RNA–Protein interactions for RNA: ENST00000434418.2

LINC01090-202, Transcript of long intergenic non-protein coding RNA 1090, humanhuman

TSL 5 BASIC

Gene LINC01090, Length 560 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01090-202ENST00000434418 CARMIL1Q5VZK9 1371 aa17.07■□□□□ 0.32
LINC01090-202ENST00000434418 GPIHBP1Q8IV16 184 aa17.07■□□□□ 0.32
LINC01090-202ENST00000434418 KIF13AQ9H1H9 1805 aa17.06■□□□□ 0.32
LINC01090-202ENST00000434418 PSEN2P49810 448 aa17.06■□□□□ 0.32
LINC01090-202ENST00000434418 ADCY10Q96PN6 1610 aa17.06■□□□□ 0.32
LINC01090-202ENST00000434418 GPR37O15354 613 aa17.05■□□□□ 0.32
LINC01090-202ENST00000434418 COL9A1P20849 921 aa17.04■□□□□ 0.32
LINC01090-202ENST00000434418 PTPREP23469 700 aa17.04■□□□□ 0.32
LINC01090-202ENST00000434418 NPDC1Q9NQX5 325 aaPredicted RBP17.02■□□□□ 0.32
LINC01090-202ENST00000434418 TTBK1Q5TCY1 1321 aaPredicted RBP17■□□□□ 0.31
LINC01090-202ENST00000434418 IQGAP2Q13576 1575 aa17■□□□□ 0.31
LINC01090-202ENST00000434418 PTGDRQ13258 359 aa16.99■□□□□ 0.31
LINC01090-202ENST00000434418 ARHGAP33O14559 1287 aa16.98■□□□□ 0.31
LINC01090-202ENST00000434418 DMRTA1Q5VZB9 504 aa16.98■□□□□ 0.31
LINC01090-202ENST00000434418 ZC3H15Q8WU90 426 aaKnown RBP16.98■□□□□ 0.31
LINC01090-202ENST00000434418 MAPKBP1O60336 1514 aa16.97■□□□□ 0.31
LINC01090-202ENST00000434418 PPP1R3GB7ZBB8 358 aa16.97■□□□□ 0.31
LINC01090-202ENST00000434418 PBX2P40425 430 aa16.96■□□□□ 0.31
LINC01090-202ENST00000434418 DIP2BQ9P265 1576 aa16.95■□□□□ 0.3
LINC01090-202ENST00000434418 ABCC10Q5T3U5 1492 aa16.95■□□□□ 0.3
LINC01090-202ENST00000434418 PTPRGP23470 1445 aa16.95■□□□□ 0.3
LINC01090-202ENST00000434418 RAPGEF2Q9Y4G8 1499 aa16.94■□□□□ 0.3
LINC01090-202ENST00000434418 FCHSD2O94868 740 aa16.94■□□□□ 0.3
LINC01090-202ENST00000434418 FAM69CQ0P6D2 419 aa16.94■□□□□ 0.3
LINC01090-202ENST00000434418 CARMIL2Q6F5E8 1435 aa16.94■□□□□ 0.3
LINC01090-202ENST00000434418 TPRNQ4KMQ1 711 aa16.93■□□□□ 0.3
LINC01090-202ENST00000434418 KCNH8Q96L42 1107 aa16.93■□□□□ 0.3
LINC01090-202ENST00000434418 KRTAP3-3Q9BYR6 98 aa16.92■□□□□ 0.3
LINC01090-202ENST00000434418 KRTAP3-2Q9BYR7 98 aa16.92■□□□□ 0.3
LINC01090-202ENST00000434418 TNIKQ9UKE5 1360 aa16.91■□□□□ 0.3
LINC01090-202ENST00000434418 FECHP22830 423 aa16.91■□□□□ 0.3
LINC01090-202ENST00000434418 PROX2Q3B8N5 592 aa16.91■□□□□ 0.3
LINC01090-202ENST00000434418 CDAN1Q8IWY9 1227 aa16.91■□□□□ 0.3
LINC01090-202ENST00000434418 DISP1Q96F81 1524 aa16.91■□□□□ 0.3
LINC01090-202ENST00000434418 ZBED2Q9BTP6 218 aa16.89■□□□□ 0.29
LINC01090-202ENST00000434418 PRKCSHP14314 528 aaPredicted RBP16.88■□□□□ 0.29
LINC01090-202ENST00000434418 HIC1Q14526 733 aa16.88■□□□□ 0.29
LINC01090-202ENST00000434418 PADI6Q6TGC4 694 aa16.88■□□□□ 0.29
LINC01090-202ENST00000434418 CERKQ8TCT0 537 aa16.88■□□□□ 0.29
LINC01090-202ENST00000434418 GNPATO15228 680 aa16.87■□□□□ 0.29
LINC01090-202ENST00000434418 LSM11P83369 360 aaKnown RBP eCLIP16.87■□□□□ 0.29
LINC01090-202ENST00000434418 CDCA7LQ96GN5 454 aa16.87■□□□□ 0.29
LINC01090-202ENST00000434418 FAM198AQ9UFP1 575 aa16.87■□□□□ 0.29
LINC01090-202ENST00000434418 TSPOAP1O95153 1857 aa16.86■□□□□ 0.29
LINC01090-202ENST00000434418 UGGT2Q9NYU1 1516 aa16.86■□□□□ 0.29
LINC01090-202ENST00000434418 PRSS12P56730 875 aa16.86■□□□□ 0.29
LINC01090-202ENST00000434418 ABCC2Q92887 1545 aa16.86■□□□□ 0.29
LINC01090-202ENST00000434418 KIAA0556O60303 1618 aa16.85■□□□□ 0.29
LINC01090-202ENST00000434418 CTTNBP2Q8WZ74 1663 aa16.85■□□□□ 0.29
LINC01090-202ENST00000434418 ZMYND10O75800 440 aa16.85■□□□□ 0.29
LINC01090-202ENST00000434418 TSKSQ9UJT2 592 aa16.84■□□□□ 0.29
LINC01090-202ENST00000434418 UACAQ9BZF9 1416 aa16.82■□□□□ 0.28
LINC01090-202ENST00000434418 ASXL2Q76L83 1435 aa16.81■□□□□ 0.28
LINC01090-202ENST00000434418 TRIM6-TRIM34B2RNG4 842 aa16.81■□□□□ 0.28
LINC01090-202ENST00000434418 UHRF1BP1LA0JNW5 1464 aa16.8■□□□□ 0.28
LINC01090-202ENST00000434418 FAM161AQ3B820 660 aa16.8■□□□□ 0.28
LINC01090-202ENST00000434418 BARGINQ6ZT62 677 aa16.8■□□□□ 0.28
LINC01090-202ENST00000434418 ANKRD13DQ6ZTN6 518 aa16.8■□□□□ 0.28
LINC01090-202ENST00000434418 TTC13Q8NBP0 860 aa16.8■□□□□ 0.28
LINC01090-202ENST00000434418 VPS9D1Q9Y2B5 631 aa16.8■□□□□ 0.28
LINC01090-202ENST00000434418 KDM6BO15054 1643 aa16.79■□□□□ 0.28
LINC01090-202ENST00000434418 C3orf80F5H4A9 247 aa16.79■□□□□ 0.28
LINC01090-202ENST00000434418 RBM27Q9P2N5 1060 aaKnown RBP16.79■□□□□ 0.28
LINC01090-202ENST00000434418 PRXQ9BXM0 1461 aa16.78■□□□□ 0.28
LINC01090-202ENST00000434418 ADGRD1Q6QNK2 874 aa16.77■□□□□ 0.28
LINC01090-202ENST00000434418 SLC4A5Q9BY07 1137 aa16.77■□□□□ 0.28
LINC01090-202ENST00000434418 ZCCHC11Q5TAX3 1644 aaKnown RBP16.77■□□□□ 0.27
LINC01090-202ENST00000434418 PLB1Q6P1J6 1458 aa16.76■□□□□ 0.27
LINC01090-202ENST00000434418 KIAA1468Q9P260 1216 aa16.75■□□□□ 0.27
LINC01090-202ENST00000434418 KDM5BQ9UGL1 1544 aa16.75■□□□□ 0.27
LINC01090-202ENST00000434418 MAP2K5Q13163 448 aa16.74■□□□□ 0.27
LINC01090-202ENST00000434418 PPRC1Q5VV67 1664 aaKnown RBP16.74■□□□□ 0.27
LINC01090-202ENST00000434418 TK2O00142 265 aa16.73■□□□□ 0.27
LINC01090-202ENST00000434418 GLI2P10070 1586 aa16.72■□□□□ 0.27
LINC01090-202ENST00000434418 SLC24A3Q9HC58 644 aa16.72■□□□□ 0.27
LINC01090-202ENST00000434418 GOLGA3Q08378 1498 aa16.72■□□□□ 0.27
LINC01090-202ENST00000434418 SMAPO00193 183 aa16.71■□□□□ 0.27
LINC01090-202ENST00000434418 KRI1Q8N9T8 703 aaKnown RBP16.71■□□□□ 0.27
LINC01090-202ENST00000434418 ADGRG1Q9Y653 693 aa16.71■□□□□ 0.27
LINC01090-202ENST00000434418 EPRSP07814 1512 aaKnown RBP16.7■□□□□ 0.26
LINC01090-202ENST00000434418 CCDC102AQ96A19 550 aa16.7■□□□□ 0.26
LINC01090-202ENST00000434418 SEPT9Q9UHD8 586 aaPredicted RBP16.7■□□□□ 0.26
LINC01090-202ENST00000434418 RABGEF1Q9UJ41 708 aa16.7■□□□□ 0.26
LINC01090-202ENST00000434418 PACS2Q86VP3 889 aa16.69■□□□□ 0.26
LINC01090-202ENST00000434418 PNMA3Q9UL41 463 aa16.69■□□□□ 0.26
LINC01090-202ENST00000434418 MAP3K4Q9Y6R4 1608 aa16.68■□□□□ 0.26
LINC01090-202ENST00000434418 IRF6O14896 467 aa16.68■□□□□ 0.26
LINC01090-202ENST00000434418 ONECUT3O60422 494 aaPredicted RBP16.68■□□□□ 0.26
LINC01090-202ENST00000434418 NUDT18Q6ZVK8 323 aa16.68■□□□□ 0.26
LINC01090-202ENST00000434418 ABCA8O94911 1581 aa16.68■□□□□ 0.26
LINC01090-202ENST00000434418 HRO43593 1189 aa16.67■□□□□ 0.26
LINC01090-202ENST00000434418 TATDN2Q93075 761 aa16.67■□□□□ 0.26
LINC01090-202ENST00000434418 MINK1Q8N4C8 1332 aaPredicted RBP16.67■□□□□ 0.26
LINC01090-202ENST00000434418 NBPF26B4DH59 902 aa16.66■□□□□ 0.26
LINC01090-202ENST00000434418 BHMG1C9JSJ3 638 aaPredicted RBP16.66■□□□□ 0.26
LINC01090-202ENST00000434418 WDR7Q9Y4E6 1490 aa16.66■□□□□ 0.26
LINC01090-202ENST00000434418 NLRP7Q8WX94 980 aa16.62■□□□□ 0.25
LINC01090-202ENST00000434418 PHOX2BQ99453 314 aa16.62■□□□□ 0.25
LINC01090-202ENST00000434418 ARID3CA6NKF2 412 aa16.61■□□□□ 0.25
LINC01090-202ENST00000434418 METTL3Q86U44 580 aaKnown RBP16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms