RNA–Protein interactions for RNA: ENST00000451586.1

TPR-202, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 2

Gene TPR, Length 515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-202ENST00000451586 NUTM2DQ5VT03 806 aaPredicted RBP35.72■■■■□ 3.31
TPR-202ENST00000451586 ZFYVE9O95405 1425 aa35.72■■■■□ 3.31
TPR-202ENST00000451586 HDGFP51858 240 aaKnown RBP35.71■■■■□ 3.31
TPR-202ENST00000451586 NPHP4O75161 1426 aaPredicted RBP35.71■■■■□ 3.31
TPR-202ENST00000451586 MED14O60244 1454 aa35.71■■■■□ 3.31
TPR-202ENST00000451586 DHX57Q6P158 1386 aaKnown RBP35.67■■■■□ 3.3
TPR-202ENST00000451586 ABCF1Q8NE71 845 aaKnown RBP eCLIP35.67■■■■□ 3.3
TPR-202ENST00000451586 PPP1R15AO75807 674 aaPredicted RBP35.66■■■■□ 3.3
TPR-202ENST00000451586 RGL3Q3MIN7 710 aa35.65■■■■□ 3.3
TPR-202ENST00000451586 SENP3Q9H4L4 574 aaPredicted RBP35.64■■■■□ 3.3
TPR-202ENST00000451586 IQGAP1P46940 1657 aa35.63■■■■□ 3.29
TPR-202ENST00000451586 SPATA31E1Q6ZUB1 1445 aa35.63■■■■□ 3.29
TPR-202ENST00000451586 BCANQ96GW7 911 aa35.6■■■■□ 3.29
TPR-202ENST00000451586 RPGRIP1LQ68CZ1 1315 aa35.58■■■■□ 3.29
TPR-202ENST00000451586 NEXMIFQ5QGS0 1516 aa35.58■■■■□ 3.29
TPR-202ENST00000451586 PLEKHG1Q9ULL1 1385 aa35.56■■■■□ 3.28
TPR-202ENST00000451586 SLC26A8Q96RN1 970 aa35.53■■■■□ 3.28
TPR-202ENST00000451586 VGFO15240 615 aaPredicted RBP35.5■■■■□ 3.27
TPR-202ENST00000451586 ZNF335Q9H4Z2 1342 aaPredicted RBP35.5■■■■□ 3.27
TPR-202ENST00000451586 PPLO60437 1756 aa35.49■■■■□ 3.27
TPR-202ENST00000451586 SIN3AQ96ST3 1273 aa35.48■■■■□ 3.27
TPR-202ENST00000451586 ADAMTS13Q76LX8 1427 aa35.43■■■■□ 3.26
TPR-202ENST00000451586 TBX22Q9Y458 520 aa35.42■■■■□ 3.26
TPR-202ENST00000451586 IFT172Q9UG01 1749 aa35.41■■■■□ 3.26
TPR-202ENST00000451586 ADGRF5Q8IZF2 1346 aa35.41■■■■□ 3.26
TPR-202ENST00000451586 NEUROD1Q13562 356 aa35.41■■■■□ 3.26
TPR-202ENST00000451586 LTBP4Q8N2S1 1624 aa35.39■■■■□ 3.26
TPR-202ENST00000451586 SETBP1Q9Y6X0 1596 aa35.38■■■■□ 3.25
TPR-202ENST00000451586 NRXN3Q9Y4C0 1643 aa35.37■■■■□ 3.25
TPR-202ENST00000451586 DCAF11Q8TEB1 546 aa35.36■■■■□ 3.25
TPR-202ENST00000451586 KDM2AQ9Y2K7 1162 aa35.35■■■■□ 3.25
TPR-202ENST00000451586 STRCP1A6NGW2 1772 aa35.32■■■■□ 3.24
TPR-202ENST00000451586 DIP2AQ14689 1571 aa35.31■■■■□ 3.24
TPR-202ENST00000451586 KCNA6P17658 529 aa35.31■■■■□ 3.24
TPR-202ENST00000451586 CERKQ8TCT0 537 aa35.29■■■■□ 3.24
TPR-202ENST00000451586 MYOM2P54296 1465 aa35.29■■■■□ 3.24
TPR-202ENST00000451586 METP08581 1390 aa35.26■■■■□ 3.24
TPR-202ENST00000451586 ALKQ9UM73 1620 aa35.26■■■■□ 3.24
TPR-202ENST00000451586 STAC3Q96MF2 364 aa35.25■■■■□ 3.23
TPR-202ENST00000451586 CHD2O14647 1828 aaKnown RBP35.25■■■■□ 3.23
TPR-202ENST00000451586 PIK3R4Q99570 1358 aa35.25■■■■□ 3.23
TPR-202ENST00000451586 PIK3C2GO75747 1445 aa35.24■■■■□ 3.23
TPR-202ENST00000451586 NRXN1Q9ULB1 1477 aa35.24■■■■□ 3.23
TPR-202ENST00000451586 CPS1P31327 1500 aa35.24■■■■□ 3.23
TPR-202ENST00000451586 L3MBTL2Q969R5 705 aa35.24■■■■□ 3.23
TPR-202ENST00000451586 PTPRUQ92729 1446 aa35.22■■■■□ 3.23
TPR-202ENST00000451586 SETD1AO15047 1707 aaKnown RBP35.2■■■■□ 3.23
TPR-202ENST00000451586 AMOTL2Q9Y2J4 779 aa35.2■■■■□ 3.23
TPR-202ENST00000451586 NWD1Q149M9 1564 aa35.19■■■■□ 3.22
TPR-202ENST00000451586 CCER1Q8TC90 406 aaPredicted RBP35.19■■■■□ 3.22
TPR-202ENST00000451586 C14orf93Q9H972 538 aaKnown RBP35.19■■■■□ 3.22
TPR-202ENST00000451586 CFAP70Q5T0N1 1121 aa35.18■■■■□ 3.22
TPR-202ENST00000451586 LRRC7Q96NW7 1537 aa35.16■■■■□ 3.22
TPR-202ENST00000451586 PROSER2Q86WR7 435 aaPredicted RBP35.16■■■■□ 3.22
TPR-202ENST00000451586 TMEM132EQ6IEE7 984 aa35.14■■■■□ 3.22
TPR-202ENST00000451586 CLSPNQ9HAW4 1339 aa35.13■■■■□ 3.21
TPR-202ENST00000451586 RBM33Q96EV2 1170 aaKnown RBP35.13■■■■□ 3.21
TPR-202ENST00000451586 NKTRP30414 1462 aaKnown RBP35.11■■■■□ 3.21
TPR-202ENST00000451586 TONSLQ96HA7 1378 aa35.1■■■■□ 3.21
TPR-202ENST00000451586 XRN1Q8IZH2 1706 aaKnown RBP35.08■■■■□ 3.21
TPR-202ENST00000451586 TMEM94Q12767 1356 aa35.07■■■■□ 3.2
TPR-202ENST00000451586 ASXL1Q8IXJ9 1541 aa35.06■■■■□ 3.2
TPR-202ENST00000451586 IQSEC2Q5JU85 1478 aa35.05■■■■□ 3.2
TPR-202ENST00000451586 STK26Q9P289 416 aa35.05■■■■□ 3.2
TPR-202ENST00000451586 LAMC1P11047 1609 aa35.05■■■■□ 3.2
TPR-202ENST00000451586 PRAG1Q86YV5 1406 aa35.05■■■■□ 3.2
TPR-202ENST00000451586 XIRP1Q702N8 1843 aaKnown RBP35.04■■■■□ 3.2
TPR-202ENST00000451586 LRPPRCP42704 1394 aaKnown RBP35.01■■■■□ 3.2
TPR-202ENST00000451586 YTHDC2Q9H6S0 1430 aaKnown RBP34.99■■■■□ 3.19
TPR-202ENST00000451586 ROBO2Q9HCK4 1378 aa34.98■■■■□ 3.19
TPR-202ENST00000451586 ABCC11Q96J66 1382 aa34.97■■■■□ 3.19
TPR-202ENST00000451586 ADGRB1O14514 1584 aa34.96■■■■□ 3.19
TPR-202ENST00000451586 NBPF1Q3BBV0 1214 aa34.95■■■■□ 3.19
TPR-202ENST00000451586 NBPF8Q3BBV2 869 aa34.94■■■■□ 3.18
TPR-202ENST00000451586 C14orf37Q86TY3 774 aa34.94■■■■□ 3.18
TPR-202ENST00000451586 PTCH1Q13635 1447 aa34.93■■■■□ 3.18
TPR-202ENST00000451586 KIAA1210Q9ULL0 1709 aa34.92■■■■□ 3.18
TPR-202ENST00000451586 UBAP1LF5GYI3 381 aa34.92■■■■□ 3.18
TPR-202ENST00000451586 TECPR2O15040 1411 aa34.91■■■■□ 3.18
TPR-202ENST00000451586 NCOA3Q9Y6Q9 1424 aa34.91■■■■□ 3.18
TPR-202ENST00000451586 WAPLQ7Z5K2 1190 aa34.89■■■■□ 3.18
TPR-202ENST00000451586 FBXO41Q8TF61 875 aa34.89■■■■□ 3.18
TPR-202ENST00000451586 TRAK1Q9UPV9 953 aa34.88■■■■□ 3.17
TPR-202ENST00000451586 KNDC1Q76NI1 1749 aa34.88■■■■□ 3.17
TPR-202ENST00000451586 MSH6P52701 1360 aa34.87■■■■□ 3.17
TPR-202ENST00000451586 TIMELESSQ9UNS1 1208 aa34.87■■■■□ 3.17
TPR-202ENST00000451586 TOM1O60784 492 aa34.86■■■■□ 3.17
TPR-202ENST00000451586 SIRT1Q96EB6 747 aa34.86■■■■□ 3.17
TPR-202ENST00000451586 C19orf44Q9H6X5 657 aa34.86■■■■□ 3.17
TPR-202ENST00000451586 PLEKHH1Q9ULM0 1364 aa34.85■■■■□ 3.17
TPR-202ENST00000451586 TRPM1Q7Z4N2 1603 aa34.84■■■■□ 3.17
TPR-202ENST00000451586 PRAM1Q96QH2 718 aa34.81■■■■□ 3.16
TPR-202ENST00000451586 FAM135BQ49AJ0 1406 aa34.81■■■■□ 3.16
TPR-202ENST00000451586 SIPA1L2Q9P2F8 1722 aaPredicted RBP34.79■■■■□ 3.16
TPR-202ENST00000451586 DLC1Q96QB1 1528 aa34.79■■■■□ 3.16
TPR-202ENST00000451586 ADGRL3Q9HAR2 1447 aa34.79■■■■□ 3.16
TPR-202ENST00000451586 POGKQ9P215 609 aa34.78■■■■□ 3.16
TPR-202ENST00000451586 ROCK2O75116 1388 aaKnown RBP34.77■■■■□ 3.16
TPR-202ENST00000451586 ATF3P18847 181 aa34.77■■■■□ 3.16
TPR-202ENST00000451586 PIP4K2BP78356 416 aa34.77■■■■□ 3.16
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms