RNA–Protein interactions for RNA: ENST00000440223.5

UBE2F-214, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 3

Gene UBE2F, Length 830 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-214ENST00000440223 LTBP4Q8N2S1 1624 aa23.38■■□□□ 1.33
UBE2F-214ENST00000440223 LTKP29376 864 aa23.37■■□□□ 1.33
UBE2F-214ENST00000440223 ZFYVE9O95405 1425 aa23.36■■□□□ 1.33
UBE2F-214ENST00000440223 ZNF335Q9H4Z2 1342 aaPredicted RBP23.35■■□□□ 1.33
UBE2F-214ENST00000440223 RIMS2Q9UQ26 1411 aa23.35■■□□□ 1.33
UBE2F-214ENST00000440223 HDGFP51858 240 aaKnown RBP23.35■■□□□ 1.33
UBE2F-214ENST00000440223 CERKQ8TCT0 537 aa23.35■■□□□ 1.33
UBE2F-214ENST00000440223 MPHOSPH9Q99550 1183 aa23.35■■□□□ 1.33
UBE2F-214ENST00000440223 PPP1R15AO75807 674 aaPredicted RBP23.31■■□□□ 1.32
UBE2F-214ENST00000440223 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.31■■□□□ 1.32
UBE2F-214ENST00000440223 CPS1P31327 1500 aa23.31■■□□□ 1.32
UBE2F-214ENST00000440223 IQSEC2Q5JU85 1478 aa23.3■■□□□ 1.32
UBE2F-214ENST00000440223 PLEKHG1Q9ULL1 1385 aa23.28■■□□□ 1.32
UBE2F-214ENST00000440223 FOXD1Q16676 465 aa23.28■■□□□ 1.32
UBE2F-214ENST00000440223 CCDC144AA2RUR9 1427 aa23.27■■□□□ 1.32
UBE2F-214ENST00000440223 ZNF326Q5BKZ1 582 aaKnown RBP23.26■■□□□ 1.31
UBE2F-214ENST00000440223 BCANQ96GW7 911 aa23.25■■□□□ 1.31
UBE2F-214ENST00000440223 STRCP1A6NGW2 1772 aa23.24■■□□□ 1.31
UBE2F-214ENST00000440223 NEXMIFQ5QGS0 1516 aa23.23■■□□□ 1.31
UBE2F-214ENST00000440223 DIP2AQ14689 1571 aa23.23■■□□□ 1.31
UBE2F-214ENST00000440223 FBXO41Q8TF61 875 aa23.23■■□□□ 1.31
UBE2F-214ENST00000440223 NUTM2DQ5VT03 806 aaPredicted RBP23.2■■□□□ 1.3
UBE2F-214ENST00000440223 SLC26A8Q96RN1 970 aa23.19■■□□□ 1.3
UBE2F-214ENST00000440223 PPLO60437 1756 aa23.19■■□□□ 1.3
UBE2F-214ENST00000440223 SETBP1Q9Y6X0 1596 aa23.18■■□□□ 1.3
UBE2F-214ENST00000440223 ILDR1Q86SU0 546 aaPredicted RBP23.17■■□□□ 1.3
UBE2F-214ENST00000440223 NWD1Q149M9 1564 aa23.17■■□□□ 1.3
UBE2F-214ENST00000440223 RPGRIP1LQ68CZ1 1315 aa23.16■■□□□ 1.3
UBE2F-214ENST00000440223 ANKRD30BQ9BXX2 1392 aa23.15■■□□□ 1.3
UBE2F-214ENST00000440223 SENP3Q9H4L4 574 aaPredicted RBP23.15■■□□□ 1.3
UBE2F-214ENST00000440223 ADAMTS13Q76LX8 1427 aa23.15■■□□□ 1.3
UBE2F-214ENST00000440223 NRXN3Q9Y4C0 1643 aa23.15■■□□□ 1.3
UBE2F-214ENST00000440223 CHD2O14647 1828 aaKnown RBP23.15■■□□□ 1.3
UBE2F-214ENST00000440223 LRRC7Q96NW7 1537 aa23.13■■□□□ 1.29
UBE2F-214ENST00000440223 NKTRP30414 1462 aaKnown RBP23.13■■□□□ 1.29
UBE2F-214ENST00000440223 TBX22Q9Y458 520 aa23.13■■□□□ 1.29
UBE2F-214ENST00000440223 SPATA31E1Q6ZUB1 1445 aa23.13■■□□□ 1.29
UBE2F-214ENST00000440223 IFT172Q9UG01 1749 aa23.13■■□□□ 1.29
UBE2F-214ENST00000440223 KCNA6P17658 529 aa23.12■■□□□ 1.29
UBE2F-214ENST00000440223 VGFO15240 615 aaPredicted RBP23.11■■□□□ 1.29
UBE2F-214ENST00000440223 NEUROD1Q13562 356 aa23.11■■□□□ 1.29
UBE2F-214ENST00000440223 TIMELESSQ9UNS1 1208 aa23.11■■□□□ 1.29
UBE2F-214ENST00000440223 PIK3R4Q99570 1358 aa23.11■■□□□ 1.29
UBE2F-214ENST00000440223 TONSLQ96HA7 1378 aa23.1■■□□□ 1.29
UBE2F-214ENST00000440223 SIN3AQ96ST3 1273 aa23.09■■□□□ 1.29
UBE2F-214ENST00000440223 XIRP1Q702N8 1843 aaKnown RBP23.08■■□□□ 1.28
UBE2F-214ENST00000440223 RGL3Q3MIN7 710 aa23.06■■□□□ 1.28
UBE2F-214ENST00000440223 UBAP1LF5GYI3 381 aa23.04■■□□□ 1.28
UBE2F-214ENST00000440223 SETD1AO15047 1707 aaKnown RBP23.04■■□□□ 1.28
UBE2F-214ENST00000440223 XRN1Q8IZH2 1706 aaKnown RBP23.02■■□□□ 1.28
UBE2F-214ENST00000440223 PROSER2Q86WR7 435 aaPredicted RBP23.02■■□□□ 1.28
UBE2F-214ENST00000440223 ALKQ9UM73 1620 aa23.01■■□□□ 1.27
UBE2F-214ENST00000440223 TMEM94Q12767 1356 aa23.01■■□□□ 1.27
UBE2F-214ENST00000440223 TOM1O60784 492 aa23■■□□□ 1.27
UBE2F-214ENST00000440223 MYOM2P54296 1465 aa22.99■■□□□ 1.27
UBE2F-214ENST00000440223 PTPRUQ92729 1446 aa22.99■■□□□ 1.27
UBE2F-214ENST00000440223 METP08581 1390 aa22.98■■□□□ 1.27
UBE2F-214ENST00000440223 AMOTL2Q9Y2J4 779 aa22.97■■□□□ 1.27
UBE2F-214ENST00000440223 ADGRF5Q8IZF2 1346 aa22.96■■□□□ 1.27
UBE2F-214ENST00000440223 PIK3C2GO75747 1445 aa22.96■■□□□ 1.27
UBE2F-214ENST00000440223 NCOA3Q9Y6Q9 1424 aa22.96■■□□□ 1.27
UBE2F-214ENST00000440223 LAMC1P11047 1609 aa22.96■■□□□ 1.27
UBE2F-214ENST00000440223 NRXN1Q9ULB1 1477 aa22.93■■□□□ 1.26
UBE2F-214ENST00000440223 MSH6P52701 1360 aa22.93■■□□□ 1.26
UBE2F-214ENST00000440223 SCAF1Q9H7N4 1312 aaKnown RBP22.92■■□□□ 1.26
UBE2F-214ENST00000440223 RBM33Q96EV2 1170 aaKnown RBP22.91■■□□□ 1.26
UBE2F-214ENST00000440223 PTCH1Q13635 1447 aa22.9■■□□□ 1.26
UBE2F-214ENST00000440223 PIP4K2BP78356 416 aa22.89■■□□□ 1.25
UBE2F-214ENST00000440223 C14orf37Q86TY3 774 aa22.89■■□□□ 1.25
UBE2F-214ENST00000440223 STAC3Q96MF2 364 aa22.89■■□□□ 1.25
UBE2F-214ENST00000440223 PRAG1Q86YV5 1406 aa22.89■■□□□ 1.25
UBE2F-214ENST00000440223 KNDC1Q76NI1 1749 aa22.87■■□□□ 1.25
UBE2F-214ENST00000440223 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.87■■□□□ 1.25
UBE2F-214ENST00000440223 DCAF11Q8TEB1 546 aa22.85■■□□□ 1.25
UBE2F-214ENST00000440223 ASXL1Q8IXJ9 1541 aa22.85■■□□□ 1.25
UBE2F-214ENST00000440223 L3MBTL2Q969R5 705 aa22.84■■□□□ 1.25
UBE2F-214ENST00000440223 DCCP43146 1447 aa22.83■■□□□ 1.25
UBE2F-214ENST00000440223 NALCNQ8IZF0 1738 aa22.83■■□□□ 1.25
UBE2F-214ENST00000440223 C19orf44Q9H6X5 657 aa22.82■■□□□ 1.24
UBE2F-214ENST00000440223 C14orf93Q9H972 538 aaKnown RBP22.82■■□□□ 1.24
UBE2F-214ENST00000440223 KDM2AQ9Y2K7 1162 aa22.82■■□□□ 1.24
UBE2F-214ENST00000440223 LRPPRCP42704 1394 aaKnown RBP22.81■■□□□ 1.24
UBE2F-214ENST00000440223 TECPR2O15040 1411 aa22.81■■□□□ 1.24
UBE2F-214ENST00000440223 ADGRL3Q9HAR2 1447 aa22.81■■□□□ 1.24
UBE2F-214ENST00000440223 ROBO2Q9HCK4 1378 aa22.8■■□□□ 1.24
UBE2F-214ENST00000440223 ROBO1Q9Y6N7 1651 aa22.8■■□□□ 1.24
UBE2F-214ENST00000440223 ATF3P18847 181 aa22.79■■□□□ 1.24
UBE2F-214ENST00000440223 CADPS2Q86UW7 1296 aa22.79■■□□□ 1.24
UBE2F-214ENST00000440223 YTHDC2Q9H6S0 1430 aaKnown RBP22.79■■□□□ 1.24
UBE2F-214ENST00000440223 FAM135BQ49AJ0 1406 aa22.78■■□□□ 1.24
UBE2F-214ENST00000440223 CFAP70Q5T0N1 1121 aa22.78■■□□□ 1.24
UBE2F-214ENST00000440223 ABCC11Q96J66 1382 aa22.77■■□□□ 1.24
UBE2F-214ENST00000440223 TMEM132EQ6IEE7 984 aa22.77■■□□□ 1.24
UBE2F-214ENST00000440223 STK26Q9P289 416 aa22.76■■□□□ 1.23
UBE2F-214ENST00000440223 KIAA1210Q9ULL0 1709 aa22.76■■□□□ 1.23
UBE2F-214ENST00000440223 SLAIN2Q9P270 581 aa22.75■■□□□ 1.23
UBE2F-214ENST00000440223 ADGRB1O14514 1584 aa22.75■■□□□ 1.23
UBE2F-214ENST00000440223 HSPA1LP34931 641 aa22.73■■□□□ 1.23
UBE2F-214ENST00000440223 DLC1Q96QB1 1528 aa22.72■■□□□ 1.23
UBE2F-214ENST00000440223 CDC42BPGQ6DT37 1551 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms