□□□ -0.02
PKP4-206ENST00000452162 C11orf95C9JLR9 678 aaPredicted RBP14.92□□□□□ -0.02
PKP4-206ENST00000452162 MYT1Q01538 1121 aa14.92□□□□□ -0.02
PKP4-206ENST00000452162 TBX22Q9Y458 520 aa14.92□□□□□ -0.02
PKP4-206ENST00000452162 CHD2O14647 1828 aaKnown RBP14.91□□□□□ -0.02
PKP4-206ENST00000452162 DIP2AQ14689 1571 aa14.9□□□□□ -0.02
PKP4-206ENST00000452162 SETD1AO15047 1707 aaKnown RBP14.89□□□□□ -0.03
PKP4-206ENST00000452162 CERKQ8TCT0 537 aa14.89□□□□□ -0.03
PKP4-206ENST00000452162 DCAF11Q8TEB1 546 aa14.89□□□□□ -0.03
PKP4-206ENST00000452162 KDM2AQ9Y2K7 1162 aa14.89□□□□□ -0.03
PKP4-206ENST00000452162 USP47Q96K76 1375 aa14.88□□□□□ -0.03
PKP4-206ENST00000452162 ALKQ9UM73 1620 aa14.88□□□□□ -0.03
PKP4-206ENST00000452162 KCNA6P17658 529 aa14.88□□□□□ -0.03
PKP4-206ENST00000452162 CPS1P31327 1500 aa14.87□□□□□ -0.03
PKP4-206ENST00000452162 METP08581 1390 aa14.87□□□□□ -0.03
PKP4-206ENST00000452162 MYOM2P54296 1465 aa14.87□□□□□ -0.03
PKP4-206ENST00000452162 KIF7Q2M1P5 1343 aa14.87□□□□□ -0.03
PKP4-206ENST00000452162 PIK3C2GO75747 1445 aa14.87□□□□□ -0.03
PKP4-206ENST00000452162 PTPRUQ92729 1446 aa14.87□□□□□ -0.03
PKP4-206ENST00000452162 NRXN1Q9ULB1 1477 aa14.86□□□□□ -0.03
PKP4-206ENST00000452162 NWD1Q149M9 1564 aa14.86□□□□□ -0.03
PKP4-206ENST00000452162 PIK3R4Q99570 1358 aa14.85□□□□□ -0.03
PKP4-206ENST00000452162 XIRP1Q702N8 1843 aaKnown RBP14.84□□□□□ -0.03
PKP4-206ENST00000452162 LRRC7Q96NW7 1537 aa14.84□□□□□ -0.03
PKP4-206ENST00000452162 TRPM1Q7Z4N2 1603 aa14.84□□□□□ -0.03
PKP4-206ENST00000452162 RBM33Q96EV2 1170 aaKnown RBP14.83□□□□□ -0.03
PKP4-206ENST00000452162 AMOTL2Q9Y2J4 779 aa14.83□□□□□ -0.03
PKP4-206ENST00000452162 PRAG1Q86YV5 1406 aa14.83□□□□□ -0.03
PKP4-206ENST00000452162 XRN1Q8IZH2 1706 aaKnown RBP14.82□□□□□ -0.04
PKP4-206ENST00000452162 CFAP70Q5T0N1 1121 aa14.82□□□□□ -0.04
PKP4-206ENST00000452162 NKTRP30414 1462 aaKnown RBP14.82□□□□□ -0.04
PKP4-206ENST00000452162 PROSER2Q86WR7 435 aaPredicted RBP14.82□□□□□ -0.04
PKP4-206ENST00000452162 C14orf93Q9H972 538 aaKnown RBP14.82□□□□□ -0.04
PKP4-206ENST00000452162 ASXL1Q8IXJ9 1541 aa14.81□□□□□ -0.04
PKP4-206ENST00000452162 TMEM132EQ6IEE7 984 aa14.81□□□□□ -0.04
PKP4-206ENST00000452162 STAC3Q96MF2 364 aa14.81□□□□□ -0.04
PKP4-206ENST00000452162 TMEM94Q12767 1356 aa14.8□□□□□ -0.04
PKP4-206ENST00000452162 CARD11Q9BXL7 1154 aa14.8□□□□□ -0.04
PKP4-206ENST00000452162 IQSEC2Q5JU85 1478 aa14.79□□□□□ -0.04
PKP4-206ENST00000452162 LAMC1P11047 1609 aa14.79□□□□□ -0.04
PKP4-206ENST00000452162 GPRASP1Q5JY77 1395 aa14.77□□□□□ -0.04
PKP4-206ENST00000452162 ROCK2O75116 1388 aaKnown RBP14.77□□□□□ -0.05
PKP4-206ENST00000452162 PRKRIP1Q9H875 184 aaPredicted RBP14.77□□□□□ -0.05
PKP4-206ENST00000452162 STK26Q9P289 416 aa14.77□□□□□ -0.05
PKP4-206ENST00000452162 ROBO2Q9HCK4 1378 aa14.75□□□□□ -0.05
PKP4-206ENST00000452162 ADGRB1O14514 1584 aa14.75□□□□□ -0.05
PKP4-206ENST00000452162 YTHDC2Q9H6S0 1430 aaKnown RBP14.75□□□□□ -0.05
PKP4-206ENST00000452162 LRPPRCP42704 1394 aaKnown RBP14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms