RNA–Protein interactions for RNA: ENST00000444272.1

SYNCRIP-203, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 3

Gene SYNCRIP, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-203ENST00000444272 MAST1Q9Y2H9 1570 aa23.56■■□□□ 1.36
SYNCRIP-203ENST00000444272 STAG3Q9UJ98 1225 aa23.55■■□□□ 1.36
SYNCRIP-203ENST00000444272 FYCO1Q9BQS8 1478 aa23.54■■□□□ 1.36
SYNCRIP-203ENST00000444272 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.53■■□□□ 1.36
SYNCRIP-203ENST00000444272 C14orf37Q86TY3 774 aa23.53■■□□□ 1.36
SYNCRIP-203ENST00000444272 CHD2O14647 1828 aaKnown RBP23.53■■□□□ 1.36
SYNCRIP-203ENST00000444272 MROH1Q8NDA8 1641 aa23.52■■□□□ 1.36
SYNCRIP-203ENST00000444272 EFCAB6Q5THR3 1501 aa23.52■■□□□ 1.36
SYNCRIP-203ENST00000444272 CADPS2Q86UW7 1296 aa23.5■■□□□ 1.35
SYNCRIP-203ENST00000444272 BCANQ96GW7 911 aa23.5■■□□□ 1.35
SYNCRIP-203ENST00000444272 SETD5Q9C0A6 1442 aa23.5■■□□□ 1.35
SYNCRIP-203ENST00000444272 BRINP3Q76B58 766 aa23.49■■□□□ 1.35
SYNCRIP-203ENST00000444272 ATF3P18847 181 aa23.47■■□□□ 1.35
SYNCRIP-203ENST00000444272 YY1P25490 414 aa23.47■■□□□ 1.35
SYNCRIP-203ENST00000444272 NCOA3Q9Y6Q9 1424 aa23.47■■□□□ 1.35
SYNCRIP-203ENST00000444272 NHSL1Q5SYE7 1610 aa23.47■■□□□ 1.35
SYNCRIP-203ENST00000444272 EIF2AK4Q9P2K8 1649 aaKnown RBP23.46■■□□□ 1.35
SYNCRIP-203ENST00000444272 ADAMTS2O95450 1211 aa23.44■■□□□ 1.34
SYNCRIP-203ENST00000444272 MTUS2Q5JR59 1369 aa23.43■■□□□ 1.34
SYNCRIP-203ENST00000444272 USP21Q9UK80 565 aa23.43■■□□□ 1.34
SYNCRIP-203ENST00000444272 TRPC5Q9UL62 973 aaPredicted RBP23.43■■□□□ 1.34
SYNCRIP-203ENST00000444272 ASXL1Q8IXJ9 1541 aa23.43■■□□□ 1.34
SYNCRIP-203ENST00000444272 DEFB132Q7Z7B7 95 aa23.42■■□□□ 1.34
SYNCRIP-203ENST00000444272 ARHGAP31Q2M1Z3 1444 aa23.42■■□□□ 1.34
SYNCRIP-203ENST00000444272 PNPLA6Q8IY17 1366 aa23.41■■□□□ 1.34
SYNCRIP-203ENST00000444272 LRRC59Q96AG4 307 aaKnown RBP23.41■■□□□ 1.34
SYNCRIP-203ENST00000444272 C19orf44Q9H6X5 657 aa23.41■■□□□ 1.34
SYNCRIP-203ENST00000444272 BLMP54132 1417 aaPredicted RBP23.4■■□□□ 1.34
SYNCRIP-203ENST00000444272 PSDA5PKW4 1024 aaPredicted RBP23.38■■□□□ 1.33
SYNCRIP-203ENST00000444272 RSPH4AQ5TD94 716 aa23.38■■□□□ 1.33
SYNCRIP-203ENST00000444272 ATRNO75882 1429 aa23.37■■□□□ 1.33
SYNCRIP-203ENST00000444272 TSPY4P0CV99 314 aa23.36■■□□□ 1.33
SYNCRIP-203ENST00000444272 TSPY10P0CW01 314 aa23.36■■□□□ 1.33
SYNCRIP-203ENST00000444272 HRCP23327 699 aa23.36■■□□□ 1.33
SYNCRIP-203ENST00000444272 IDI1Q13907 227 aa23.36■■□□□ 1.33
SYNCRIP-203ENST00000444272 ARHGEF5Q12774 1597 aa23.33■■□□□ 1.33
SYNCRIP-203ENST00000444272 ADGRB3O60242 1522 aa23.33■■□□□ 1.32
SYNCRIP-203ENST00000444272 BCL9LQ86UU0 1499 aa23.31■■□□□ 1.32
SYNCRIP-203ENST00000444272 DDX17Q92841 729 aaKnown RBP23.31■■□□□ 1.32
SYNCRIP-203ENST00000444272 PLEKHG1Q9ULL1 1385 aa23.29■■□□□ 1.32
SYNCRIP-203ENST00000444272 FNBP4Q8N3X1 1017 aaPredicted RBP23.29■■□□□ 1.32
SYNCRIP-203ENST00000444272 EHBP1L1Q8N3D4 1523 aa23.28■■□□□ 1.32
SYNCRIP-203ENST00000444272 SF3B2Q13435 895 aaKnown RBP23.28■■□□□ 1.32
SYNCRIP-203ENST00000444272 MST1RQ04912 1400 aa23.25■■□□□ 1.31
SYNCRIP-203ENST00000444272 CEP162Q5TB80 1403 aa23.25■■□□□ 1.31
SYNCRIP-203ENST00000444272 DCCP43146 1447 aa23.24■■□□□ 1.31
SYNCRIP-203ENST00000444272 PPP1R15AO75807 674 aaPredicted RBP23.23■■□□□ 1.31
SYNCRIP-203ENST00000444272 TBX22Q9Y458 520 aa23.23■■□□□ 1.31
SYNCRIP-203ENST00000444272 ZFYVE9O95405 1425 aa23.22■■□□□ 1.31
SYNCRIP-203ENST00000444272 PTCH1Q13635 1447 aa23.22■■□□□ 1.31
SYNCRIP-203ENST00000444272 UNC13BO14795 1591 aa23.21■■□□□ 1.31
SYNCRIP-203ENST00000444272 MYO5BQ9ULV0 1848 aa23.2■■□□□ 1.3
SYNCRIP-203ENST00000444272 SENP3-EIF4A1A0A087X0R7 540 aa23.2■■□□□ 1.3
SYNCRIP-203ENST00000444272 BRWD3Q6RI45 1802 aa23.19■■□□□ 1.3
SYNCRIP-203ENST00000444272 DUOX2Q9NRD8 1548 aa23.18■■□□□ 1.3
SYNCRIP-203ENST00000444272 GJD4Q96KN9 370 aaPredicted RBP23.18■■□□□ 1.3
SYNCRIP-203ENST00000444272 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.18■■□□□ 1.32e-7■■□□□ 14
SYNCRIP-203ENST00000444272 RIMS2Q9UQ26 1411 aa23.16■■□□□ 1.3
SYNCRIP-203ENST00000444272 SPHKAPQ2M3C7 1700 aa23.15■■□□□ 1.3
SYNCRIP-203ENST00000444272 ADAMTS13Q76LX8 1427 aa23.15■■□□□ 1.3
SYNCRIP-203ENST00000444272 PIK3R4Q99570 1358 aa23.14■■□□□ 1.29
SYNCRIP-203ENST00000444272 NOS1P29475 1434 aa23.13■■□□□ 1.29
SYNCRIP-203ENST00000444272 TRPM2O94759 1503 aa23.12■■□□□ 1.29
SYNCRIP-203ENST00000444272 GLI3P10071 1580 aa23.11■■□□□ 1.29
SYNCRIP-203ENST00000444272 R3HDM1Q15032 1099 aaKnown RBP23.11■■□□□ 1.29
SYNCRIP-203ENST00000444272 AMOTL2Q9Y2J4 779 aa23.11■■□□□ 1.29
SYNCRIP-203ENST00000444272 GCC2Q8IWJ2 1684 aa23.11■■□□□ 1.29
SYNCRIP-203ENST00000444272 HDGFP51858 240 aaKnown RBP23.1■■□□□ 1.29
SYNCRIP-203ENST00000444272 PTPRUQ92729 1446 aa23.09■■□□□ 1.29
SYNCRIP-203ENST00000444272 MARF1Q9Y4F3 1742 aaKnown RBP23.09■■□□□ 1.29
SYNCRIP-203ENST00000444272 SLC52A1Q9NWF4 448 aa23.09■■□□□ 1.29
SYNCRIP-203ENST00000444272 KANK1Q14678 1352 aa23.09■■□□□ 1.29
SYNCRIP-203ENST00000444272 COL22A1Q8NFW1 1626 aaPredicted RBP23.08■■□□□ 1.29
SYNCRIP-203ENST00000444272 BAG6P46379 1132 aa23.08■■□□□ 1.29
SYNCRIP-203ENST00000444272 RALGAPBQ86X10 1494 aa23.08■■□□□ 1.29
SYNCRIP-203ENST00000444272 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.07■■□□□ 1.28
SYNCRIP-203ENST00000444272 LAMC1P11047 1609 aa23.07■■□□□ 1.28
SYNCRIP-203ENST00000444272 LMTK2Q8IWU2 1503 aa23.07■■□□□ 1.28
SYNCRIP-203ENST00000444272 ERBINQ96RT1 1412 aa23.06■■□□□ 1.28
SYNCRIP-203ENST00000444272 SOS2Q07890 1332 aaPredicted RBP23.04■■□□□ 1.28
SYNCRIP-203ENST00000444272 TMEM131LA2VDJ0 1609 aa23.03■■□□□ 1.28
SYNCRIP-203ENST00000444272 KIF15Q9NS87 1388 aa23.02■■□□□ 1.28
SYNCRIP-203ENST00000444272 MYOM2P54296 1465 aa23.02■■□□□ 1.28
SYNCRIP-203ENST00000444272 XRN1Q8IZH2 1706 aaKnown RBP23.02■■□□□ 1.28
SYNCRIP-203ENST00000444272 SEPT12Q8IYM1 358 aa23■■□□□ 1.27
SYNCRIP-203ENST00000444272 ABCF1Q8NE71 845 aaKnown RBP eCLIP23■■□□□ 1.27
SYNCRIP-203ENST00000444272 DCAF8L1A6NGE4 600 aa22.99■■□□□ 1.27
SYNCRIP-203ENST00000444272 NALCNQ8IZF0 1738 aa22.99■■□□□ 1.27
SYNCRIP-203ENST00000444272 EN1Q05925 392 aaPredicted RBP22.98■■□□□ 1.27
SYNCRIP-203ENST00000444272 ZNF784Q8NCA9 323 aaPredicted RBP22.98■■□□□ 1.27
SYNCRIP-203ENST00000444272 ADGRL3Q9HAR2 1447 aa22.98■■□□□ 1.27
SYNCRIP-203ENST00000444272 C1orf167Q5SNV9 1468 aa22.98■■□□□ 1.27
SYNCRIP-203ENST00000444272 CEP350Q5VT06 3117 aa22.97■■□□□ 1.27
SYNCRIP-203ENST00000444272 UTRNP46939 3433 aa22.97■■□□□ 1.27
SYNCRIP-203ENST00000444272 UNC5CLQ8IV45 518 aa22.96■■□□□ 1.27
SYNCRIP-203ENST00000444272 C1QTNF8P60827 252 aa22.95■■□□□ 1.26
SYNCRIP-203ENST00000444272 KRT27Q7Z3Y8 459 aa22.95■■□□□ 1.26
SYNCRIP-203ENST00000444272 RRP7BPQ9NSQ0 103 aa22.95■■□□□ 1.26
SYNCRIP-203ENST00000444272 CHGAP10645 457 aaKnown RBP22.93■■□□□ 1.26
SYNCRIP-203ENST00000444272 ORAI2Q96SN7 254 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms