RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 NRXN1Q9ULB1 1477 aa21.57■■□□□ 1.04
SNX13-204ENST00000444712 EIF3AQ14152 1382 aaKnown RBP21.57■■□□□ 1.04
SNX13-204ENST00000444712 SYNMO15061 1565 aa21.55■■□□□ 1.04
SNX13-204ENST00000444712 PREX1Q8TCU6 1659 aa21.55■■□□□ 1.04
SNX13-204ENST00000444712 RPGRIP1LQ68CZ1 1315 aa21.54■■□□□ 1.04
SNX13-204ENST00000444712 ARHGEF40Q8TER5 1519 aa21.54■■□□□ 1.04
SNX13-204ENST00000444712 PPP6R1Q9UPN7 881 aa21.54■■□□□ 1.04
SNX13-204ENST00000444712 KTN1Q86UP2 1357 aaKnown RBP21.54■■□□□ 1.04
SNX13-204ENST00000444712 SETBP1Q9Y6X0 1596 aa21.53■■□□□ 1.04
SNX13-204ENST00000444712 TMF1P82094 1093 aa21.53■■□□□ 1.04
SNX13-204ENST00000444712 TESK2Q96S53 571 aa21.52■■□□□ 1.04
SNX13-204ENST00000444712 SLC24A1O60721 1099 aa21.51■■□□□ 1.03
SNX13-204ENST00000444712 MYO3AQ8NEV4 1616 aa21.48■■□□□ 1.03
SNX13-204ENST00000444712 CDCA8Q53HL2 280 aa21.48■■□□□ 1.03
SNX13-204ENST00000444712 SLC52A1Q9NWF4 448 aa21.47■■□□□ 1.03
SNX13-204ENST00000444712 DISP3Q9P2K9 1392 aa21.47■■□□□ 1.03
SNX13-204ENST00000444712 CHGAP10645 457 aaKnown RBP21.46■■□□□ 1.03
SNX13-204ENST00000444712 PIK3C2GO75747 1445 aa21.46■■□□□ 1.03
SNX13-204ENST00000444712 ADGRF5Q8IZF2 1346 aa21.45■■□□□ 1.02
SNX13-204ENST00000444712 MRS2Q9HD23 443 aa21.45■■□□□ 1.02
SNX13-204ENST00000444712 CLTCQ00610 1675 aaKnown RBP21.44■■□□□ 1.02
SNX13-204ENST00000444712 NEXMIFQ5QGS0 1516 aa21.44■■□□□ 1.02
SNX13-204ENST00000444712 KDM5AP29375 1690 aaKnown RBP21.44■■□□□ 1.02
SNX13-204ENST00000444712 RALBP1Q15311 655 aa21.42■■□□□ 1.02
SNX13-204ENST00000444712 TMEM131LA2VDJ0 1609 aa21.41■■□□□ 1.02
SNX13-204ENST00000444712 CFAP70Q5T0N1 1121 aa21.41■■□□□ 1.02
SNX13-204ENST00000444712 ERVK-7P63135 1459 aa21.41■■□□□ 1.02
SNX13-204ENST00000444712 MYO5BQ9ULV0 1848 aa21.4■■□□□ 1.02
SNX13-204ENST00000444712 ZFYVE9O95405 1425 aa21.4■■□□□ 1.02
SNX13-204ENST00000444712 VGFO15240 615 aaPredicted RBP21.39■■□□□ 1.02
SNX13-204ENST00000444712 SBNO2Q9Y2G9 1366 aa21.38■■□□□ 1.01
SNX13-204ENST00000444712 C14orf93Q9H972 538 aaKnown RBP21.37■■□□□ 1.01
SNX13-204ENST00000444712 SPATA31D1Q6ZQQ2 1576 aa21.37■■□□□ 1.01
SNX13-204ENST00000444712 HNRNPUQ00839 825 aaKnown RBP eCLIP21.36■■□□□ 1.01
SNX13-204ENST00000444712 MYBBP1AQ9BQG0 1328 aaKnown RBP21.36■■□□□ 1.01
SNX13-204ENST00000444712 ADGRB1O14514 1584 aa21.36■■□□□ 1.01
SNX13-204ENST00000444712 MYOM1P52179 1685 aa21.35■■□□□ 1.01
SNX13-204ENST00000444712 IDI1Q13907 227 aa21.35■■□□□ 1.01
SNX13-204ENST00000444712 CCDC184Q52MB2 194 aa21.35■■□□□ 1.01
SNX13-204ENST00000444712 BRD4O60885 1362 aaPredicted RBP21.35■■□□□ 1.01
SNX13-204ENST00000444712 PARD3Q8TEW0 1356 aa21.33■■□□□ 1.01
SNX13-204ENST00000444712 QRICH2Q9H0J4 1663 aa21.33■■□□□ 1.01
SNX13-204ENST00000444712 PER1O15534 1290 aaPredicted RBP21.33■■□□□ 1
SNX13-204ENST00000444712 FAM9BQ8IZU0 186 aa21.31■■□□□ 1
SNX13-204ENST00000444712 PANK3Q9H999 370 aa21.3■■□□□ 1
SNX13-204ENST00000444712 ARHGEF28Q8N1W1 1705 aaKnown RBP21.29■■□□□ 1
SNX13-204ENST00000444712 CENPJQ9HC77 1338 aaPredicted RBP21.29■■□□□ 1
SNX13-204ENST00000444712 TMC1Q8TDI8 760 aa21.29■■□□□ 1
SNX13-204ENST00000444712 ESF1Q9H501 851 aaKnown RBP21.28■■□□□ 1
SNX13-204ENST00000444712 NLRP13Q86W25 1043 aa21.26■□□□□ 0.99
SNX13-204ENST00000444712 ZBED9Q6R2W3 1325 aa21.26■□□□□ 0.99
SNX13-204ENST00000444712 CNGB1Q14028 1251 aaPredicted RBP21.24■□□□□ 0.99
SNX13-204ENST00000444712 FBXO31Q5XUX0 539 aaPredicted RBP21.24■□□□□ 0.99
SNX13-204ENST00000444712 ASXL1Q8IXJ9 1541 aa21.24■□□□□ 0.99
SNX13-204ENST00000444712 KNSTRNQ9Y448 316 aa21.23■□□□□ 0.99
SNX13-204ENST00000444712 NPC1L1Q9UHC9 1359 aa21.23■□□□□ 0.99
SNX13-204ENST00000444712 STAG3Q9UJ98 1225 aa21.22■□□□□ 0.99
SNX13-204ENST00000444712 MLECQ14165 292 aa21.21■□□□□ 0.99
SNX13-204ENST00000444712 PNISRQ8TF01 805 aaKnown RBP21.21■□□□□ 0.99
SNX13-204ENST00000444712 TRAK1Q9UPV9 953 aa21.21■□□□□ 0.99
SNX13-204ENST00000444712 A2ML1A8K2U0 1454 aa21.2■□□□□ 0.98
SNX13-204ENST00000444712 LRPPRCP42704 1394 aaKnown RBP21.2■□□□□ 0.98
SNX13-204ENST00000444712 ZMYM3Q14202 1370 aa21.19■□□□□ 0.98
SNX13-204ENST00000444712 PUS7Q96PZ0 661 aaKnown RBP21.19■□□□□ 0.98
SNX13-204ENST00000444712 NEFLP07196 543 aa21.17■□□□□ 0.98
SNX13-204ENST00000444712 INSRP06213 1382 aa21.17■□□□□ 0.98
SNX13-204ENST00000444712 ALKQ9UM73 1620 aa21.17■□□□□ 0.98
SNX13-204ENST00000444712 CC2D1BQ5T0F9 858 aaKnown RBP21.17■□□□□ 0.98
SNX13-204ENST00000444712 TMEM132EQ6IEE7 984 aa21.17■□□□□ 0.98
SNX13-204ENST00000444712 NUTM2DQ5VT03 806 aaPredicted RBP21.16■□□□□ 0.98
SNX13-204ENST00000444712 SUPT16HQ9Y5B9 1047 aaKnown RBP21.15■□□□□ 0.98
SNX13-204ENST00000444712 RIMS2Q9UQ26 1411 aa21.14■□□□□ 0.98
SNX13-204ENST00000444712 EVC2Q86UK5 1308 aa21.13■□□□□ 0.97
SNX13-204ENST00000444712 AMER1Q5JTC6 1135 aaPredicted RBP21.13■□□□□ 0.97
SNX13-204ENST00000444712 USP32Q8NFA0 1604 aa21.12■□□□□ 0.97
SNX13-204ENST00000444712 SETD1AO15047 1707 aaKnown RBP21.12■□□□□ 0.97
SNX13-204ENST00000444712 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.12■□□□□ 0.97
SNX13-204ENST00000444712 YTHDC2Q9H6S0 1430 aaKnown RBP21.11■□□□□ 0.97
SNX13-204ENST00000444712 TNRQ92752 1358 aa21.11■□□□□ 0.97
SNX13-204ENST00000444712 HDGFP51858 240 aaKnown RBP21.1■□□□□ 0.97
SNX13-204ENST00000444712 DLC1Q96QB1 1528 aa21.1■□□□□ 0.97
SNX13-204ENST00000444712 TULP4Q9NRJ4 1543 aa21.1■□□□□ 0.97
SNX13-204ENST00000444712 UBR1Q8IWV7 1749 aa21.1■□□□□ 0.97
SNX13-204ENST00000444712 PTPRMP28827 1452 aa21.1■□□□□ 0.97
SNX13-204ENST00000444712 NINLQ9Y2I6 1382 aa21.08■□□□□ 0.97
SNX13-204ENST00000444712 FER1L4A9Z1Z3 1794 aa21.08■□□□□ 0.97
SNX13-204ENST00000444712 NLRP1Q9C000 1473 aa21.06■□□□□ 0.96
SNX13-204ENST00000444712 NRXN3Q9Y4C0 1643 aa21.05■□□□□ 0.96
SNX13-204ENST00000444712 PPP2R1AP30153 589 aa21.04■□□□□ 0.96
SNX13-204ENST00000444712 SMG6Q86US8 1419 aaKnown RBP21.04■□□□□ 0.96
SNX13-204ENST00000444712 C3P01024 1663 aa21.04■□□□□ 0.96
SNX13-204ENST00000444712 KNDC1Q76NI1 1749 aa21.04■□□□□ 0.96
SNX13-204ENST00000444712 FKBP8Q14318 412 aa21.04■□□□□ 0.96
SNX13-204ENST00000444712 BLMP54132 1417 aaPredicted RBP21.03■□□□□ 0.96
SNX13-204ENST00000444712 TRHP20396 242 aaPredicted RBP21.03■□□□□ 0.96
SNX13-204ENST00000444712 PELP1Q8IZL8 1130 aaKnown RBP21.02■□□□□ 0.96
SNX13-204ENST00000444712 ATAD2Q6PL18 1390 aa21.01■□□□□ 0.95
SNX13-204ENST00000444712 STK26Q9P289 416 aa21.01■□□□□ 0.95
SNX13-204ENST00000444712 NSD3Q9BZ95 1437 aa21.01■□□□□ 0.95
SNX13-204ENST00000444712 ANKRD36BQ8N2N9 1353 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms