RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 MYO5BQ9ULV0 1848 aa17.44■□□□□ 0.38
HSPG2-206ENST00000439717 CCDC144AA2RUR9 1427 aa17.43■□□□□ 0.38
HSPG2-206ENST00000439717 KIF1BO60333 1816 aa17.42■□□□□ 0.38
HSPG2-206ENST00000439717 PPP1R15AO75807 674 aaPredicted RBP17.41■□□□□ 0.38
HSPG2-206ENST00000439717 ZNF326Q5BKZ1 582 aaKnown RBP17.4■□□□□ 0.38
HSPG2-206ENST00000439717 PLEKHG1Q9ULL1 1385 aa17.4■□□□□ 0.38
HSPG2-206ENST00000439717 ZNF335Q9H4Z2 1342 aaPredicted RBP17.39■□□□□ 0.37
HSPG2-206ENST00000439717 LTBP4Q8N2S1 1624 aa17.39■□□□□ 0.37
HSPG2-206ENST00000439717 RPGRIP1LQ68CZ1 1315 aa17.38■□□□□ 0.37
HSPG2-206ENST00000439717 CERKQ8TCT0 537 aa17.37■□□□□ 0.37
HSPG2-206ENST00000439717 ANKRD30BQ9BXX2 1392 aa17.37■□□□□ 0.37
HSPG2-206ENST00000439717 BCANQ96GW7 911 aa17.36■□□□□ 0.37
HSPG2-206ENST00000439717 SPATA31E1Q6ZUB1 1445 aa17.35■□□□□ 0.37
HSPG2-206ENST00000439717 NEXMIFQ5QGS0 1516 aa17.35■□□□□ 0.37
HSPG2-206ENST00000439717 CPS1P31327 1500 aa17.34■□□□□ 0.37
HSPG2-206ENST00000439717 NUTM2DQ5VT03 806 aaPredicted RBP17.34■□□□□ 0.37
HSPG2-206ENST00000439717 VGFO15240 615 aaPredicted RBP17.33■□□□□ 0.36
HSPG2-206ENST00000439717 SLC26A8Q96RN1 970 aa17.33■□□□□ 0.36
HSPG2-206ENST00000439717 TBX22Q9Y458 520 aa17.32■□□□□ 0.36
HSPG2-206ENST00000439717 IQSEC2Q5JU85 1478 aa17.31■□□□□ 0.36
HSPG2-206ENST00000439717 DIP2AQ14689 1571 aa17.31■□□□□ 0.36
HSPG2-206ENST00000439717 SETBP1Q9Y6X0 1596 aa17.3■□□□□ 0.36
HSPG2-206ENST00000439717 ADAMTS13Q76LX8 1427 aa17.3■□□□□ 0.36
HSPG2-206ENST00000439717 RGL3Q3MIN7 710 aa17.29■□□□□ 0.36
HSPG2-206ENST00000439717 PPLO60437 1756 aa17.28■□□□□ 0.36
HSPG2-206ENST00000439717 KCNA6P17658 529 aa17.28■□□□□ 0.36
HSPG2-206ENST00000439717 PIK3R4Q99570 1358 aa17.28■□□□□ 0.36
HSPG2-206ENST00000439717 SENP3Q9H4L4 574 aaPredicted RBP17.27■□□□□ 0.36
HSPG2-206ENST00000439717 STRCP1A6NGW2 1772 aa17.26■□□□□ 0.35
HSPG2-206ENST00000439717 NRXN3Q9Y4C0 1643 aa17.25■□□□□ 0.35
HSPG2-206ENST00000439717 NWD1Q149M9 1564 aa17.25■□□□□ 0.35
HSPG2-206ENST00000439717 FBXO41Q8TF61 875 aa17.25■□□□□ 0.35
HSPG2-206ENST00000439717 IFT172Q9UG01 1749 aa17.24■□□□□ 0.35
HSPG2-206ENST00000439717 LRRC7Q96NW7 1537 aa17.24■□□□□ 0.35
HSPG2-206ENST00000439717 DHX57Q6P158 1386 aaKnown RBP17.23■□□□□ 0.35
HSPG2-206ENST00000439717 NKTRP30414 1462 aaKnown RBP17.23■□□□□ 0.35
HSPG2-206ENST00000439717 CHD2O14647 1828 aaKnown RBP17.22■□□□□ 0.35
HSPG2-206ENST00000439717 ADGRF5Q8IZF2 1346 aa17.21■□□□□ 0.35
HSPG2-206ENST00000439717 MYOM2P54296 1465 aa17.21■□□□□ 0.35
HSPG2-206ENST00000439717 STAC3Q96MF2 364 aa17.21■□□□□ 0.35
HSPG2-206ENST00000439717 METP08581 1390 aa17.19■□□□□ 0.34
HSPG2-206ENST00000439717 ALKQ9UM73 1620 aa17.19■□□□□ 0.34
HSPG2-206ENST00000439717 PCGF6Q9BYE7 350 aa17.19■□□□□ 0.34
HSPG2-206ENST00000439717 NRXN1Q9ULB1 1477 aa17.18■□□□□ 0.34
HSPG2-206ENST00000439717 PROSER2Q86WR7 435 aaPredicted RBP17.18■□□□□ 0.34
HSPG2-206ENST00000439717 AMOTL2Q9Y2J4 779 aa17.18■□□□□ 0.34
HSPG2-206ENST00000439717 PIK3C2GO75747 1445 aa17.18■□□□□ 0.34
HSPG2-206ENST00000439717 PTPRUQ92729 1446 aa17.18■□□□□ 0.34
HSPG2-206ENST00000439717 TMEM94Q12767 1356 aa17.16■□□□□ 0.34
HSPG2-206ENST00000439717 SETD1AO15047 1707 aaKnown RBP17.16■□□□□ 0.34
HSPG2-206ENST00000439717 ILDR1Q86SU0 546 aaPredicted RBP17.16■□□□□ 0.34
HSPG2-206ENST00000439717 DCAF11Q8TEB1 546 aa17.16■□□□□ 0.34
HSPG2-206ENST00000439717 NCOA3Q9Y6Q9 1424 aa17.15■□□□□ 0.34
HSPG2-206ENST00000439717 XRN1Q8IZH2 1706 aaKnown RBP17.15■□□□□ 0.34
HSPG2-206ENST00000439717 UBAP1LF5GYI3 381 aa17.14■□□□□ 0.33
HSPG2-206ENST00000439717 TOM1O60784 492 aa17.14■□□□□ 0.33
HSPG2-206ENST00000439717 XIRP1Q702N8 1843 aaKnown RBP17.13■□□□□ 0.33
HSPG2-206ENST00000439717 C14orf93Q9H972 538 aaKnown RBP17.13■□□□□ 0.33
HSPG2-206ENST00000439717 PRAG1Q86YV5 1406 aa17.13■□□□□ 0.33
HSPG2-206ENST00000439717 SIN3AQ96ST3 1273 aa17.12■□□□□ 0.33
HSPG2-206ENST00000439717 KDM2AQ9Y2K7 1162 aa17.12■□□□□ 0.33
HSPG2-206ENST00000439717 LAMC1P11047 1609 aa17.11■□□□□ 0.33
HSPG2-206ENST00000439717 RBM33Q96EV2 1170 aaKnown RBP17.1■□□□□ 0.33
HSPG2-206ENST00000439717 PTCH1Q13635 1447 aa17.1■□□□□ 0.33
HSPG2-206ENST00000439717 NEUROD1Q13562 356 aa17.09■□□□□ 0.33
HSPG2-206ENST00000439717 CFAP70Q5T0N1 1121 aa17.09■□□□□ 0.33
HSPG2-206ENST00000439717 LRPPRCP42704 1394 aaKnown RBP17.09■□□□□ 0.33
HSPG2-206ENST00000439717 MSH6P52701 1360 aa17.09■□□□□ 0.33
HSPG2-206ENST00000439717 ASXL1Q8IXJ9 1541 aa17.07■□□□□ 0.32
HSPG2-206ENST00000439717 ABCC11Q96J66 1382 aa17.07■□□□□ 0.32
HSPG2-206ENST00000439717 C14orf37Q86TY3 774 aa17.07■□□□□ 0.32
HSPG2-206ENST00000439717 C19orf44Q9H6X5 657 aa17.07■□□□□ 0.32
HSPG2-206ENST00000439717 TECPR2O15040 1411 aa17.06■□□□□ 0.32
HSPG2-206ENST00000439717 TMEM132EQ6IEE7 984 aa17.06■□□□□ 0.32
HSPG2-206ENST00000439717 L3MBTL2Q969R5 705 aa17.06■□□□□ 0.32
HSPG2-206ENST00000439717 YTHDC2Q9H6S0 1430 aaKnown RBP17.05■□□□□ 0.32
HSPG2-206ENST00000439717 ROBO2Q9HCK4 1378 aa17.05■□□□□ 0.32
HSPG2-206ENST00000439717 SIRT1Q96EB6 747 aa17.04■□□□□ 0.32
HSPG2-206ENST00000439717 DCCP43146 1447 aa17.04■□□□□ 0.32
HSPG2-206ENST00000439717 PIP4K2BP78356 416 aa17.03■□□□□ 0.32
HSPG2-206ENST00000439717 CADPS2Q86UW7 1296 aa17.03■□□□□ 0.32
HSPG2-206ENST00000439717 STK26Q9P289 416 aa17.03■□□□□ 0.32
HSPG2-206ENST00000439717 KNDC1Q76NI1 1749 aa17.03■□□□□ 0.32
HSPG2-206ENST00000439717 ADGRB1O14514 1584 aa17.02■□□□□ 0.32
HSPG2-206ENST00000439717 CLSPNQ9HAW4 1339 aa17.02■□□□□ 0.32
HSPG2-206ENST00000439717 ATF3P18847 181 aa17.02■□□□□ 0.32
HSPG2-206ENST00000439717 ADGRL3Q9HAR2 1447 aa17.02■□□□□ 0.31
HSPG2-206ENST00000439717 SCAF1Q9H7N4 1312 aaKnown RBP17.01■□□□□ 0.31
HSPG2-206ENST00000439717 FAM135BQ49AJ0 1406 aa17.01■□□□□ 0.31
HSPG2-206ENST00000439717 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.01■□□□□ 0.31
HSPG2-206ENST00000439717 KIAA1210Q9ULL0 1709 aa17.01■□□□□ 0.31
HSPG2-206ENST00000439717 SLAIN2Q9P270 581 aa17■□□□□ 0.31
HSPG2-206ENST00000439717 TONSLQ96HA7 1378 aa17■□□□□ 0.31
HSPG2-206ENST00000439717 DLC1Q96QB1 1528 aa16.99■□□□□ 0.31
HSPG2-206ENST00000439717 NALCNQ8IZF0 1738 aa16.97■□□□□ 0.31
HSPG2-206ENST00000439717 WAPLQ7Z5K2 1190 aa16.97■□□□□ 0.31
HSPG2-206ENST00000439717 PLEKHH1Q9ULM0 1364 aa16.95■□□□□ 0.3
HSPG2-206ENST00000439717 TRAK1Q9UPV9 953 aa16.95■□□□□ 0.3
HSPG2-206ENST00000439717 PRAM1Q96QH2 718 aa16.94■□□□□ 0.3
HSPG2-206ENST00000439717 NBPF1Q3BBV0 1214 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 142.6 ms