RNA–Protein interactions for RNA: ENST00000439255.1

RPL35A-203, Transcript of ribosomal protein L35a, humanhuman

TSL 5

Gene RPL35A, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL35A-203ENST00000439255 KIF27Q86VH2 1401 aa9.5□□□□□ -0.89
RPL35A-203ENST00000439255 FAM161AQ3B820 660 aa9.5□□□□□ -0.89
RPL35A-203ENST00000439255 SMYD5Q6GMV2 418 aa9.49□□□□□ -0.89
RPL35A-203ENST00000439255 CERKQ8TCT0 537 aa9.49□□□□□ -0.89
RPL35A-203ENST00000439255 ONECUT3O60422 494 aaPredicted RBP9.48□□□□□ -0.89
RPL35A-203ENST00000439255 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.48□□□□□ -0.89
RPL35A-203ENST00000439255 MRPL50Q8N5N7 158 aaKnown RBP9.48□□□□□ -0.89
RPL35A-203ENST00000439255 PRXQ9BXM0 1461 aa9.47□□□□□ -0.89
RPL35A-203ENST00000439255 CUX1P39880 1505 aa9.47□□□□□ -0.89
RPL35A-203ENST00000439255 KCTD12Q96CX2 325 aaKnown RBP9.47□□□□□ -0.89
RPL35A-203ENST00000439255 NBPF3Q9H094 633 aa9.47□□□□□ -0.89
RPL35A-203ENST00000439255 RBM27Q9P2N5 1060 aaKnown RBP9.47□□□□□ -0.89
RPL35A-203ENST00000439255 FCHSD2O94868 740 aa9.46□□□□□ -0.9
RPL35A-203ENST00000439255 RANGAP1P46060 587 aaPredicted RBP9.46□□□□□ -0.9
RPL35A-203ENST00000439255 NUDT18Q6ZVK8 323 aa9.46□□□□□ -0.9
RPL35A-203ENST00000439255 GPIHBP1Q8IV16 184 aa9.46□□□□□ -0.9
RPL35A-203ENST00000439255 TATDN2Q93075 761 aa9.46□□□□□ -0.9
RPL35A-203ENST00000439255 PACS2Q86VP3 889 aa9.45□□□□□ -0.9
RPL35A-203ENST00000439255 PNMA3Q9UL41 463 aa9.45□□□□□ -0.9
RPL35A-203ENST00000439255 LMOD2Q6P5Q4 547 aa9.44□□□□□ -0.9
RPL35A-203ENST00000439255 ZFRQ96KR1 1074 aaKnown RBP9.44□□□□□ -0.9
RPL35A-203ENST00000439255 ADGRG1Q9Y653 693 aa9.43□□□□□ -0.9
RPL35A-203ENST00000439255 CADPSQ9ULU8 1353 aa9.42□□□□□ -0.9
RPL35A-203ENST00000439255 BCAMP50895 628 aa9.42□□□□□ -0.9
RPL35A-203ENST00000439255 HIC1Q14526 733 aa9.42□□□□□ -0.9
RPL35A-203ENST00000439255 FAM98CQ17RN3 349 aaKnown RBP9.42□□□□□ -0.9
RPL35A-203ENST00000439255 WNT2BQ93097 391 aa9.42□□□□□ -0.9
RPL35A-203ENST00000439255 STAC3Q96MF2 364 aa9.42□□□□□ -0.9
RPL35A-203ENST00000439255 EYA1Q99502 592 aa9.42□□□□□ -0.9
RPL35A-203ENST00000439255 PRDM2Q13029 1718 aa9.42□□□□□ -0.9
RPL35A-203ENST00000439255 NBPF26B4DH59 902 aa9.41□□□□□ -0.9
RPL35A-203ENST00000439255 GNPATO15228 680 aa9.41□□□□□ -0.9
RPL35A-203ENST00000439255 THSD4Q6ZMP0 1018 aa9.41□□□□□ -0.9
RPL35A-203ENST00000439255 LAPTM4BQ86VI4 370 aa9.41□□□□□ -0.9
RPL35A-203ENST00000439255 DIEXFQ68CQ4 756 aaKnown RBP9.39□□□□□ -0.91
RPL35A-203ENST00000439255 ARAP1Q96P48 1450 aa9.39□□□□□ -0.91
RPL35A-203ENST00000439255 GOLGA8CPA6NN73 597 aa9.38□□□□□ -0.91
RPL35A-203ENST00000439255 SAMD7Q7Z3H4 446 aa9.38□□□□□ -0.91
RPL35A-203ENST00000439255 PHOX2BQ99453 314 aa9.38□□□□□ -0.91
RPL35A-203ENST00000439255 CUX2O14529 1486 aa9.38□□□□□ -0.91
RPL35A-203ENST00000439255 PTPN5P54829 565 aa9.37□□□□□ -0.91
RPL35A-203ENST00000439255 ANKK1Q8NFD2 765 aa9.37□□□□□ -0.91
RPL35A-203ENST00000439255 NLRP7Q8WX94 980 aa9.37□□□□□ -0.91
RPL35A-203ENST00000439255 SOWAHBA6NEL2 793 aa9.36□□□□□ -0.91
RPL35A-203ENST00000439255 CC2D2AQ9P2K1 1620 aa9.35□□□□□ -0.91
RPL35A-203ENST00000439255 TULP1O00294 542 aaPredicted RBP9.35□□□□□ -0.91
RPL35A-203ENST00000439255 ZC3H15Q8WU90 426 aaKnown RBP9.35□□□□□ -0.91
RPL35A-203ENST00000439255 CENPBP07199 599 aaPredicted RBP9.34□□□□□ -0.91
RPL35A-203ENST00000439255 SWT1Q5T5J6 900 aaKnown RBP9.34□□□□□ -0.91
RPL35A-203ENST00000439255 METTL3Q86U44 580 aaKnown RBP9.34□□□□□ -0.91
RPL35A-203ENST00000439255 PXYLP1Q8TE99 480 aa9.34□□□□□ -0.91
RPL35A-203ENST00000439255 IGF1RP08069 1367 aa9.34□□□□□ -0.91
RPL35A-203ENST00000439255 FGD5Q6ZNL6 1462 aa9.34□□□□□ -0.91
RPL35A-203ENST00000439255 RCCD1A6NED2 376 aa9.33□□□□□ -0.92
RPL35A-203ENST00000439255 WBP1LQ9NX94 342 aa9.33□□□□□ -0.92
RPL35A-203ENST00000439255 CARMIL1Q5VZK9 1371 aa9.33□□□□□ -0.92
RPL35A-203ENST00000439255 FANCD2Q9BXW9 1451 aa9.33□□□□□ -0.92
RPL35A-203ENST00000439255 CLSPNQ9HAW4 1339 aa9.32□□□□□ -0.92
RPL35A-203ENST00000439255 LRCH3Q96II8 777 aa9.32□□□□□ -0.92
RPL35A-203ENST00000439255 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.32□□□□□ -0.92
RPL35A-203ENST00000439255 HCSTQ9UBK5 93 aa9.32□□□□□ -0.92
RPL35A-203ENST00000439255 ARHGAP35Q9NRY4 1499 aa9.32□□□□□ -0.92
RPL35A-203ENST00000439255 RBM46Q8TBY0 533 aaKnown RBP9.31□□□□□ -0.92
RPL35A-203ENST00000439255 BCANQ96GW7 911 aa9.31□□□□□ -0.92
RPL35A-203ENST00000439255 HPS5Q9UPZ3 1129 aa9.31□□□□□ -0.92
RPL35A-203ENST00000439255 ZMYND10O75800 440 aa9.3□□□□□ -0.92
RPL35A-203ENST00000439255 MAP2K5Q13163 448 aa9.3□□□□□ -0.92
RPL35A-203ENST00000439255 TMEM134Q9H6X4 195 aa9.3□□□□□ -0.92
RPL35A-203ENST00000439255 DNMBPQ6XZF7 1577 aa9.29□□□□□ -0.92
RPL35A-203ENST00000439255 DNAJB2P25686 324 aa9.29□□□□□ -0.92
RPL35A-203ENST00000439255 KANK4Q5T7N3 995 aaPredicted RBP9.29□□□□□ -0.92
RPL35A-203ENST00000439255 CCDC102AQ96A19 550 aa9.29□□□□□ -0.92
RPL35A-203ENST00000439255 RRBP1Q9P2E9 1410 aaKnown RBP9.29□□□□□ -0.92
RPL35A-203ENST00000439255 MAP3K1Q13233 1512 aa9.28□□□□□ -0.92
RPL35A-203ENST00000439255 IRF6O14896 467 aa9.28□□□□□ -0.92
RPL35A-203ENST00000439255 FHAD1B1AJZ9 1412 aa9.28□□□□□ -0.92
RPL35A-203ENST00000439255 CCNB3Q8WWL7 1395 aa9.27□□□□□ -0.93
RPL35A-203ENST00000439255 RNF40O75150 1001 aa9.27□□□□□ -0.93
RPL35A-203ENST00000439255 OATP04181 439 aa9.27□□□□□ -0.93
RPL35A-203ENST00000439255 BARGINQ6ZT62 677 aa9.27□□□□□ -0.93
RPL35A-203ENST00000439255 TSR3Q9UJK0 312 aaKnown RBP9.27□□□□□ -0.93
RPL35A-203ENST00000439255 ACIN1Q9UKV3 1341 aaKnown RBP9.27□□□□□ -0.93
RPL35A-203ENST00000439255 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.25□□□□□ -0.93
RPL35A-203ENST00000439255 ABCA10Q8WWZ4 1543 aa9.25□□□□□ -0.93
RPL35A-203ENST00000439255 TOPBP1Q92547 1522 aa9.25□□□□□ -0.93
RPL35A-203ENST00000439255 SLC10A3P09131 477 aa9.24□□□□□ -0.93
RPL35A-203ENST00000439255 APLP1P51693 650 aa9.24□□□□□ -0.93
RPL35A-203ENST00000439255 MINK1Q8N4C8 1332 aaPredicted RBP9.24□□□□□ -0.93
RPL35A-203ENST00000439255 TIAM1Q13009 1591 aa9.24□□□□□ -0.93
RPL35A-203ENST00000439255 DHX57Q6P158 1386 aaKnown RBP9.24□□□□□ -0.93
RPL35A-203ENST00000439255 PPP4CP60510 307 aa9.23□□□□□ -0.93
RPL35A-203ENST00000439255 LAMC3Q9Y6N6 1575 aa9.23□□□□□ -0.93
RPL35A-203ENST00000439255 CUL7Q14999 1698 aa9.23□□□□□ -0.93
RPL35A-203ENST00000439255 POLA1P09884 1462 aaPredicted RBP9.22□□□□□ -0.93
RPL35A-203ENST00000439255 EFCAB5A4FU69 1503 aa9.22□□□□□ -0.93
RPL35A-203ENST00000439255 SLF2Q8IX21 1173 aa9.21□□□□□ -0.94
RPL35A-203ENST00000439255 REPIN1Q9BWE0 567 aaKnown RBP9.21□□□□□ -0.94
RPL35A-203ENST00000439255 LRRC9Q6ZRR7 1453 aa9.21□□□□□ -0.94
RPL35A-203ENST00000439255 RAD54L2Q9Y4B4 1467 aa9.21□□□□□ -0.94
RPL35A-203ENST00000439255 ATP1B4Q9UN42 357 aaPredicted RBP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms