RNA–Protein interactions for RNA: ENST00000435781.5

GTF3A-203, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-203ENST00000435781 HRCP23327 699 aa31.11■■■□□ 2.57
GTF3A-203ENST00000435781 CERKQ8TCT0 537 aa31.09■■■□□ 2.57
GTF3A-203ENST00000435781 STRCP1A6NGW2 1772 aa31.06■■■□□ 2.56
GTF3A-203ENST00000435781 HDGFP51858 240 aaKnown RBP31.04■■■□□ 2.56
GTF3A-203ENST00000435781 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.03■■■□□ 2.56
GTF3A-203ENST00000435781 PLEKHG1Q9ULL1 1385 aa31.03■■■□□ 2.56
GTF3A-203ENST00000435781 PPP1R15AO75807 674 aaPredicted RBP31.02■■■□□ 2.56
GTF3A-203ENST00000435781 CCDC144AA2RUR9 1427 aa31.01■■■□□ 2.55
GTF3A-203ENST00000435781 CPS1P31327 1500 aa31■■■□□ 2.55
GTF3A-203ENST00000435781 NEXMIFQ5QGS0 1516 aa31■■■□□ 2.55
GTF3A-203ENST00000435781 ZNF326Q5BKZ1 582 aaKnown RBP30.99■■■□□ 2.55
GTF3A-203ENST00000435781 NUTM2DQ5VT03 806 aaPredicted RBP30.99■■■□□ 2.55
GTF3A-203ENST00000435781 IQSEC2Q5JU85 1478 aa30.96■■■□□ 2.55
GTF3A-203ENST00000435781 PPLO60437 1756 aa30.96■■■□□ 2.55
GTF3A-203ENST00000435781 BCANQ96GW7 911 aa30.95■■■□□ 2.55
GTF3A-203ENST00000435781 SLC26A8Q96RN1 970 aa30.95■■■□□ 2.55
GTF3A-203ENST00000435781 SENP3Q9H4L4 574 aaPredicted RBP30.95■■■□□ 2.55
GTF3A-203ENST00000435781 DIP2AQ14689 1571 aa30.92■■■□□ 2.54
GTF3A-203ENST00000435781 NRXN3Q9Y4C0 1643 aa30.91■■■□□ 2.54
GTF3A-203ENST00000435781 TRIM26Q12899 539 aaPredicted RBP30.91■■■□□ 2.54
GTF3A-203ENST00000435781 FBXO41Q8TF61 875 aa30.91■■■□□ 2.54
GTF3A-203ENST00000435781 SPATA31E1Q6ZUB1 1445 aa30.9■■■□□ 2.54
GTF3A-203ENST00000435781 ADAMTS13Q76LX8 1427 aa30.9■■■□□ 2.54
GTF3A-203ENST00000435781 CHD2O14647 1828 aaKnown RBP30.9■■■□□ 2.54
GTF3A-203ENST00000435781 SETBP1Q9Y6X0 1596 aa30.89■■■□□ 2.54
GTF3A-203ENST00000435781 IFT172Q9UG01 1749 aa30.89■■■□□ 2.54
GTF3A-203ENST00000435781 ILDR1Q86SU0 546 aaPredicted RBP30.88■■■□□ 2.53
GTF3A-203ENST00000435781 ANKRD30BQ9BXX2 1392 aa30.88■■■□□ 2.53
GTF3A-203ENST00000435781 NWD1Q149M9 1564 aa30.88■■■□□ 2.53
GTF3A-203ENST00000435781 RPGRIP1LQ68CZ1 1315 aa30.86■■■□□ 2.53
GTF3A-203ENST00000435781 XIRP1Q702N8 1843 aaKnown RBP30.85■■■□□ 2.53
GTF3A-203ENST00000435781 LRRC7Q96NW7 1537 aa30.85■■■□□ 2.53
GTF3A-203ENST00000435781 TBX22Q9Y458 520 aa30.84■■■□□ 2.53
GTF3A-203ENST00000435781 KCNA6P17658 529 aa30.81■■■□□ 2.52
GTF3A-203ENST00000435781 RGL3Q3MIN7 710 aa30.8■■■□□ 2.52
GTF3A-203ENST00000435781 VGFO15240 615 aaPredicted RBP30.79■■■□□ 2.52
GTF3A-203ENST00000435781 NKTRP30414 1462 aaKnown RBP30.78■■■□□ 2.52
GTF3A-203ENST00000435781 SETD1AO15047 1707 aaKnown RBP30.78■■■□□ 2.52
GTF3A-203ENST00000435781 PIK3R4Q99570 1358 aa30.77■■■□□ 2.52
GTF3A-203ENST00000435781 XRN1Q8IZH2 1706 aaKnown RBP30.72■■■□□ 2.51
GTF3A-203ENST00000435781 ALKQ9UM73 1620 aa30.71■■■□□ 2.51
GTF3A-203ENST00000435781 PTPRUQ92729 1446 aa30.71■■■□□ 2.51
GTF3A-203ENST00000435781 METP08581 1390 aa30.68■■■□□ 2.5
GTF3A-203ENST00000435781 UBAP1LF5GYI3 381 aa30.68■■■□□ 2.5
GTF3A-203ENST00000435781 PROSER2Q86WR7 435 aaPredicted RBP30.68■■■□□ 2.5
GTF3A-203ENST00000435781 ADGRF5Q8IZF2 1346 aa30.68■■■□□ 2.5
GTF3A-203ENST00000435781 TMEM94Q12767 1356 aa30.67■■■□□ 2.5
GTF3A-203ENST00000435781 MYOM2P54296 1465 aa30.64■■■□□ 2.5
GTF3A-203ENST00000435781 AMOTL2Q9Y2J4 779 aa30.63■■■□□ 2.49
GTF3A-203ENST00000435781 PIK3C2GO75747 1445 aa30.63■■■□□ 2.49
GTF3A-203ENST00000435781 RBM33Q96EV2 1170 aaKnown RBP30.62■■■□□ 2.49
GTF3A-203ENST00000435781 NRXN1Q9ULB1 1477 aa30.61■■■□□ 2.49
GTF3A-203ENST00000435781 DHX57Q6P158 1386 aaKnown RBP30.6■■■□□ 2.49
GTF3A-203ENST00000435781 TOM1O60784 492 aa30.59■■■□□ 2.49
GTF3A-203ENST00000435781 LAMC1P11047 1609 aa30.56■■■□□ 2.48
GTF3A-203ENST00000435781 NCOA3Q9Y6Q9 1424 aa30.55■■■□□ 2.48
GTF3A-203ENST00000435781 ASXL1Q8IXJ9 1541 aa30.54■■■□□ 2.48
GTF3A-203ENST00000435781 MSH6P52701 1360 aa30.52■■■□□ 2.48
GTF3A-203ENST00000435781 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.51■■■□□ 2.47
GTF3A-203ENST00000435781 PRAG1Q86YV5 1406 aa30.51■■■□□ 2.47
GTF3A-203ENST00000435781 DCAF11Q8TEB1 546 aa30.51■■■□□ 2.47
GTF3A-203ENST00000435781 PIP4K2BP78356 416 aa30.5■■■□□ 2.47
GTF3A-203ENST00000435781 PTCH1Q13635 1447 aa30.49■■■□□ 2.47
GTF3A-203ENST00000435781 KNDC1Q76NI1 1749 aa30.49■■■□□ 2.47
GTF3A-203ENST00000435781 SCAF1Q9H7N4 1312 aaKnown RBP30.48■■■□□ 2.47
GTF3A-203ENST00000435781 KDM2AQ9Y2K7 1162 aa30.47■■■□□ 2.47
GTF3A-203ENST00000435781 NALCNQ8IZF0 1738 aa30.47■■■□□ 2.47
GTF3A-203ENST00000435781 C14orf37Q86TY3 774 aa30.46■■■□□ 2.47
GTF3A-203ENST00000435781 STAC3Q96MF2 364 aa30.46■■■□□ 2.47
GTF3A-203ENST00000435781 C14orf93Q9H972 538 aaKnown RBP30.46■■■□□ 2.47
GTF3A-203ENST00000435781 ROBO2Q9HCK4 1378 aa30.45■■■□□ 2.47
GTF3A-203ENST00000435781 CFAP70Q5T0N1 1121 aa30.44■■■□□ 2.46
GTF3A-203ENST00000435781 SIN3AQ96ST3 1273 aa30.44■■■□□ 2.46
GTF3A-203ENST00000435781 TMEM132EQ6IEE7 984 aa30.43■■■□□ 2.46
GTF3A-203ENST00000435781 PCGF6Q9BYE7 350 aa30.43■■■□□ 2.46
GTF3A-203ENST00000435781 LRPPRCP42704 1394 aaKnown RBP30.42■■■□□ 2.46
GTF3A-203ENST00000435781 TECPR2O15040 1411 aa30.41■■■□□ 2.46
GTF3A-203ENST00000435781 C19orf44Q9H6X5 657 aa30.41■■■□□ 2.46
GTF3A-203ENST00000435781 YTHDC2Q9H6S0 1430 aaKnown RBP30.4■■■□□ 2.46
GTF3A-203ENST00000435781 ADGRL3Q9HAR2 1447 aa30.39■■■□□ 2.46
GTF3A-203ENST00000435781 ADGRB1O14514 1584 aa30.38■■■□□ 2.45
GTF3A-203ENST00000435781 STK26Q9P289 416 aa30.38■■■□□ 2.45
GTF3A-203ENST00000435781 ROBO1Q9Y6N7 1651 aa30.38■■■□□ 2.45
GTF3A-203ENST00000435781 ABCC11Q96J66 1382 aa30.38■■■□□ 2.45
GTF3A-203ENST00000435781 DCCP43146 1447 aa30.38■■■□□ 2.45
GTF3A-203ENST00000435781 NEUROD1Q13562 356 aa30.36■■■□□ 2.45
GTF3A-203ENST00000435781 KIAA1210Q9ULL0 1709 aa30.36■■■□□ 2.45
GTF3A-203ENST00000435781 FAM135BQ49AJ0 1406 aa30.34■■■□□ 2.45
GTF3A-203ENST00000435781 ATF3P18847 181 aa30.34■■■□□ 2.45
GTF3A-203ENST00000435781 CADPS2Q86UW7 1296 aa30.34■■■□□ 2.45
GTF3A-203ENST00000435781 SLAIN2Q9P270 581 aa30.33■■■□□ 2.45
GTF3A-203ENST00000435781 L3MBTL2Q969R5 705 aa30.32■■■□□ 2.44
GTF3A-203ENST00000435781 HSPA1LP34931 641 aa30.31■■■□□ 2.44
GTF3A-203ENST00000435781 DLC1Q96QB1 1528 aa30.28■■■□□ 2.44
GTF3A-203ENST00000435781 WAPLQ7Z5K2 1190 aa30.27■■■□□ 2.44
GTF3A-203ENST00000435781 PLEKHH1Q9ULM0 1364 aa30.27■■■□□ 2.44
GTF3A-203ENST00000435781 MST1RQ04912 1400 aa30.26■■■□□ 2.43
GTF3A-203ENST00000435781 CDC42BPGQ6DT37 1551 aa30.25■■■□□ 2.43
GTF3A-203ENST00000435781 SIRT1Q96EB6 747 aa30.25■■■□□ 2.43
GTF3A-203ENST00000435781 ARHGEF28Q8N1W1 1705 aaKnown RBP30.22■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms