RNA–Protein interactions for RNA: ENST00000443816.5

FN1-211, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,762 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-211ENST00000443816 PHF14O94880 888 aa13.86□□□□□ -0.19
FN1-211ENST00000443816 KLHL34Q8N239 644 aa13.85□□□□□ -0.19
FN1-211ENST00000443816 FBXW7Q969H0 707 aa13.85□□□□□ -0.19
FN1-211ENST00000443816 DIAPH1O60610 1272 aaKnown RBP13.85□□□□□ -0.19
FN1-211ENST00000443816 SF3A1Q15459 793 aaKnown RBP13.85□□□□□ -0.19
FN1-211ENST00000443816 EIF2S2P20042 333 aaKnown RBP13.84□□□□□ -0.19
FN1-211ENST00000443816 NAP1L5Q96NT1 182 aaPredicted RBP13.84□□□□□ -0.19
FN1-211ENST00000443816 H3BQV1 296 aa13.84□□□□□ -0.19
FN1-211ENST00000443816 IFFO2Q5TF58 517 aa13.84□□□□□ -0.19
FN1-211ENST00000443816 RUFY2Q8WXA3 655 aa13.84□□□□□ -0.19
FN1-211ENST00000443816 EFCAB5A4FU69 1503 aa13.84□□□□□ -0.19
FN1-211ENST00000443816 E9PSI1 815 aa13.84□□□□□ -0.19
FN1-211ENST00000443816 CUL7Q14999 1698 aa13.84□□□□□ -0.19
FN1-211ENST00000443816 CPLX2Q6PUV4 134 aaKnown RBP13.83□□□□□ -0.2
FN1-211ENST00000443816 RILPL2Q969X0 211 aa13.83□□□□□ -0.2
FN1-211ENST00000443816 MFAP1P55081 439 aaKnown RBP13.83□□□□□ -0.2
FN1-211ENST00000443816 CLUAP1Q96AJ1 413 aa13.82□□□□□ -0.2
FN1-211ENST00000443816 PRG4Q92954 1404 aaPredicted RBP13.82□□□□□ -0.2
FN1-211ENST00000443816 FAM184AQ8NB25 1140 aa13.82□□□□□ -0.2
FN1-211ENST00000443816 THEMISQ8N1K5 641 aaPredicted RBP13.82□□□□□ -0.2
FN1-211ENST00000443816 HMGB2P26583 209 aaKnown RBP13.82□□□□□ -0.2
FN1-211ENST00000443816 LAMC3Q9Y6N6 1575 aa13.81□□□□□ -0.2
FN1-211ENST00000443816 RRP7AQ9Y3A4 280 aaKnown RBP13.81□□□□□ -0.2
FN1-211ENST00000443816 RAD21O60216 631 aa13.81□□□□□ -0.2
FN1-211ENST00000443816 TPM2P07951 284 aa13.81□□□□□ -0.2
FN1-211ENST00000443816 HMGXB3Q12766 1538 aa13.81□□□□□ -0.2
FN1-211ENST00000443816 ERICH3Q5RHP9 1530 aa13.81□□□□□ -0.2
FN1-211ENST00000443816 TPD52L1Q16890 204 aaPredicted RBP13.81□□□□□ -0.2
FN1-211ENST00000443816 DNMBPQ6XZF7 1577 aa13.8□□□□□ -0.2
FN1-211ENST00000443816 CREBRFQ8IUR6 639 aa13.8□□□□□ -0.2
FN1-211ENST00000443816 APPP05067 770 aa13.8□□□□□ -0.2
FN1-211ENST00000443816 USP35Q9P2H5 1018 aa13.8□□□□□ -0.2
FN1-211ENST00000443816 WWC1Q8IX03 1113 aa13.8□□□□□ -0.2
FN1-211ENST00000443816 DIAPH3Q9NSV4 1193 aa13.8□□□□□ -0.2
FN1-211ENST00000443816 TSR1Q2NL82 804 aaKnown RBP13.79□□□□□ -0.2
FN1-211ENST00000443816 EHBP1L1Q8N3D4 1523 aa13.79□□□□□ -0.2
FN1-211ENST00000443816 CFAP65Q6ZU64 1925 aaKnown RBP13.79□□□□□ -0.2
FN1-211ENST00000443816 TRDNQ13061 729 aa13.79□□□□□ -0.2
FN1-211ENST00000443816 TRIM29Q14134 588 aa13.79□□□□□ -0.2
FN1-211ENST00000443816 ZKSCAN2Q63HK3 967 aa13.79□□□□□ -0.2
FN1-211ENST00000443816 ERICH2A1L162 156 aa13.79□□□□□ -0.2
FN1-211ENST00000443816 ABTB2Q8N961 1025 aa13.79□□□□□ -0.2
FN1-211ENST00000443816 TXNDC2Q86VQ3 553 aa13.78□□□□□ -0.2
FN1-211ENST00000443816 KRI1Q8N9T8 703 aaKnown RBP13.78□□□□□ -0.2
FN1-211ENST00000443816 RUSC2Q8N2Y8 1516 aa13.78□□□□□ -0.2
FN1-211ENST00000443816 IFIT2P09913 472 aaKnown RBP13.78□□□□□ -0.2
FN1-211ENST00000443816 ANKRD45Q5TZF3 282 aa13.78□□□□□ -0.2
FN1-211ENST00000443816 G3BP1Q13283 466 aaKnown RBP eCLIP13.78□□□□□ -0.22e-53■□□□□ 8.6
FN1-211ENST00000443816 KIF6Q6ZMV9 814 aa13.78□□□□□ -0.2
FN1-211ENST00000443816 FGD6Q6ZV73 1430 aa13.78□□□□□ -0.2
FN1-211ENST00000443816 IGF1RP08069 1367 aa13.78□□□□□ -0.2
FN1-211ENST00000443816 TOP2BQ02880 1626 aa13.78□□□□□ -0.2
FN1-211ENST00000443816 NLRP2Q9NX02 1062 aa13.77□□□□□ -0.2
FN1-211ENST00000443816 ATP6V1DQ9Y5K8 247 aa13.77□□□□□ -0.2
FN1-211ENST00000443816 CASKIN1Q8WXD9 1431 aa13.77□□□□□ -0.2
FN1-211ENST00000443816 PROSER2Q86WR7 435 aaPredicted RBP13.77□□□□□ -0.2
FN1-211ENST00000443816 RIC3Q7Z5B4 369 aa13.77□□□□□ -0.21
FN1-211ENST00000443816 TSPYL4Q9UJ04 414 aa13.77□□□□□ -0.21
FN1-211ENST00000443816 RIPK4P57078 832 aa13.77□□□□□ -0.21
FN1-211ENST00000443816 ESCO1Q5FWF5 840 aa13.77□□□□□ -0.21
FN1-211ENST00000443816 ANKRD50Q9ULJ7 1429 aa13.76□□□□□ -0.21
FN1-211ENST00000443816 LRRC9Q6ZRR7 1453 aa13.76□□□□□ -0.21
FN1-211ENST00000443816 ELL2O00472 640 aaPredicted RBP13.76□□□□□ -0.21
FN1-211ENST00000443816 RNF20Q5VTR2 975 aa13.75□□□□□ -0.21
FN1-211ENST00000443816 CCDC43Q96MW1 224 aaKnown RBP13.75□□□□□ -0.21
FN1-211ENST00000443816 KIF14Q15058 1648 aa13.75□□□□□ -0.21
FN1-211ENST00000443816 A0A0U1RQG5 324 aaPredicted RBP13.75□□□□□ -0.21
FN1-211ENST00000443816 HSP90AB4PQ58FF6 505 aa13.75□□□□□ -0.21
FN1-211ENST00000443816 CNKSR2Q8WXI2 1034 aa13.75□□□□□ -0.21
FN1-211ENST00000443816 SNAPC4Q5SXM2 1469 aa13.74□□□□□ -0.21
FN1-211ENST00000443816 CCDC47Q96A33 483 aaKnown RBP13.74□□□□□ -0.21
FN1-211ENST00000443816 PES1O00541 588 aaKnown RBP13.74□□□□□ -0.21
FN1-211ENST00000443816 TPM3P06753 285 aa13.74□□□□□ -0.21
FN1-211ENST00000443816 ZKSCAN1P17029 563 aaPredicted RBP13.74□□□□□ -0.21
FN1-211ENST00000443816 NLRP6P59044 892 aa13.74□□□□□ -0.21
FN1-211ENST00000443816 API5Q9BZZ5 524 aaKnown RBP13.74□□□□□ -0.21
FN1-211ENST00000443816 DHX16O60231 1041 aaKnown RBP13.74□□□□□ -0.21
FN1-211ENST00000443816 NECTIN2Q92692 538 aa13.74□□□□□ -0.21
FN1-211ENST00000443816 FKBP5Q13451 457 aaPredicted RBP13.74□□□□□ -0.21
FN1-211ENST00000443816 RUNDC1Q96C34 613 aa13.74□□□□□ -0.21
FN1-211ENST00000443816 DDX19BQ9UMR2 479 aa13.74□□□□□ -0.21
FN1-211ENST00000443816 HOOK1Q9UJC3 728 aaKnown RBP13.74□□□□□ -0.21
FN1-211ENST00000443816 TOPBP1Q92547 1522 aa13.73□□□□□ -0.21
FN1-211ENST00000443816 NOL8Q76FK4 1167 aaKnown RBP13.73□□□□□ -0.21
FN1-211ENST00000443816 ANKLE2Q86XL3 938 aa13.73□□□□□ -0.21
FN1-211ENST00000443816 SCAPERQ9BY12 1400 aa13.73□□□□□ -0.21
FN1-211ENST00000443816 NCOA2Q15596 1464 aa13.73□□□□□ -0.21
FN1-211ENST00000443816 TPM1P09493 284 aa13.73□□□□□ -0.21
FN1-211ENST00000443816 GNAI1P63096 354 aa13.73□□□□□ -0.21
FN1-211ENST00000443816 CENPQQ7L2Z9 268 aaPredicted RBP13.73□□□□□ -0.21
FN1-211ENST00000443816 REC8O95072 547 aa13.72□□□□□ -0.21
FN1-211ENST00000443816 CFTRP13569 1480 aa13.72□□□□□ -0.21
FN1-211ENST00000443816 NESP48681 1621 aa13.71□□□□□ -0.21
FN1-211ENST00000443816 ERC2O15083 957 aa13.71□□□□□ -0.21
FN1-211ENST00000443816 EPRSP07814 1512 aaKnown RBP13.71□□□□□ -0.21
FN1-211ENST00000443816 PLEKHO1Q53GL0 409 aaPredicted RBP13.71□□□□□ -0.21
FN1-211ENST00000443816 IQGAP2Q13576 1575 aa13.71□□□□□ -0.21
FN1-211ENST00000443816 SLKQ9H2G2 1235 aaPredicted RBP13.7□□□□□ -0.22
FN1-211ENST00000443816 SYNJ1O43426 1573 aa13.7□□□□□ -0.22
FN1-211ENST00000443816 CPLX1O14810 134 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms