RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 FSD2A1L4K1 749 aa14.68□□□□□ -0.06
HMGCS1-202ENST00000433297 PLEKHD1A6NEE1 506 aa14.68□□□□□ -0.06
HMGCS1-202ENST00000433297 MRE11P49959 708 aa14.68□□□□□ -0.06
HMGCS1-202ENST00000433297 ZNF608Q9ULD9 1512 aaPredicted RBP14.68□□□□□ -0.06
HMGCS1-202ENST00000433297 ESPNB1AK53 854 aa14.68□□□□□ -0.06
HMGCS1-202ENST00000433297 NKTRP30414 1462 aaKnown RBP14.68□□□□□ -0.06
HMGCS1-202ENST00000433297 TROQ12816 1431 aaPredicted RBP14.68□□□□□ -0.06
HMGCS1-202ENST00000433297 GRPEL1Q9HAV7 217 aa14.68□□□□□ -0.06
HMGCS1-202ENST00000433297 PCDHB15Q9Y5E8 787 aa14.68□□□□□ -0.06
HMGCS1-202ENST00000433297 C9orf84Q5VXU9 1444 aa14.67□□□□□ -0.06
HMGCS1-202ENST00000433297 PDE3AQ14432 1141 aa14.67□□□□□ -0.06
HMGCS1-202ENST00000433297 INSRP06213 1382 aa14.67□□□□□ -0.06
HMGCS1-202ENST00000433297 CHMP5Q9NZZ3 219 aa14.67□□□□□ -0.06
HMGCS1-202ENST00000433297 COL17A1Q9UMD9 1497 aaPredicted RBP14.67□□□□□ -0.06
HMGCS1-202ENST00000433297 AMER1Q5JTC6 1135 aaPredicted RBP14.67□□□□□ -0.06
HMGCS1-202ENST00000433297 FBLN2P98095 1184 aa14.66□□□□□ -0.06
HMGCS1-202ENST00000433297 TRMT2AQ8IZ69 625 aaKnown RBP14.66□□□□□ -0.06
HMGCS1-202ENST00000433297 PMFBP1Q8TBY8 1022 aa14.66□□□□□ -0.06
HMGCS1-202ENST00000433297 TNNT2P45379 298 aaPredicted RBP14.65□□□□□ -0.06
HMGCS1-202ENST00000433297 C22orf23Q9BZE7 217 aa14.65□□□□□ -0.06
HMGCS1-202ENST00000433297 ERBB4Q15303 1308 aa14.64□□□□□ -0.07
HMGCS1-202ENST00000433297 ADGRL2O95490 1459 aa14.64□□□□□ -0.07
HMGCS1-202ENST00000433297 RLBP1P12271 317 aa14.63□□□□□ -0.07
HMGCS1-202ENST00000433297 FOXD4L1Q9NU39 408 aa14.63□□□□□ -0.07
HMGCS1-202ENST00000433297 HSCBQ8IWL3 235 aa14.62□□□□□ -0.07
HMGCS1-202ENST00000433297 RWDD1Q9H446 243 aaPredicted RBP14.62□□□□□ -0.07
HMGCS1-202ENST00000433297 MAGI2Q86UL8 1455 aa14.62□□□□□ -0.07
HMGCS1-202ENST00000433297 PLB1Q6P1J6 1458 aa14.61□□□□□ -0.07
HMGCS1-202ENST00000433297 WWC1Q8IX03 1113 aa14.61□□□□□ -0.07
HMGCS1-202ENST00000433297 ADGBQ8N7X0 1667 aa14.59□□□□□ -0.07
HMGCS1-202ENST00000433297 DDX11L8A8MPP1 907 aa14.59□□□□□ -0.07
HMGCS1-202ENST00000433297 NLRP1Q9C000 1473 aa14.59□□□□□ -0.07
HMGCS1-202ENST00000433297 KDM5DQ9BY66 1539 aa14.59□□□□□ -0.07
HMGCS1-202ENST00000433297 GAS2L3Q86XJ1 694 aa14.58□□□□□ -0.07
HMGCS1-202ENST00000433297 RARSP54136 660 aaKnown RBP14.58□□□□□ -0.08
HMGCS1-202ENST00000433297 CDCA8Q53HL2 280 aa14.58□□□□□ -0.08
HMGCS1-202ENST00000433297 ARID3AQ99856 593 aa14.58□□□□□ -0.08
HMGCS1-202ENST00000433297 DNAJC5BQ9UF47 199 aa14.58□□□□□ -0.08
HMGCS1-202ENST00000433297 A2MP01023 1474 aa14.58□□□□□ -0.08
HMGCS1-202ENST00000433297 GPRASP1Q5JY77 1395 aa14.58□□□□□ -0.08
HMGCS1-202ENST00000433297 CEP170Q5SW79 1584 aa14.57□□□□□ -0.08
HMGCS1-202ENST00000433297 RBM10P98175 930 aaKnown RBP14.57□□□□□ -0.08
HMGCS1-202ENST00000433297 FTSJ3Q8IY81 847 aaKnown RBP14.57□□□□□ -0.08
HMGCS1-202ENST00000433297 DISP1Q96F81 1524 aa14.57□□□□□ -0.08
HMGCS1-202ENST00000433297 RAPGEF6Q8TEU7 1601 aa14.57□□□□□ -0.08
HMGCS1-202ENST00000433297 HSP90AB1P08238 724 aaKnown RBP14.57□□□□□ -0.08
HMGCS1-202ENST00000433297 KIAA1211Q6ZU35 1233 aa14.57□□□□□ -0.08
HMGCS1-202ENST00000433297 TRPM1Q7Z4N2 1603 aa14.56□□□□□ -0.08
HMGCS1-202ENST00000433297 TNPO1Q92973 898 aaKnown RBP14.55□□□□□ -0.08
HMGCS1-202ENST00000433297 FAM135AQ9P2D6 1515 aa14.54□□□□□ -0.08
HMGCS1-202ENST00000433297 WDR7Q9Y4E6 1490 aa14.54□□□□□ -0.08
HMGCS1-202ENST00000433297 ANP32BQ92688 251 aaKnown RBP14.53□□□□□ -0.08
HMGCS1-202ENST00000433297 TCP11L2Q8N4U5 519 aa14.53□□□□□ -0.08
HMGCS1-202ENST00000433297 CHMP7Q8WUX9 453 aaPredicted RBP14.53□□□□□ -0.08
HMGCS1-202ENST00000433297 KIAA0556O60303 1618 aa14.52□□□□□ -0.08
HMGCS1-202ENST00000433297 GBP4Q96PP9 640 aa14.52□□□□□ -0.08
HMGCS1-202ENST00000433297 ITSN2Q9NZM3 1697 aa14.52□□□□□ -0.09
HMGCS1-202ENST00000433297 TPM2P07951 284 aa14.51□□□□□ -0.09
HMGCS1-202ENST00000433297 NCLP19338 710 aaKnown RBP14.51□□□□□ -0.09
HMGCS1-202ENST00000433297 FAM13BQ9NYF5 915 aa14.51□□□□□ -0.09
HMGCS1-202ENST00000433297 MSNP26038 577 aaKnown RBP14.51□□□□□ -0.09
HMGCS1-202ENST00000433297 PDCL3Q9H2J4 239 aa14.51□□□□□ -0.09
HMGCS1-202ENST00000433297 ITPRIPQ8IWB1 547 aa14.51□□□□□ -0.09
HMGCS1-202ENST00000433297 PLA2R1Q13018 1463 aa14.5□□□□□ -0.09
HMGCS1-202ENST00000433297 PRDM15P57071 1507 aaPredicted RBP14.5□□□□□ -0.09
HMGCS1-202ENST00000433297 PTPRGP23470 1445 aa14.5□□□□□ -0.09
HMGCS1-202ENST00000433297 PIK3C2GO75747 1445 aa14.5□□□□□ -0.09
HMGCS1-202ENST00000433297 NINLQ9Y2I6 1382 aa14.5□□□□□ -0.09
HMGCS1-202ENST00000433297 NASPP49321 788 aaPredicted RBP14.49□□□□□ -0.09
HMGCS1-202ENST00000433297 MVPQ14764 893 aaKnown RBP14.49□□□□□ -0.09
HMGCS1-202ENST00000433297 EIF4G3O43432 1585 aaKnown RBP14.49□□□□□ -0.09
HMGCS1-202ENST00000433297 ASXL1Q8IXJ9 1541 aa14.49□□□□□ -0.09
HMGCS1-202ENST00000433297 MORC1Q86VD1 984 aa14.49□□□□□ -0.09
HMGCS1-202ENST00000433297 DZIP1LQ8IYY4 767 aaKnown RBP14.49□□□□□ -0.09
HMGCS1-202ENST00000433297 ZKSCAN2Q63HK3 967 aa14.48□□□□□ -0.09
HMGCS1-202ENST00000433297 CARD14Q9BXL6 1004 aa14.48□□□□□ -0.09
HMGCS1-202ENST00000433297 ADAMTS12P58397 1594 aa14.48□□□□□ -0.09
HMGCS1-202ENST00000433297 CROCC2H7BZ55 1655 aa14.48□□□□□ -0.09
HMGCS1-202ENST00000433297 ZNF692Q9BU19 519 aaPredicted RBP14.48□□□□□ -0.09
HMGCS1-202ENST00000433297 R3HCC1Q9Y3T6 440 aaKnown RBP14.48□□□□□ -0.09
HMGCS1-202ENST00000433297 LNPKQ9C0E8 428 aa14.47□□□□□ -0.09
HMGCS1-202ENST00000433297 TARBP1Q13395 1621 aaKnown RBP14.47□□□□□ -0.09
HMGCS1-202ENST00000433297 RUNDC1Q96C34 613 aa14.47□□□□□ -0.09
HMGCS1-202ENST00000433297 JPH4Q96JJ6 628 aa14.47□□□□□ -0.09
HMGCS1-202ENST00000433297 SMC4Q9NTJ3 1288 aa14.47□□□□□ -0.09
HMGCS1-202ENST00000433297 ISY1Q9ULR0 285 aaKnown RBP14.47□□□□□ -0.09
HMGCS1-202ENST00000433297 DDX49Q9Y6V7 483 aaKnown RBP14.47□□□□□ -0.09
HMGCS1-202ENST00000433297 TSR2Q969E8 191 aaKnown RBP14.47□□□□□ -0.09
HMGCS1-202ENST00000433297 ZBTB7CA1YPR0 619 aa14.46□□□□□ -0.09
HMGCS1-202ENST00000433297 SKOR2Q2VWA4 1001 aaPredicted RBP14.46□□□□□ -0.1
HMGCS1-202ENST00000433297 NGEFQ8N5V2 710 aa14.46□□□□□ -0.1
HMGCS1-202ENST00000433297 PBRM1Q86U86 1689 aa14.45□□□□□ -0.1
HMGCS1-202ENST00000433297 AAMPQ13685 434 aa14.45□□□□□ -0.1
HMGCS1-202ENST00000433297 ZSCAN30Q86W11 494 aa14.45□□□□□ -0.1
HMGCS1-202ENST00000433297 VIRMAQ69YN4 1812 aaKnown RBP14.45□□□□□ -0.1
HMGCS1-202ENST00000433297 GOLGA6L22H0YM25 854 aa14.45□□□□□ -0.1
HMGCS1-202ENST00000433297 CCDC173Q0VFZ6 552 aa14.45□□□□□ -0.1
HMGCS1-202ENST00000433297 SHANK2Q9UPX8 1470 aa14.44□□□□□ -0.1
HMGCS1-202ENST00000433297 SSFA2P28290 1259 aa14.44□□□□□ -0.1
HMGCS1-202ENST00000433297 RBM42Q9BTD8 480 aaKnown RBP14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms