RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 DDX12PQ92771 950 aa5.47□□□□□ -1.53
HMGB3P8-201ENST00000449709 RBM33Q96EV2 1170 aaKnown RBP5.47□□□□□ -1.53
HMGB3P8-201ENST00000449709 ARID3AQ99856 593 aa5.47□□□□□ -1.53
HMGB3P8-201ENST00000449709 PRIM1P49642 420 aaKnown RBP5.46□□□□□ -1.54
HMGB3P8-201ENST00000449709 PTGDRQ13258 359 aa5.46□□□□□ -1.54
HMGB3P8-201ENST00000449709 EPAS1Q99814 870 aa5.46□□□□□ -1.54
HMGB3P8-201ENST00000449709 KIAA1468Q9P260 1216 aa5.46□□□□□ -1.54
HMGB3P8-201ENST00000449709 A6NJR5 290 aa5.45□□□□□ -1.54
HMGB3P8-201ENST00000449709 ARID3CA6NKF2 412 aa5.45□□□□□ -1.54
HMGB3P8-201ENST00000449709 APBB1O00213 710 aa5.45□□□□□ -1.54
HMGB3P8-201ENST00000449709 MS4A1P11836 297 aa5.45□□□□□ -1.54
HMGB3P8-201ENST00000449709 BCAMP50895 628 aa5.45□□□□□ -1.54
HMGB3P8-201ENST00000449709 EIF5BO60841 1220 aaKnown RBP5.44□□□□□ -1.54
HMGB3P8-201ENST00000449709 TTLL12Q14166 644 aaPredicted RBP5.44□□□□□ -1.54
HMGB3P8-201ENST00000449709 GIGYF2Q6Y7W6 1299 aaKnown RBP5.44□□□□□ -1.54
HMGB3P8-201ENST00000449709 ANKK1Q8NFD2 765 aa5.44□□□□□ -1.54
HMGB3P8-201ENST00000449709 PCMTD1Q96MG8 357 aaPredicted RBP5.44□□□□□ -1.54
HMGB3P8-201ENST00000449709 REPIN1Q9BWE0 567 aaKnown RBP5.44□□□□□ -1.54
HMGB3P8-201ENST00000449709 SEPT9Q9UHD8 586 aaPredicted RBP5.44□□□□□ -1.54
HMGB3P8-201ENST00000449709 TRIM6-TRIM34B2RNG4 842 aa5.43□□□□□ -1.54
HMGB3P8-201ENST00000449709 TSR1Q2NL82 804 aaKnown RBP5.43□□□□□ -1.54
HMGB3P8-201ENST00000449709 TMUB1Q9BVT8 246 aa5.43□□□□□ -1.54
HMGB3P8-201ENST00000449709 PCGF6Q9BYE7 350 aa5.43□□□□□ -1.54
HMGB3P8-201ENST00000449709 TRAK2O60296 914 aa5.42□□□□□ -1.54
HMGB3P8-201ENST00000449709 EN1Q05925 392 aaPredicted RBP5.42□□□□□ -1.54
HMGB3P8-201ENST00000449709 SH3D19Q5HYK7 790 aa5.42□□□□□ -1.54
HMGB3P8-201ENST00000449709 LAPTM4BQ86VI4 370 aa5.42□□□□□ -1.54
HMGB3P8-201ENST00000449709 ZFRQ96KR1 1074 aaKnown RBP5.42□□□□□ -1.54
HMGB3P8-201ENST00000449709 CLSPNQ9HAW4 1339 aa5.42□□□□□ -1.54
HMGB3P8-201ENST00000449709 SOWAHBA6NEL2 793 aa5.41□□□□□ -1.54
HMGB3P8-201ENST00000449709 MAP3K7O43318 606 aa5.41□□□□□ -1.54
HMGB3P8-201ENST00000449709 IFFO2Q5TF58 517 aa5.41□□□□□ -1.54
HMGB3P8-201ENST00000449709 CLUAP1Q96AJ1 413 aa5.41□□□□□ -1.54
HMGB3P8-201ENST00000449709 NPDC1Q9NQX5 325 aaPredicted RBP5.41□□□□□ -1.54
HMGB3P8-201ENST00000449709 A0A0G2JS52 829 aa5.4□□□□□ -1.54
HMGB3P8-201ENST00000449709 WBP1LQ9NX94 342 aa5.4□□□□□ -1.54
HMGB3P8-201ENST00000449709 TSKSQ9UJT2 592 aa5.4□□□□□ -1.54
HMGB3P8-201ENST00000449709 CLCN1P35523 988 aa5.39□□□□□ -1.55
HMGB3P8-201ENST00000449709 MCM6Q14566 821 aa5.39□□□□□ -1.55
HMGB3P8-201ENST00000449709 FAM98CQ17RN3 349 aaKnown RBP5.39□□□□□ -1.55
HMGB3P8-201ENST00000449709 SKIV2LQ15477 1246 aaKnown RBP5.38□□□□□ -1.55
HMGB3P8-201ENST00000449709 CCDC82Q8N4S0 544 aa5.38□□□□□ -1.55
HMGB3P8-201ENST00000449709 PHOX2BQ99453 314 aa5.38□□□□□ -1.55
HMGB3P8-201ENST00000449709 CDHR5Q9HBB8 845 aa5.38□□□□□ -1.55
HMGB3P8-201ENST00000449709 GPCPD1Q9NPB8 672 aa5.38□□□□□ -1.55
HMGB3P8-201ENST00000449709 SMAPO00193 183 aa5.37□□□□□ -1.55
HMGB3P8-201ENST00000449709 ITGBL1O95965 494 aaPredicted RBP5.37□□□□□ -1.55
HMGB3P8-201ENST00000449709 SSTR3P32745 418 aaPredicted RBP5.37□□□□□ -1.55
HMGB3P8-201ENST00000449709 PACS2Q86VP3 889 aa5.37□□□□□ -1.55
HMGB3P8-201ENST00000449709 CDCA7LQ96GN5 454 aa5.37□□□□□ -1.55
HMGB3P8-201ENST00000449709 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.37□□□□□ -1.55
HMGB3P8-201ENST00000449709 FAM198AQ9UFP1 575 aa5.37□□□□□ -1.55
HMGB3P8-201ENST00000449709 HPS5Q9UPZ3 1129 aa5.37□□□□□ -1.55
HMGB3P8-201ENST00000449709 C3orf80F5H4A9 247 aa5.36□□□□□ -1.55
HMGB3P8-201ENST00000449709 PRSS12P56730 875 aa5.36□□□□□ -1.55
HMGB3P8-201ENST00000449709 MDM2Q00987 491 aaPredicted RBP5.36□□□□□ -1.55
HMGB3P8-201ENST00000449709 FNBP4Q8N3X1 1017 aaPredicted RBP5.36□□□□□ -1.55
HMGB3P8-201ENST00000449709 LRCH3Q96II8 777 aa5.36□□□□□ -1.55
HMGB3P8-201ENST00000449709 TSR3Q9UJK0 312 aaKnown RBP5.36□□□□□ -1.55
HMGB3P8-201ENST00000449709 RGS20O76081 388 aa5.35□□□□□ -1.55
HMGB3P8-201ENST00000449709 PDIA4P13667 645 aaKnown RBP5.35□□□□□ -1.55
HMGB3P8-201ENST00000449709 ERICH6BQ5W0A0 696 aa5.35□□□□□ -1.55
HMGB3P8-201ENST00000449709 PROCA1Q8NCQ7 364 aaPredicted RBP5.35□□□□□ -1.55
HMGB3P8-201ENST00000449709 RANGAP1P46060 587 aaPredicted RBP5.34□□□□□ -1.55
HMGB3P8-201ENST00000449709 NYAP1Q6ZVC0 841 aa5.34□□□□□ -1.55
HMGB3P8-201ENST00000449709 PROSER2Q86WR7 435 aaPredicted RBP5.34□□□□□ -1.55
HMGB3P8-201ENST00000449709 POM121Q96HA1 1249 aa5.34□□□□□ -1.55
HMGB3P8-201ENST00000449709 BEGAINQ9BUH8 593 aa5.34□□□□□ -1.55
HMGB3P8-201ENST00000449709 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.34□□□□□ -1.55
HMGB3P8-201ENST00000449709 FAM217BQ9NTX9 383 aaPredicted RBP5.34□□□□□ -1.55
HMGB3P8-201ENST00000449709 ZNF777Q9ULD5 760 aaPredicted RBP5.34□□□□□ -1.55
HMGB3P8-201ENST00000449709 KCNC4Q03721 635 aa5.33□□□□□ -1.56
HMGB3P8-201ENST00000449709 SAMD7Q7Z3H4 446 aa5.33□□□□□ -1.56
HMGB3P8-201ENST00000449709 TATDN2Q93075 761 aa5.33□□□□□ -1.56
HMGB3P8-201ENST00000449709 IRX2Q9BZI1 471 aaPredicted RBP5.33□□□□□ -1.56
HMGB3P8-201ENST00000449709 PPP4CP60510 307 aa5.32□□□□□ -1.56
HMGB3P8-201ENST00000449709 METTL3Q86U44 580 aaKnown RBP5.32□□□□□ -1.56
HMGB3P8-201ENST00000449709 CERKQ8TCT0 537 aa5.32□□□□□ -1.56
HMGB3P8-201ENST00000449709 NECTIN2Q92692 538 aa5.32□□□□□ -1.56
HMGB3P8-201ENST00000449709 POLR3EQ9NVU0 708 aa5.32□□□□□ -1.56
HMGB3P8-201ENST00000449709 PNMA3Q9UL41 463 aa5.32□□□□□ -1.56
HMGB3P8-201ENST00000449709 ZBTB7CA1YPR0 619 aa5.31□□□□□ -1.56
HMGB3P8-201ENST00000449709 NBPF26B4DH59 902 aa5.31□□□□□ -1.56
HMGB3P8-201ENST00000449709 RAD21O60216 631 aa5.31□□□□□ -1.56
HMGB3P8-201ENST00000449709 OATP04181 439 aa5.31□□□□□ -1.56
HMGB3P8-201ENST00000449709 MYSM1Q5VVJ2 828 aa5.31□□□□□ -1.56
HMGB3P8-201ENST00000449709 NUDT18Q6ZVK8 323 aa5.31□□□□□ -1.56
HMGB3P8-201ENST00000449709 SERPINA10Q9UK55 444 aa5.31□□□□□ -1.56
HMGB3P8-201ENST00000449709 SPDYE5A6NIY4 337 aa5.3□□□□□ -1.56
HMGB3P8-201ENST00000449709 FAM161AQ3B820 660 aa5.3□□□□□ -1.56
HMGB3P8-201ENST00000449709 PADI6Q6TGC4 694 aa5.3□□□□□ -1.56
HMGB3P8-201ENST00000449709 NPM2Q86SE8 214 aaKnown RBP5.3□□□□□ -1.56
HMGB3P8-201ENST00000449709 BANK1Q8NDB2 785 aa5.3□□□□□ -1.56
HMGB3P8-201ENST00000449709 PXYLP1Q8TE99 480 aa5.3□□□□□ -1.56
HMGB3P8-201ENST00000449709 COG6Q9Y2V7 657 aa5.3□□□□□ -1.56
HMGB3P8-201ENST00000449709 ADGRG1Q9Y653 693 aa5.3□□□□□ -1.56
HMGB3P8-201ENST00000449709 RNF40O75150 1001 aa5.29□□□□□ -1.56
HMGB3P8-201ENST00000449709 CLK2P49760 499 aaKnown RBP5.29□□□□□ -1.56
HMGB3P8-201ENST00000449709 TJAP1Q5JTD0 557 aa5.29□□□□□ -1.56
HMGB3P8-201ENST00000449709 TTC13Q8NBP0 860 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms