RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 NOS1P29475 1434 aa23.97■■□□□ 1.43
SMC6-206ENST00000446852 NRXN1Q9ULB1 1477 aa23.97■■□□□ 1.43
SMC6-206ENST00000446852 CNGB1Q14028 1251 aaPredicted RBP23.96■■□□□ 1.43
SMC6-206ENST00000446852 ADGRF5Q8IZF2 1346 aa23.96■■□□□ 1.43
SMC6-206ENST00000446852 HNRNPUQ00839 825 aaKnown RBP eCLIP23.95■■□□□ 1.42
SMC6-206ENST00000446852 ARHGAP31Q2M1Z3 1444 aa23.93■■□□□ 1.42
SMC6-206ENST00000446852 TMF1P82094 1093 aa23.91■■□□□ 1.42
SMC6-206ENST00000446852 CHGAP10645 457 aaKnown RBP23.9■■□□□ 1.42
SMC6-206ENST00000446852 CFAP70Q5T0N1 1121 aa23.9■■□□□ 1.42
SMC6-206ENST00000446852 FAM9BQ8IZU0 186 aa23.9■■□□□ 1.42
SMC6-206ENST00000446852 REREQ9P2R6 1566 aa23.9■■□□□ 1.42
SMC6-206ENST00000446852 PREX1Q8TCU6 1659 aa23.89■■□□□ 1.41
SMC6-206ENST00000446852 PIK3C2GO75747 1445 aa23.85■■□□□ 1.41
SMC6-206ENST00000446852 PER1O15534 1290 aaPredicted RBP23.85■■□□□ 1.41
SMC6-206ENST00000446852 EIF3AQ14152 1382 aaKnown RBP23.85■■□□□ 1.41
SMC6-206ENST00000446852 MYO5BQ9ULV0 1848 aa23.85■■□□□ 1.41
SMC6-206ENST00000446852 KTN1Q86UP2 1357 aaKnown RBP23.85■■□□□ 1.41
SMC6-206ENST00000446852 SETBP1Q9Y6X0 1596 aa23.85■■□□□ 1.41
SMC6-206ENST00000446852 SUPT16HQ9Y5B9 1047 aaKnown RBP23.84■■□□□ 1.41
SMC6-206ENST00000446852 AGLP35573 1532 aa23.83■■□□□ 1.41
SMC6-206ENST00000446852 MYOM1P52179 1685 aa23.83■■□□□ 1.41
SMC6-206ENST00000446852 NEXMIFQ5QGS0 1516 aa23.83■■□□□ 1.4
SMC6-206ENST00000446852 MYO3AQ8NEV4 1616 aa23.82■■□□□ 1.4
SMC6-206ENST00000446852 RALBP1Q15311 655 aa23.81■■□□□ 1.4
SMC6-206ENST00000446852 RPGRIP1LQ68CZ1 1315 aa23.8■■□□□ 1.4
SMC6-206ENST00000446852 PARD3Q8TEW0 1356 aa23.8■■□□□ 1.4
SMC6-206ENST00000446852 PANK3Q9H999 370 aa23.8■■□□□ 1.4
SMC6-206ENST00000446852 KDM5AP29375 1690 aaKnown RBP23.8■■□□□ 1.4
SMC6-206ENST00000446852 ARHGEF40Q8TER5 1519 aa23.8■■□□□ 1.4
SMC6-206ENST00000446852 MYBBP1AQ9BQG0 1328 aaKnown RBP23.79■■□□□ 1.4
SMC6-206ENST00000446852 ADGRB1O14514 1584 aa23.79■■□□□ 1.4
SMC6-206ENST00000446852 CLTCQ00610 1675 aaKnown RBP23.78■■□□□ 1.4
SMC6-206ENST00000446852 IDI1Q13907 227 aa23.77■■□□□ 1.4
SMC6-206ENST00000446852 TMEM131LA2VDJ0 1609 aa23.77■■□□□ 1.4
SMC6-206ENST00000446852 BRD4O60885 1362 aaPredicted RBP23.76■■□□□ 1.39
SMC6-206ENST00000446852 C14orf93Q9H972 538 aaKnown RBP23.75■■□□□ 1.39
SMC6-206ENST00000446852 ERVK-7P63135 1459 aa23.75■■□□□ 1.39
SMC6-206ENST00000446852 TMC1Q8TDI8 760 aa23.74■■□□□ 1.39
SMC6-206ENST00000446852 PNISRQ8TF01 805 aaKnown RBP23.74■■□□□ 1.39
SMC6-206ENST00000446852 ZBED9Q6R2W3 1325 aa23.74■■□□□ 1.39
SMC6-206ENST00000446852 SLC52A1Q9NWF4 448 aa23.74■■□□□ 1.39
SMC6-206ENST00000446852 CDCA8Q53HL2 280 aa23.73■■□□□ 1.39
SMC6-206ENST00000446852 QRICH2Q9H0J4 1663 aa23.72■■□□□ 1.39
SMC6-206ENST00000446852 FBXO31Q5XUX0 539 aaPredicted RBP23.72■■□□□ 1.39
SMC6-206ENST00000446852 NUTM2DQ5VT03 806 aaPredicted RBP23.71■■□□□ 1.39
SMC6-206ENST00000446852 CC2D1BQ5T0F9 858 aaKnown RBP23.7■■□□□ 1.38
SMC6-206ENST00000446852 SBNO2Q9Y2G9 1366 aa23.7■■□□□ 1.38
SMC6-206ENST00000446852 LRPPRCP42704 1394 aaKnown RBP23.68■■□□□ 1.38
SMC6-206ENST00000446852 VGFO15240 615 aaPredicted RBP23.68■■□□□ 1.38
SMC6-206ENST00000446852 NLRP13Q86W25 1043 aa23.68■■□□□ 1.38
SMC6-206ENST00000446852 TMEM132EQ6IEE7 984 aa23.68■■□□□ 1.38
SMC6-206ENST00000446852 PPP6R1Q9UPN7 881 aa23.68■■□□□ 1.38
SMC6-206ENST00000446852 ARHGEF28Q8N1W1 1705 aaKnown RBP23.67■■□□□ 1.38
SMC6-206ENST00000446852 ZFYVE9O95405 1425 aa23.67■■□□□ 1.38
SMC6-206ENST00000446852 FKBP8Q14318 412 aa23.66■■□□□ 1.38
SMC6-206ENST00000446852 TRAK1Q9UPV9 953 aa23.66■■□□□ 1.38
SMC6-206ENST00000446852 CENPJQ9HC77 1338 aaPredicted RBP23.66■■□□□ 1.38
SMC6-206ENST00000446852 SPATA31D1Q6ZQQ2 1576 aa23.65■■□□□ 1.38
SMC6-206ENST00000446852 SLC24A1O60721 1099 aa23.65■■□□□ 1.38
SMC6-206ENST00000446852 MLECQ14165 292 aa23.64■■□□□ 1.37
SMC6-206ENST00000446852 ASXL1Q8IXJ9 1541 aa23.62■■□□□ 1.37
SMC6-206ENST00000446852 KNSTRNQ9Y448 316 aa23.62■■□□□ 1.37
SMC6-206ENST00000446852 AMER1Q5JTC6 1135 aaPredicted RBP23.61■■□□□ 1.37
SMC6-206ENST00000446852 NEFLP07196 543 aa23.6■■□□□ 1.37
SMC6-206ENST00000446852 SENP3-EIF4A1A0A087X0R7 540 aa23.55■■□□□ 1.36
SMC6-206ENST00000446852 SENP3Q9H4L4 574 aaPredicted RBP23.55■■□□□ 1.36
SMC6-206ENST00000446852 A2ML1A8K2U0 1454 aa23.54■■□□□ 1.36
SMC6-206ENST00000446852 BCANQ96GW7 911 aa23.54■■□□□ 1.36
SMC6-206ENST00000446852 NPC1L1Q9UHC9 1359 aa23.54■■□□□ 1.36
SMC6-206ENST00000446852 TULP4Q9NRJ4 1543 aa23.53■■□□□ 1.36
SMC6-206ENST00000446852 ALKQ9UM73 1620 aa23.51■■□□□ 1.35
SMC6-206ENST00000446852 CARD14Q9BXL6 1004 aa23.51■■□□□ 1.35
SMC6-206ENST00000446852 STAG3Q9UJ98 1225 aa23.51■■□□□ 1.35
SMC6-206ENST00000446852 SMG6Q86US8 1419 aaKnown RBP23.5■■□□□ 1.35
SMC6-206ENST00000446852 PPP2R1AP30153 589 aa23.5■■□□□ 1.35
SMC6-206ENST00000446852 ZMYM3Q14202 1370 aa23.5■■□□□ 1.35
SMC6-206ENST00000446852 PTPRMP28827 1452 aa23.49■■□□□ 1.35
SMC6-206ENST00000446852 SETD1AO15047 1707 aaKnown RBP23.47■■□□□ 1.35
SMC6-206ENST00000446852 BLMP54132 1417 aaPredicted RBP23.46■■□□□ 1.35
SMC6-206ENST00000446852 YTHDC2Q9H6S0 1430 aaKnown RBP23.46■■□□□ 1.35
SMC6-206ENST00000446852 STK26Q9P289 416 aa23.46■■□□□ 1.35
SMC6-206ENST00000446852 ESF1Q9H501 851 aaKnown RBP23.45■■□□□ 1.35
SMC6-206ENST00000446852 RIMS2Q9UQ26 1411 aa23.45■■□□□ 1.34
SMC6-206ENST00000446852 INSRP06213 1382 aa23.44■■□□□ 1.34
SMC6-206ENST00000446852 SLC12A5Q9H2X9 1139 aa23.44■■□□□ 1.34
SMC6-206ENST00000446852 IRX6P78412 446 aaPredicted RBP23.43■■□□□ 1.34
SMC6-206ENST00000446852 NUDCQ9Y266 331 aa23.43■■□□□ 1.34
SMC6-206ENST00000446852 EVC2Q86UK5 1308 aa23.43■■□□□ 1.34
SMC6-206ENST00000446852 SAFB2Q14151 953 aaKnown RBP eCLIP23.42■■□□□ 1.34
SMC6-206ENST00000446852 NSD3Q9BZ95 1437 aa23.42■■□□□ 1.34
SMC6-206ENST00000446852 USP32Q8NFA0 1604 aa23.42■■□□□ 1.34
SMC6-206ENST00000446852 NRXN3Q9Y4C0 1643 aa23.42■■□□□ 1.34
SMC6-206ENST00000446852 PUS7Q96PZ0 661 aaKnown RBP23.4■■□□□ 1.34
SMC6-206ENST00000446852 UBR1Q8IWV7 1749 aa23.39■■□□□ 1.33
SMC6-206ENST00000446852 TNRQ92752 1358 aa23.38■■□□□ 1.33
SMC6-206ENST00000446852 PRAM1Q96QH2 718 aa23.37■■□□□ 1.33
SMC6-206ENST00000446852 CABP2Q9NPB3 220 aa23.37■■□□□ 1.33
SMC6-206ENST00000446852 ADAMTS8Q9UP79 889 aa23.36■■□□□ 1.33
SMC6-206ENST00000446852 SALL2Q9Y467 1007 aaPredicted RBP23.36■■□□□ 1.33
SMC6-206ENST00000446852 DLC1Q96QB1 1528 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms