RNA–Protein interactions for RNA: ENST00000434046.6

SYNPO2-203, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-203ENST00000434046 DNMT1P26358 1616 aaKnown RBP9.44□□□□□ -0.9
SYNPO2-203ENST00000434046 RRP9O43818 475 aaKnown RBP9.43□□□□□ -0.9
SYNPO2-203ENST00000434046 NUTM2DQ5VT03 806 aaPredicted RBP9.43□□□□□ -0.9
SYNPO2-203ENST00000434046 GOLGA2Q08379 1002 aa9.43□□□□□ -0.9
SYNPO2-203ENST00000434046 CCDC146Q8IYE0 955 aa9.43□□□□□ -0.9
SYNPO2-203ENST00000434046 EIF3AQ14152 1382 aaKnown RBP9.42□□□□□ -0.9
SYNPO2-203ENST00000434046 NEUROD2Q15784 382 aa9.42□□□□□ -0.9
SYNPO2-203ENST00000434046 PODXL2Q9NZ53 605 aa9.42□□□□□ -0.9
SYNPO2-203ENST00000434046 STK26Q9P289 416 aa9.42□□□□□ -0.9
SYNPO2-203ENST00000434046 TRAK1Q9UPV9 953 aa9.42□□□□□ -0.9
SYNPO2-203ENST00000434046 XRCC6P12956 609 aaKnown RBP eCLIP9.41□□□□□ -0.9
SYNPO2-203ENST00000434046 ADAMTS8Q9UP79 889 aa9.4□□□□□ -0.9
SYNPO2-203ENST00000434046 A0A0U1RQG5 324 aaPredicted RBP9.4□□□□□ -0.91
SYNPO2-203ENST00000434046 COG6Q9Y2V7 657 aa9.4□□□□□ -0.91
SYNPO2-203ENST00000434046 SYCP2Q9BX26 1530 aa9.4□□□□□ -0.91
SYNPO2-203ENST00000434046 MFAP1P55081 439 aaKnown RBP9.39□□□□□ -0.91
SYNPO2-203ENST00000434046 CFAP53Q96M91 514 aa9.39□□□□□ -0.91
SYNPO2-203ENST00000434046 STAC3Q96MF2 364 aa9.39□□□□□ -0.91
SYNPO2-203ENST00000434046 PZPP20742 1482 aa9.39□□□□□ -0.91
SYNPO2-203ENST00000434046 TRAK2O60296 914 aa9.39□□□□□ -0.91
SYNPO2-203ENST00000434046 SRPK2P78362 688 aaKnown RBP9.39□□□□□ -0.91
SYNPO2-203ENST00000434046 PLCH2O75038 1416 aa9.38□□□□□ -0.91
SYNPO2-203ENST00000434046 KDM5BQ9UGL1 1544 aa9.38□□□□□ -0.91
SYNPO2-203ENST00000434046 ESPNB1AK53 854 aa9.38□□□□□ -0.91
SYNPO2-203ENST00000434046 NCLP19338 710 aaKnown RBP9.38□□□□□ -0.91
SYNPO2-203ENST00000434046 MORC1Q86VD1 984 aa9.38□□□□□ -0.91
SYNPO2-203ENST00000434046 GCC2Q8IWJ2 1684 aa9.38□□□□□ -0.91
SYNPO2-203ENST00000434046 BCAR3O75815 825 aa9.38□□□□□ -0.91
SYNPO2-203ENST00000434046 FAM69CQ0P6D2 419 aa9.38□□□□□ -0.91
SYNPO2-203ENST00000434046 CFAP70Q5T0N1 1121 aa9.38□□□□□ -0.91
SYNPO2-203ENST00000434046 HSCBQ8IWL3 235 aa9.38□□□□□ -0.91
SYNPO2-203ENST00000434046 UHRF1BP1LA0JNW5 1464 aa9.37□□□□□ -0.91
SYNPO2-203ENST00000434046 KDM6BO15054 1643 aa9.37□□□□□ -0.91
SYNPO2-203ENST00000434046 RAPGEF3O95398 923 aa9.37□□□□□ -0.91
SYNPO2-203ENST00000434046 SEC24BO95487 1268 aa9.37□□□□□ -0.91
SYNPO2-203ENST00000434046 MSNP26038 577 aaKnown RBP9.37□□□□□ -0.91
SYNPO2-203ENST00000434046 CLCN1P35523 988 aa9.37□□□□□ -0.91
SYNPO2-203ENST00000434046 MRE11P49959 708 aa9.37□□□□□ -0.91
SYNPO2-203ENST00000434046 RBM10P98175 930 aaKnown RBP9.37□□□□□ -0.91
SYNPO2-203ENST00000434046 ABCA8O94911 1581 aa9.37□□□□□ -0.91
SYNPO2-203ENST00000434046 ZBTB7CA1YPR0 619 aa9.37□□□□□ -0.91
SYNPO2-203ENST00000434046 MCM4P33991 863 aa9.37□□□□□ -0.91
SYNPO2-203ENST00000434046 CLUAP1Q96AJ1 413 aa9.37□□□□□ -0.91
SYNPO2-203ENST00000434046 FOXD4L1Q9NU39 408 aa9.37□□□□□ -0.91
SYNPO2-203ENST00000434046 ADGRL2O95490 1459 aa9.37□□□□□ -0.91
SYNPO2-203ENST00000434046 SHANK2Q9UPX8 1470 aa9.37□□□□□ -0.91
SYNPO2-203ENST00000434046 ABCC2Q92887 1545 aa9.37□□□□□ -0.91
SYNPO2-203ENST00000434046 LRPPRCP42704 1394 aaKnown RBP9.36□□□□□ -0.91
SYNPO2-203ENST00000434046 MAPK8IP3Q9UPT6 1336 aa9.36□□□□□ -0.91
SYNPO2-203ENST00000434046 PANK1Q8TE04 598 aa9.36□□□□□ -0.91
SYNPO2-203ENST00000434046 FAM13BQ9NYF5 915 aa9.36□□□□□ -0.91
SYNPO2-203ENST00000434046 FANCAO15360 1455 aa9.36□□□□□ -0.91
SYNPO2-203ENST00000434046 ADGRL1O94910 1474 aa9.36□□□□□ -0.91
SYNPO2-203ENST00000434046 SPATA31E1Q6ZUB1 1445 aa9.36□□□□□ -0.91
SYNPO2-203ENST00000434046 VGFO15240 615 aaPredicted RBP9.35□□□□□ -0.91
SYNPO2-203ENST00000434046 HSP90AB1P08238 724 aaKnown RBP9.35□□□□□ -0.91
SYNPO2-203ENST00000434046 KDM2BQ8NHM5 1336 aa9.35□□□□□ -0.91
SYNPO2-203ENST00000434046 PLEKHG5O94827 1062 aa9.35□□□□□ -0.91
SYNPO2-203ENST00000434046 GRPEL1Q9HAV7 217 aa9.35□□□□□ -0.91
SYNPO2-203ENST00000434046 CHMP5Q9NZZ3 219 aa9.35□□□□□ -0.91
SYNPO2-203ENST00000434046 ABCC10Q5T3U5 1492 aa9.35□□□□□ -0.91
SYNPO2-203ENST00000434046 APAF1O14727 1248 aa9.35□□□□□ -0.91
SYNPO2-203ENST00000434046 BCL2L13Q9BXK5 485 aa9.35□□□□□ -0.91
SYNPO2-203ENST00000434046 LRRIQ1Q96JM4 1722 aa9.35□□□□□ -0.91
SYNPO2-203ENST00000434046 TRAPPC8Q9Y2L5 1435 aa9.35□□□□□ -0.91
SYNPO2-203ENST00000434046 ADCY10Q96PN6 1610 aa9.34□□□□□ -0.91
SYNPO2-203ENST00000434046 CD109Q6YHK3 1445 aa9.34□□□□□ -0.91
SYNPO2-203ENST00000434046 TBC1D2Q9BYX2 928 aa9.34□□□□□ -0.91
SYNPO2-203ENST00000434046 IGHDP01880 384 aa9.34□□□□□ -0.91
SYNPO2-203ENST00000434046 KIAA1211Q6ZU35 1233 aa9.33□□□□□ -0.92
SYNPO2-203ENST00000434046 FAM135AQ9P2D6 1515 aa9.33□□□□□ -0.92
SYNPO2-203ENST00000434046 TMEM132EQ6IEE7 984 aa9.33□□□□□ -0.92
SYNPO2-203ENST00000434046 DDX11L8A8MPP1 907 aa9.33□□□□□ -0.92
SYNPO2-203ENST00000434046 GOLGA6L22H0YM25 854 aa9.33□□□□□ -0.92
SYNPO2-203ENST00000434046 U2SURPO15042 1029 aaKnown RBP9.33□□□□□ -0.92
SYNPO2-203ENST00000434046 CENPJQ9HC77 1338 aaPredicted RBP9.32□□□□□ -0.92
SYNPO2-203ENST00000434046 DUSP27Q5VZP5 1158 aa9.32□□□□□ -0.92
SYNPO2-203ENST00000434046 TEX14Q8IWB6 1497 aa9.32□□□□□ -0.92
SYNPO2-203ENST00000434046 ASXL2Q76L83 1435 aa9.32□□□□□ -0.92
SYNPO2-203ENST00000434046 CGNL1Q0VF96 1302 aa9.32□□□□□ -0.92
SYNPO2-203ENST00000434046 DUOX2Q9NRD8 1548 aa9.32□□□□□ -0.92
SYNPO2-203ENST00000434046 FTSJ3Q8IY81 847 aaKnown RBP9.31□□□□□ -0.92
SYNPO2-203ENST00000434046 GBP4Q96PP9 640 aa9.31□□□□□ -0.92
SYNPO2-203ENST00000434046 MBD5Q9P267 1494 aa9.31□□□□□ -0.92
SYNPO2-203ENST00000434046 WDR7Q9Y4E6 1490 aa9.31□□□□□ -0.92
SYNPO2-203ENST00000434046 TPM2P07951 284 aa9.31□□□□□ -0.92
SYNPO2-203ENST00000434046 PMFBP1Q8TBY8 1022 aa9.31□□□□□ -0.92
SYNPO2-203ENST00000434046 ERBINQ96RT1 1412 aa9.31□□□□□ -0.92
SYNPO2-203ENST00000434046 TULP1O00294 542 aaPredicted RBP9.3□□□□□ -0.92
SYNPO2-203ENST00000434046 HDGFP51858 240 aaKnown RBP9.3□□□□□ -0.92
SYNPO2-203ENST00000434046 C22orf23Q9BZE7 217 aa9.3□□□□□ -0.92
SYNPO2-203ENST00000434046 R3HCC1Q9Y3T6 440 aaKnown RBP9.3□□□□□ -0.92
SYNPO2-203ENST00000434046 RALGAPBQ86X10 1494 aa9.3□□□□□ -0.92
SYNPO2-203ENST00000434046 RWDD1Q9H446 243 aaPredicted RBP9.3□□□□□ -0.92
SYNPO2-203ENST00000434046 RRP7AQ9Y3A4 280 aaKnown RBP9.3□□□□□ -0.92
SYNPO2-203ENST00000434046 DNTTIP2Q5QJE6 756 aaKnown RBP9.29□□□□□ -0.92
SYNPO2-203ENST00000434046 KLHL34Q8N239 644 aa9.29□□□□□ -0.92
SYNPO2-203ENST00000434046 PDZRN3Q9UPQ7 1066 aa9.29□□□□□ -0.92
SYNPO2-203ENST00000434046 DENND4BO75064 1496 aaPredicted RBP9.29□□□□□ -0.92
SYNPO2-203ENST00000434046 ADGBQ8N7X0 1667 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms