RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 CNTLNQ9NXG0 1405 aa5.87□□□□□ -1.47
PMS1-215ENST00000447232 MROH2AA6NES4 1674 aa5.87□□□□□ -1.47
PMS1-215ENST00000447232 KDM5CP41229 1560 aa5.87□□□□□ -1.47
PMS1-215ENST00000447232 MS4A4AQ96JQ5 239 aa5.87□□□□□ -1.47
PMS1-215ENST00000447232 MYO3AQ8NEV4 1616 aa5.87□□□□□ -1.47
PMS1-215ENST00000447232 CEP170BQ9Y4F5 1589 aaPredicted RBP5.86□□□□□ -1.47
PMS1-215ENST00000447232 NUP153P49790 1475 aaKnown RBP5.86□□□□□ -1.47
PMS1-215ENST00000447232 SUPT6HQ7KZ85 1726 aaKnown RBP5.86□□□□□ -1.47
PMS1-215ENST00000447232 BCL11BQ9C0K0 894 aaPredicted RBP5.86□□□□□ -1.47
PMS1-215ENST00000447232 PHF8Q9UPP1 1060 aa5.86□□□□□ -1.47
PMS1-215ENST00000447232 G3V3G9 751 aa5.86□□□□□ -1.47
PMS1-215ENST00000447232 RGL2O15211 777 aa5.86□□□□□ -1.47
PMS1-215ENST00000447232 TAOK2Q9UL54 1235 aa5.85□□□□□ -1.47
PMS1-215ENST00000447232 VWDEQ8N2E2 1590 aa5.85□□□□□ -1.47
PMS1-215ENST00000447232 NEURL4Q96JN8 1562 aa5.85□□□□□ -1.47
PMS1-215ENST00000447232 PLCH2O75038 1416 aa5.85□□□□□ -1.47
PMS1-215ENST00000447232 ABCA6Q8N139 1617 aa5.85□□□□□ -1.47
PMS1-215ENST00000447232 ZNF518AQ6AHZ1 1483 aa5.85□□□□□ -1.47
PMS1-215ENST00000447232 CDAN1Q8IWY9 1227 aa5.84□□□□□ -1.47
PMS1-215ENST00000447232 STK24Q9Y6E0 443 aa5.84□□□□□ -1.47
PMS1-215ENST00000447232 RNF17Q9BXT8 1623 aaKnown RBP5.84□□□□□ -1.48
PMS1-215ENST00000447232 POLR1AO95602 1720 aaPredicted RBP5.83□□□□□ -1.48
PMS1-215ENST00000447232 STK25O00506 426 aa5.83□□□□□ -1.48
PMS1-215ENST00000447232 MICALL2Q8IY33 904 aa5.83□□□□□ -1.48
PMS1-215ENST00000447232 ESF1Q9H501 851 aaKnown RBP5.83□□□□□ -1.48
PMS1-215ENST00000447232 PLEKHD1A6NEE1 506 aa5.83□□□□□ -1.48
PMS1-215ENST00000447232 FAM9AQ8IZU1 332 aaPredicted RBP5.83□□□□□ -1.48
PMS1-215ENST00000447232 FBXO22Q8NEZ5 403 aa5.83□□□□□ -1.48
PMS1-215ENST00000447232 MARVELD3Q96A59 401 aa5.83□□□□□ -1.48
PMS1-215ENST00000447232 ZMYM3Q14202 1370 aa5.83□□□□□ -1.48
PMS1-215ENST00000447232 MLH3Q9UHC1 1453 aa5.82□□□□□ -1.48
PMS1-215ENST00000447232 SAMD9Q5K651 1589 aa5.82□□□□□ -1.48
PMS1-215ENST00000447232 DNMT1P26358 1616 aaKnown RBP5.82□□□□□ -1.48
PMS1-215ENST00000447232 HOXB3P14651 431 aaPredicted RBP5.81□□□□□ -1.48
PMS1-215ENST00000447232 NLRP6P59044 892 aa5.81□□□□□ -1.48
PMS1-215ENST00000447232 TMEM92Q6UXU6 159 aa5.81□□□□□ -1.48
PMS1-215ENST00000447232 MFRPQ9BY79 579 aa5.81□□□□□ -1.48
PMS1-215ENST00000447232 LRRC7Q96NW7 1537 aa5.81□□□□□ -1.48
PMS1-215ENST00000447232 STRCP1A6NGW2 1772 aa5.81□□□□□ -1.48
PMS1-215ENST00000447232 AFAP1Q8N556 730 aa5.81□□□□□ -1.48
PMS1-215ENST00000447232 SYNMO15061 1565 aa5.8□□□□□ -1.48
PMS1-215ENST00000447232 A2ML1A8K2U0 1454 aa5.8□□□□□ -1.48
PMS1-215ENST00000447232 P3H3Q8IVL6 736 aa5.8□□□□□ -1.48
PMS1-215ENST00000447232 MYO5CQ9NQX4 1742 aa5.79□□□□□ -1.48
PMS1-215ENST00000447232 EFCAB2Q5VUJ9 269 aa5.79□□□□□ -1.48
PMS1-215ENST00000447232 MED14O60244 1454 aa5.79□□□□□ -1.48
PMS1-215ENST00000447232 FAM135BQ49AJ0 1406 aa5.79□□□□□ -1.48
PMS1-215ENST00000447232 CLTCQ00610 1675 aaKnown RBP5.78□□□□□ -1.48
PMS1-215ENST00000447232 KIDINS220Q9ULH0 1771 aa5.78□□□□□ -1.48
PMS1-215ENST00000447232 DEPDC5O75140 1603 aa5.78□□□□□ -1.48
PMS1-215ENST00000447232 PRXQ9BXM0 1461 aa5.77□□□□□ -1.49
PMS1-215ENST00000447232 EMP3P54852 163 aa5.77□□□□□ -1.49
PMS1-215ENST00000447232 POTEB3A0JP26 581 aa5.76□□□□□ -1.49
PMS1-215ENST00000447232 POTEBQ6S5H4 581 aa5.76□□□□□ -1.49
PMS1-215ENST00000447232 CDK12Q9NYV4 1490 aaPredicted RBP5.76□□□□□ -1.49
PMS1-215ENST00000447232 XIRP1Q702N8 1843 aaKnown RBP5.76□□□□□ -1.49
PMS1-215ENST00000447232 NPHP4O75161 1426 aaPredicted RBP5.76□□□□□ -1.49
PMS1-215ENST00000447232 IQGAP1P46940 1657 aa5.76□□□□□ -1.49
PMS1-215ENST00000447232 SUPT5HO00267 1087 aaKnown RBP5.75□□□□□ -1.49
PMS1-215ENST00000447232 HOXB1P14653 301 aaPredicted RBP5.75□□□□□ -1.49
PMS1-215ENST00000447232 DOK7Q18PE1 504 aa5.75□□□□□ -1.49
PMS1-215ENST00000447232 CDK13Q14004 1512 aaKnown RBP5.75□□□□□ -1.49
PMS1-215ENST00000447232 ZNF710Q8N1W2 664 aa5.75□□□□□ -1.49
PMS1-215ENST00000447232 SETBP1Q9Y6X0 1596 aa5.75□□□□□ -1.49
PMS1-215ENST00000447232 FAM205CA6NFA0 338 aa5.74□□□□□ -1.49
PMS1-215ENST00000447232 ANKLE2Q86XL3 938 aa5.74□□□□□ -1.49
PMS1-215ENST00000447232 TRIM52Q96A61 297 aa5.74□□□□□ -1.49
PMS1-215ENST00000447232 HS3ST6Q96QI5 342 aa5.74□□□□□ -1.49
PMS1-215ENST00000447232 MYT1LQ9UL68 1186 aa5.74□□□□□ -1.49
PMS1-215ENST00000447232 ARHGAP5Q13017 1502 aa5.74□□□□□ -1.49
PMS1-215ENST00000447232 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.74□□□□□ -1.49
PMS1-215ENST00000447232 ABCC1P33527 1531 aa5.74□□□□□ -1.49
PMS1-215ENST00000447232 ITSN2Q9NZM3 1697 aa5.74□□□□□ -1.49
PMS1-215ENST00000447232 ROBO1Q9Y6N7 1651 aa5.74□□□□□ -1.49
PMS1-215ENST00000447232 PLXNC1O60486 1568 aa5.74□□□□□ -1.49
PMS1-215ENST00000447232 KIF14Q15058 1648 aa5.73□□□□□ -1.49
PMS1-215ENST00000447232 ZNF772Q68DY9 489 aaPredicted RBP5.73□□□□□ -1.49
PMS1-215ENST00000447232 LRP6O75581 1613 aa5.73□□□□□ -1.49
PMS1-215ENST00000447232 ZC3H13Q5T200 1668 aaKnown RBP5.73□□□□□ -1.49
PMS1-215ENST00000447232 PPP1R37O75864 691 aa5.72□□□□□ -1.49
PMS1-215ENST00000447232 IFFO2Q5TF58 517 aa5.72□□□□□ -1.49
PMS1-215ENST00000447232 CDC42BPBQ9Y5S2 1711 aa5.72□□□□□ -1.49
PMS1-215ENST00000447232 JCADQ9P266 1359 aa5.72□□□□□ -1.49
PMS1-215ENST00000447232 KIF3CO14782 793 aa5.72□□□□□ -1.49
PMS1-215ENST00000447232 GPR153Q6NV75 609 aa5.72□□□□□ -1.49
PMS1-215ENST00000447232 HS6ST3Q8IZP7 471 aa5.72□□□□□ -1.49
PMS1-215ENST00000447232 RIMBP2O15034 1052 aa5.71□□□□□ -1.49
PMS1-215ENST00000447232 RXRBP28702 533 aa5.71□□□□□ -1.5
PMS1-215ENST00000447232 ZSWIM6Q9HCJ5 1215 aa5.71□□□□□ -1.5
PMS1-215ENST00000447232 TNRQ92752 1358 aa5.71□□□□□ -1.5
PMS1-215ENST00000447232 KDM5DQ9BY66 1539 aa5.7□□□□□ -1.5
PMS1-215ENST00000447232 C2orf72A6NCS6 295 aa5.7□□□□□ -1.5
PMS1-215ENST00000447232 SAMD9LQ8IVG5 1584 aa5.7□□□□□ -1.5
PMS1-215ENST00000447232 UGGT1Q9NYU2 1555 aa5.7□□□□□ -1.5
PMS1-215ENST00000447232 CHGAP10645 457 aaKnown RBP5.7□□□□□ -1.5
PMS1-215ENST00000447232 SPNS2Q8IVW8 549 aa5.7□□□□□ -1.5
PMS1-215ENST00000447232 THEMISQ8N1K5 641 aaPredicted RBP5.7□□□□□ -1.5
PMS1-215ENST00000447232 KRTAP3-3Q9BYR6 98 aa5.7□□□□□ -1.5
PMS1-215ENST00000447232 KRTAP3-2Q9BYR7 98 aa5.7□□□□□ -1.5
PMS1-215ENST00000447232 PHLPP1O60346 1717 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms