RNA–Protein interactions for RNA: ENST00000435145.6

HLA-DQB2-231, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 2,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-231ENST00000435145 KIF3BO15066 747 aa21.48■■□□□ 1.03
HLA-DQB2-231ENST00000435145 RCAN3Q9UKA8 241 aa21.48■■□□□ 1.03
HLA-DQB2-231ENST00000435145 MYOM1P52179 1685 aa21.48■■□□□ 1.03
HLA-DQB2-231ENST00000435145 MAP3K4Q9Y6R4 1608 aa21.47■■□□□ 1.03
HLA-DQB2-231ENST00000435145 AMER1Q5JTC6 1135 aaPredicted RBP21.46■■□□□ 1.03
HLA-DQB2-231ENST00000435145 EIF3AQ14152 1382 aaKnown RBP21.46■■□□□ 1.03
HLA-DQB2-231ENST00000435145 NPC1L1Q9UHC9 1359 aa21.46■■□□□ 1.03
HLA-DQB2-231ENST00000435145 IFT172Q9UG01 1749 aa21.45■■□□□ 1.02
HLA-DQB2-231ENST00000435145 ASXL1Q8IXJ9 1541 aa21.44■■□□□ 1.02
HLA-DQB2-231ENST00000435145 ABCA6Q8N139 1617 aa21.44■■□□□ 1.02
HLA-DQB2-231ENST00000435145 NRXN1Q9ULB1 1477 aa21.44■■□□□ 1.02
HLA-DQB2-231ENST00000435145 PPRC1Q5VV67 1664 aaKnown RBP21.44■■□□□ 1.02
HLA-DQB2-231ENST00000435145 UGGT1Q9NYU2 1555 aa21.43■■□□□ 1.02
HLA-DQB2-231ENST00000435145 ZNF518AQ6AHZ1 1483 aa21.43■■□□□ 1.02
HLA-DQB2-231ENST00000435145 KNSTRNQ9Y448 316 aa21.43■■□□□ 1.02
HLA-DQB2-231ENST00000435145 PPP2R1AP30153 589 aa21.41■■□□□ 1.02
HLA-DQB2-231ENST00000435145 KIF1BO60333 1816 aa21.41■■□□□ 1.02
HLA-DQB2-231ENST00000435145 PIK3C2GO75747 1445 aa21.41■■□□□ 1.02
HLA-DQB2-231ENST00000435145 KDM5AP29375 1690 aaKnown RBP21.4■■□□□ 1.02
HLA-DQB2-231ENST00000435145 CDCA7LQ96GN5 454 aa21.4■■□□□ 1.02
HLA-DQB2-231ENST00000435145 SLC24A1O60721 1099 aa21.39■■□□□ 1.01
HLA-DQB2-231ENST00000435145 SALL2Q9Y467 1007 aaPredicted RBP21.39■■□□□ 1.01
HLA-DQB2-231ENST00000435145 MROH2AA6NES4 1674 aa21.39■■□□□ 1.01
HLA-DQB2-231ENST00000435145 ADGRB3O60242 1522 aa21.38■■□□□ 1.01
HLA-DQB2-231ENST00000435145 MYO3AQ8NEV4 1616 aa21.38■■□□□ 1.01
HLA-DQB2-231ENST00000435145 CFAP74Q9C0B2 1584 aa21.38■■□□□ 1.01
HLA-DQB2-231ENST00000435145 ERVK-7P63135 1459 aa21.37■■□□□ 1.01
HLA-DQB2-231ENST00000435145 ADAMTS8Q9UP79 889 aa21.37■■□□□ 1.01
HLA-DQB2-231ENST00000435145 EXOC6Q8TAG9 804 aa21.36■■□□□ 1.01
HLA-DQB2-231ENST00000435145 ADGRF5Q8IZF2 1346 aa21.36■■□□□ 1.01
HLA-DQB2-231ENST00000435145 SBNO2Q9Y2G9 1366 aa21.36■■□□□ 1.01
HLA-DQB2-231ENST00000435145 POGZQ7Z3K3 1410 aa21.36■■□□□ 1.01
HLA-DQB2-231ENST00000435145 MLH3Q9UHC1 1453 aa21.36■■□□□ 1.01
HLA-DQB2-231ENST00000435145 FRMPD1Q5SYB0 1578 aa21.35■■□□□ 1.01
HLA-DQB2-231ENST00000435145 CFAP70Q5T0N1 1121 aa21.35■■□□□ 1.01
HLA-DQB2-231ENST00000435145 MYT1LQ9UL68 1186 aa21.34■■□□□ 1.01
HLA-DQB2-231ENST00000435145 SETBP1Q9Y6X0 1596 aa21.34■■□□□ 1.01
HLA-DQB2-231ENST00000435145 ZNF521Q96K83 1311 aa21.32■■□□□ 1
HLA-DQB2-231ENST00000435145 PLEKHH1Q9ULM0 1364 aa21.3■■□□□ 1
HLA-DQB2-231ENST00000435145 NPATQ14207 1427 aa21.3■■□□□ 1
HLA-DQB2-231ENST00000435145 CD109Q6YHK3 1445 aa21.3■■□□□ 1
HLA-DQB2-231ENST00000435145 HECW2Q9P2P5 1572 aa21.3■■□□□ 1
HLA-DQB2-231ENST00000435145 WDR43Q15061 677 aaKnown RBP eCLIP21.29■■□□□ 1
HLA-DQB2-231ENST00000435145 NOS1P29475 1434 aa21.28■■□□□ 1
HLA-DQB2-231ENST00000435145 PPLO60437 1756 aa21.27■■□□□ 1
HLA-DQB2-231ENST00000435145 NPM1P06748 294 aaKnown RBP eCLIP21.26■□□□□ 0.99
HLA-DQB2-231ENST00000435145 ADGRB1O14514 1584 aa21.25■□□□□ 0.99
HLA-DQB2-231ENST00000435145 ABCC3O15438 1527 aa21.25■□□□□ 0.99
HLA-DQB2-231ENST00000435145 DUSP27Q5VZP5 1158 aa21.24■□□□□ 0.99
HLA-DQB2-231ENST00000435145 CARD14Q9BXL6 1004 aa21.24■□□□□ 0.99
HLA-DQB2-231ENST00000435145 ZC3H13Q5T200 1668 aaKnown RBP21.24■□□□□ 0.99
HLA-DQB2-231ENST00000435145 ERICH6Q7L0X2 663 aa21.23■□□□□ 0.99
HLA-DQB2-231ENST00000435145 TCERG1O14776 1098 aaKnown RBP21.22■□□□□ 0.99
HLA-DQB2-231ENST00000435145 OSCARQ8IYS5 282 aa21.22■□□□□ 0.99
HLA-DQB2-231ENST00000435145 C14orf93Q9H972 538 aaKnown RBP21.22■□□□□ 0.99
HLA-DQB2-231ENST00000435145 RPGRIP1LQ68CZ1 1315 aa21.21■□□□□ 0.99
HLA-DQB2-231ENST00000435145 NEO1Q92859 1461 aa21.21■□□□□ 0.99
HLA-DQB2-231ENST00000435145 PLIN1O60240 522 aa21.21■□□□□ 0.99
HLA-DQB2-231ENST00000435145 CENPJQ9HC77 1338 aaPredicted RBP21.21■□□□□ 0.99
HLA-DQB2-231ENST00000435145 GOLGA2Q08379 1002 aa21.19■□□□□ 0.98
HLA-DQB2-231ENST00000435145 TRMT2AQ8IZ69 625 aaKnown RBP21.19■□□□□ 0.98
HLA-DQB2-231ENST00000435145 CRBNQ96SW2 442 aa21.19■□□□□ 0.98
HLA-DQB2-231ENST00000435145 PIK3C2BO00750 1634 aa21.18■□□□□ 0.98
HLA-DQB2-231ENST00000435145 CAMSAP1Q5T5Y3 1602 aa21.18■□□□□ 0.98
HLA-DQB2-231ENST00000435145 MS4A1P11836 297 aa21.18■□□□□ 0.98
HLA-DQB2-231ENST00000435145 SLFN5Q08AF3 891 aa21.17■□□□□ 0.98
HLA-DQB2-231ENST00000435145 QRICH2Q9H0J4 1663 aa21.17■□□□□ 0.98
HLA-DQB2-231ENST00000435145 NOP58Q9Y2X3 529 aaKnown RBP21.17■□□□□ 0.98
HLA-DQB2-231ENST00000435145 POLR3AO14802 1390 aaPredicted RBP21.16■□□□□ 0.98
HLA-DQB2-231ENST00000435145 SIGLEC1Q9BZZ2 1709 aa21.15■□□□□ 0.98
HLA-DQB2-231ENST00000435145 NGEFQ8N5V2 710 aa21.15■□□□□ 0.98
HLA-DQB2-231ENST00000435145 USP32Q8NFA0 1604 aa21.14■□□□□ 0.98
HLA-DQB2-231ENST00000435145 GGT6Q6P531 493 aa21.14■□□□□ 0.98
HLA-DQB2-231ENST00000435145 DIP2CQ9Y2E4 1556 aa21.14■□□□□ 0.98
HLA-DQB2-231ENST00000435145 ANP32AP39687 249 aaKnown RBP21.14■□□□□ 0.97
HLA-DQB2-231ENST00000435145 IPO9Q96P70 1041 aaKnown RBP21.14■□□□□ 0.97
HLA-DQB2-231ENST00000435145 ARHGAP31Q2M1Z3 1444 aa21.13■□□□□ 0.97
HLA-DQB2-231ENST00000435145 C20orf194Q5TEA3 1177 aa21.13■□□□□ 0.97
HLA-DQB2-231ENST00000435145 CHGAP10645 457 aaKnown RBP21.12■□□□□ 0.97
HLA-DQB2-231ENST00000435145 NEXMIFQ5QGS0 1516 aa21.11■□□□□ 0.97
HLA-DQB2-231ENST00000435145 PUS7Q96PZ0 661 aaKnown RBP21.11■□□□□ 0.97
HLA-DQB2-231ENST00000435145 NSD3Q9BZ95 1437 aa21.1■□□□□ 0.97
HLA-DQB2-231ENST00000435145 KDM2BQ8NHM5 1336 aa21.1■□□□□ 0.97
HLA-DQB2-231ENST00000435145 APAF1O14727 1248 aa21.1■□□□□ 0.97
HLA-DQB2-231ENST00000435145 CCDC146Q8IYE0 955 aa21.1■□□□□ 0.97
HLA-DQB2-231ENST00000435145 TRAK1Q9UPV9 953 aa21.1■□□□□ 0.97
HLA-DQB2-231ENST00000435145 GLI2P10070 1586 aa21.1■□□□□ 0.97
HLA-DQB2-231ENST00000435145 NKTRP30414 1462 aaKnown RBP21.1■□□□□ 0.97
HLA-DQB2-231ENST00000435145 PAK3O75914 559 aaPredicted RBP21.09■□□□□ 0.97
HLA-DQB2-231ENST00000435145 BACH2Q9BYV9 841 aa21.09■□□□□ 0.97
HLA-DQB2-231ENST00000435145 CFAP65Q6ZU64 1925 aaKnown RBP21.09■□□□□ 0.97
HLA-DQB2-231ENST00000435145 SHPRHQ149N8 1683 aa21.09■□□□□ 0.97
HLA-DQB2-231ENST00000435145 PDE4AP27815 886 aa21.09■□□□□ 0.97
HLA-DQB2-231ENST00000435145 RICTORQ6R327 1708 aa21.08■□□□□ 0.96
HLA-DQB2-231ENST00000435145 ARHGEF28Q8N1W1 1705 aaKnown RBP21.07■□□□□ 0.96
HLA-DQB2-231ENST00000435145 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.07■□□□□ 0.96
HLA-DQB2-231ENST00000435145 SPINK5Q9NQ38 1064 aaPredicted RBP21.07■□□□□ 0.96
HLA-DQB2-231ENST00000435145 ZFYVE9O95405 1425 aa21.06■□□□□ 0.96
HLA-DQB2-231ENST00000435145 E9PSI1 815 aa21.06■□□□□ 0.96
HLA-DQB2-231ENST00000435145 RAPGEF3O95398 923 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms