RNA–Protein interactions for RNA: ENST00000446501.6

BRF1-206, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2 BASIC

Gene BRF1, Length 2,858 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-206ENST00000446501 GGT6Q6P531 493 aa21.54■■□□□ 1.04
BRF1-206ENST00000446501 MADDQ8WXG6 1647 aa21.54■■□□□ 1.04
BRF1-206ENST00000446501 KNSTRNQ9Y448 316 aa21.53■■□□□ 1.04
BRF1-206ENST00000446501 LAMC1P11047 1609 aa21.52■■□□□ 1.04
BRF1-206ENST00000446501 INO80Q9ULG1 1556 aaPredicted RBP21.52■■□□□ 1.04
BRF1-206ENST00000446501 OSCARQ8IYS5 282 aa21.52■■□□□ 1.04
BRF1-206ENST00000446501 SPHKAPQ2M3C7 1700 aa21.5■■□□□ 1.03
BRF1-206ENST00000446501 SENP3Q9H4L4 574 aaPredicted RBP21.5■■□□□ 1.03
BRF1-206ENST00000446501 BRPF3Q9ULD4 1205 aa21.5■■□□□ 1.03
BRF1-206ENST00000446501 RNF17Q9BXT8 1623 aaKnown RBP21.49■■□□□ 1.03
BRF1-206ENST00000446501 ADAMTS8Q9UP79 889 aa21.49■■□□□ 1.03
BRF1-206ENST00000446501 EIF5BO60841 1220 aaKnown RBP21.49■■□□□ 1.03
BRF1-206ENST00000446501 WASHC2CQ9Y4E1 1318 aa21.49■■□□□ 1.03
BRF1-206ENST00000446501 DEPDC5O75140 1603 aa21.48■■□□□ 1.03
BRF1-206ENST00000446501 SCAF11Q99590 1463 aaKnown RBP21.48■■□□□ 1.03
BRF1-206ENST00000446501 PDE4AP27815 886 aa21.48■■□□□ 1.03
BRF1-206ENST00000446501 RCAN3Q9UKA8 241 aa21.48■■□□□ 1.03
BRF1-206ENST00000446501 AMER1Q5JTC6 1135 aaPredicted RBP21.47■■□□□ 1.03
BRF1-206ENST00000446501 EXOC6Q8TAG9 804 aa21.47■■□□□ 1.03
BRF1-206ENST00000446501 TET3O43151 1660 aa21.47■■□□□ 1.03
BRF1-206ENST00000446501 PPP2R1AP30153 589 aa21.46■■□□□ 1.03
BRF1-206ENST00000446501 RAPGEF3O95398 923 aa21.46■■□□□ 1.03
BRF1-206ENST00000446501 RRP1P56182 461 aaKnown RBP21.46■■□□□ 1.03
BRF1-206ENST00000446501 MROH1Q8NDA8 1641 aa21.45■■□□□ 1.02
BRF1-206ENST00000446501 PLIN1O60240 522 aa21.45■■□□□ 1.02
BRF1-206ENST00000446501 NUTM2DQ5VT03 806 aaPredicted RBP21.45■■□□□ 1.02
BRF1-206ENST00000446501 CEP152O94986 1710 aa21.44■■□□□ 1.02
BRF1-206ENST00000446501 VWDEQ8N2E2 1590 aa21.44■■□□□ 1.02
BRF1-206ENST00000446501 CD109Q6YHK3 1445 aa21.44■■□□□ 1.02
BRF1-206ENST00000446501 USP35Q9P2H5 1018 aa21.43■■□□□ 1.02
BRF1-206ENST00000446501 KIDINS220Q9ULH0 1771 aa21.42■■□□□ 1.02
BRF1-206ENST00000446501 IQGAP1P46940 1657 aa21.42■■□□□ 1.02
BRF1-206ENST00000446501 CDCA8Q53HL2 280 aa21.41■■□□□ 1.02
BRF1-206ENST00000446501 TCERG1O14776 1098 aaKnown RBP21.4■■□□□ 1.02
BRF1-206ENST00000446501 PPM1GO15355 546 aaPredicted RBP21.4■■□□□ 1.02
BRF1-206ENST00000446501 SKAP1Q86WV1 359 aa21.4■■□□□ 1.02
BRF1-206ENST00000446501 ZNF518AQ6AHZ1 1483 aa21.4■■□□□ 1.02
BRF1-206ENST00000446501 TMEM132EQ6IEE7 984 aa21.4■■□□□ 1.02
BRF1-206ENST00000446501 TRAK1Q9UPV9 953 aa21.4■■□□□ 1.02
BRF1-206ENST00000446501 STAC3Q96MF2 364 aa21.39■■□□□ 1.01
BRF1-206ENST00000446501 CFAP65Q6ZU64 1925 aaKnown RBP21.39■■□□□ 1.01
BRF1-206ENST00000446501 WDR43Q15061 677 aaKnown RBP eCLIP21.38■■□□□ 1.01
BRF1-206ENST00000446501 CCDC146Q8IYE0 955 aa21.38■■□□□ 1.01
BRF1-206ENST00000446501 BACH2Q9BYV9 841 aa21.38■■□□□ 1.01
BRF1-206ENST00000446501 NOS1P29475 1434 aa21.38■■□□□ 1.01
BRF1-206ENST00000446501 EIF3AQ14152 1382 aaKnown RBP21.37■■□□□ 1.01
BRF1-206ENST00000446501 SLC4A3P48751 1232 aa21.37■■□□□ 1.01
BRF1-206ENST00000446501 PDE3BQ13370 1112 aa21.37■■□□□ 1.01
BRF1-206ENST00000446501 PPRC1Q5VV67 1664 aaKnown RBP21.37■■□□□ 1.01
BRF1-206ENST00000446501 EFCAB6Q5THR3 1501 aa21.36■■□□□ 1.01
BRF1-206ENST00000446501 BLMP54132 1417 aaPredicted RBP21.36■■□□□ 1.01
BRF1-206ENST00000446501 CARD14Q9BXL6 1004 aa21.36■■□□□ 1.01
BRF1-206ENST00000446501 NPATQ14207 1427 aa21.34■■□□□ 1.01
BRF1-206ENST00000446501 GSE1Q14687 1217 aa21.34■■□□□ 1.01
BRF1-206ENST00000446501 POGZQ7Z3K3 1410 aa21.33■■□□□ 1.01
BRF1-206ENST00000446501 ABCA6Q8N139 1617 aa21.33■■□□□ 1.01
BRF1-206ENST00000446501 PLEKHH1Q9ULM0 1364 aa21.33■■□□□ 1
BRF1-206ENST00000446501 TNNT2P45379 298 aaPredicted RBP21.32■■□□□ 1
BRF1-206ENST00000446501 ERVK-7P63135 1459 aa21.32■■□□□ 1
BRF1-206ENST00000446501 MAP3K4Q9Y6R4 1608 aa21.32■■□□□ 1
BRF1-206ENST00000446501 MROH2AA6NES4 1674 aa21.31■■□□□ 1
BRF1-206ENST00000446501 ASXL1Q8IXJ9 1541 aa21.3■■□□□ 1
BRF1-206ENST00000446501 UBE2Q2Q8WVN8 375 aa21.3■■□□□ 1
BRF1-206ENST00000446501 FRMPD1Q5SYB0 1578 aa21.3■■□□□ 1
BRF1-206ENST00000446501 SYNMO15061 1565 aa21.29■■□□□ 1
BRF1-206ENST00000446501 C20orf194Q5TEA3 1177 aa21.29■■□□□ 1
BRF1-206ENST00000446501 MYOM2P54296 1465 aa21.28■■□□□ 1
BRF1-206ENST00000446501 NFKBIBQ15653 356 aa21.28■■□□□ 1
BRF1-206ENST00000446501 FRAT1Q92837 279 aaPredicted RBP21.28■■□□□ 1
BRF1-206ENST00000446501 SLC12A5Q9H2X9 1139 aa21.28■■□□□ 1
BRF1-206ENST00000446501 CENPJQ9HC77 1338 aaPredicted RBP21.28■■□□□ 1
BRF1-206ENST00000446501 DAXXQ9UER7 740 aaPredicted RBP21.27■■□□□ 1
BRF1-206ENST00000446501 MYOM1P52179 1685 aa21.27■■□□□ 1
BRF1-206ENST00000446501 SAFB2Q14151 953 aaKnown RBP eCLIP21.26■□□□□ 0.99
BRF1-206ENST00000446501 CRBNQ96SW2 442 aa21.26■□□□□ 0.99
BRF1-206ENST00000446501 KIF1BO60333 1816 aa21.26■□□□□ 0.99
BRF1-206ENST00000446501 APAF1O14727 1248 aa21.26■□□□□ 0.99
BRF1-206ENST00000446501 CYB5RLQ6IPT4 315 aa21.25■□□□□ 0.99
BRF1-206ENST00000446501 MLH3Q9UHC1 1453 aa21.24■□□□□ 0.99
BRF1-206ENST00000446501 MS4A1P11836 297 aa21.24■□□□□ 0.99
BRF1-206ENST00000446501 C14orf93Q9H972 538 aaKnown RBP21.24■□□□□ 0.99
BRF1-206ENST00000446501 ZMYM4Q5VZL5 1548 aa21.23■□□□□ 0.99
BRF1-206ENST00000446501 DDRGK1Q96HY6 314 aa21.23■□□□□ 0.99
BRF1-206ENST00000446501 SPINK5Q9NQ38 1064 aaPredicted RBP21.23■□□□□ 0.99
BRF1-206ENST00000446501 DUSP27Q5VZP5 1158 aa21.23■□□□□ 0.99
BRF1-206ENST00000446501 LMTK2Q8IWU2 1503 aa21.22■□□□□ 0.99
BRF1-206ENST00000446501 KDM5AP29375 1690 aaKnown RBP21.22■□□□□ 0.99
BRF1-206ENST00000446501 ADGRB3O60242 1522 aa21.22■□□□□ 0.99
BRF1-206ENST00000446501 GOLGA2Q08379 1002 aa21.21■□□□□ 0.99
BRF1-206ENST00000446501 HECW2Q9P2P5 1572 aa21.2■□□□□ 0.98
BRF1-206ENST00000446501 NRXN1Q9ULB1 1477 aa21.2■□□□□ 0.98
BRF1-206ENST00000446501 KIAA1210Q9ULL0 1709 aa21.2■□□□□ 0.98
BRF1-206ENST00000446501 PIK3C2GO75747 1445 aa21.2■□□□□ 0.98
BRF1-206ENST00000446501 INSRP06213 1382 aa21.19■□□□□ 0.98
BRF1-206ENST00000446501 STK26Q9P289 416 aa21.19■□□□□ 0.98
BRF1-206ENST00000446501 DMRT2Q9Y5R5 561 aa21.19■□□□□ 0.98
BRF1-206ENST00000446501 IDI1Q13907 227 aa21.19■□□□□ 0.98
BRF1-206ENST00000446501 ABCC3O15438 1527 aa21.19■□□□□ 0.98
BRF1-206ENST00000446501 ZNF521Q96K83 1311 aa21.18■□□□□ 0.98
BRF1-206ENST00000446501 YEATS2Q9ULM3 1422 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms