RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 UGGT1Q9NYU2 1555 aa26.09■■□□□ 1.77
HMGN1-206ENST00000431390 PIP4K2BP78356 416 aa26.07■■□□□ 1.76
HMGN1-206ENST00000431390 ERVK-7P63135 1459 aa26.07■■□□□ 1.76
HMGN1-206ENST00000431390 NLRP1Q9C000 1473 aa26.07■■□□□ 1.76
HMGN1-206ENST00000431390 HSPA1LP34931 641 aa26.05■■□□□ 1.76
HMGN1-206ENST00000431390 MED1Q15648 1581 aaPredicted RBP26.05■■□□□ 1.76
HMGN1-206ENST00000431390 ANKLE2Q86XL3 938 aa26.04■■□□□ 1.76
HMGN1-206ENST00000431390 IQGAP1P46940 1657 aa26.03■■□□□ 1.76
HMGN1-206ENST00000431390 TOM1O60784 492 aa26.03■■□□□ 1.76
HMGN1-206ENST00000431390 ADGRB3O60242 1522 aa26.02■■□□□ 1.76
HMGN1-206ENST00000431390 THEMISQ8N1K5 641 aaPredicted RBP26.02■■□□□ 1.76
HMGN1-206ENST00000431390 NPHP4O75161 1426 aaPredicted RBP26.02■■□□□ 1.76
HMGN1-206ENST00000431390 MED14O60244 1454 aa26.01■■□□□ 1.75
HMGN1-206ENST00000431390 RGL3Q3MIN7 710 aa26.01■■□□□ 1.75
HMGN1-206ENST00000431390 SLC52A1Q9NWF4 448 aa26.01■■□□□ 1.75
HMGN1-206ENST00000431390 STRCP1A6NGW2 1772 aa26■■□□□ 1.75
HMGN1-206ENST00000431390 DCAF11Q8TEB1 546 aa25.99■■□□□ 1.75
HMGN1-206ENST00000431390 STAC3Q96MF2 364 aa25.99■■□□□ 1.75
HMGN1-206ENST00000431390 ALKQ9UM73 1620 aa25.98■■□□□ 1.75
HMGN1-206ENST00000431390 NBPF8Q3BBV2 869 aa25.97■■□□□ 1.75
HMGN1-206ENST00000431390 IFT172Q9UG01 1749 aa25.96■■□□□ 1.75
HMGN1-206ENST00000431390 PRAG1Q86YV5 1406 aa25.93■■□□□ 1.74
HMGN1-206ENST00000431390 KDM2AQ9Y2K7 1162 aa25.93■■□□□ 1.74
HMGN1-206ENST00000431390 IDI1Q13907 227 aa25.92■■□□□ 1.74
HMGN1-206ENST00000431390 UBR1Q8IWV7 1749 aa25.92■■□□□ 1.74
HMGN1-206ENST00000431390 TMEM131LA2VDJ0 1609 aa25.91■■□□□ 1.74
HMGN1-206ENST00000431390 RALGAPBQ86X10 1494 aa25.91■■□□□ 1.74
HMGN1-206ENST00000431390 MYOM2P54296 1465 aa25.91■■□□□ 1.74
HMGN1-206ENST00000431390 ZNF316A6NFI3 1004 aaPredicted RBP25.9■■□□□ 1.74
HMGN1-206ENST00000431390 PPLO60437 1756 aa25.89■■□□□ 1.74
HMGN1-206ENST00000431390 TRPM1Q7Z4N2 1603 aa25.89■■□□□ 1.73
HMGN1-206ENST00000431390 RPGRIP1LQ68CZ1 1315 aa25.89■■□□□ 1.73
HMGN1-206ENST00000431390 LRRC7Q96NW7 1537 aa25.88■■□□□ 1.73
HMGN1-206ENST00000431390 CHGAP10645 457 aaKnown RBP25.88■■□□□ 1.73
HMGN1-206ENST00000431390 ZNF326Q5BKZ1 582 aaKnown RBP25.88■■□□□ 1.73
HMGN1-206ENST00000431390 MYO5BQ9ULV0 1848 aa25.87■■□□□ 1.73
HMGN1-206ENST00000431390 KDM5AP29375 1690 aaKnown RBP25.84■■□□□ 1.73
HMGN1-206ENST00000431390 SENP3Q9H4L4 574 aaPredicted RBP25.83■■□□□ 1.73
HMGN1-206ENST00000431390 NEXMIFQ5QGS0 1516 aa25.83■■□□□ 1.73
HMGN1-206ENST00000431390 NRXN1Q9ULB1 1477 aa25.82■■□□□ 1.72
HMGN1-206ENST00000431390 KIAA1210Q9ULL0 1709 aa25.81■■□□□ 1.72
HMGN1-206ENST00000431390 SCAF11Q99590 1463 aaKnown RBP25.81■■□□□ 1.72
HMGN1-206ENST00000431390 XIRP1Q702N8 1843 aaKnown RBP25.8■■□□□ 1.72
HMGN1-206ENST00000431390 LAMC1P11047 1609 aa25.8■■□□□ 1.72
HMGN1-206ENST00000431390 PHF23Q9BUL5 403 aaPredicted RBP25.79■■□□□ 1.72
HMGN1-206ENST00000431390 GPRASP1Q5JY77 1395 aa25.77■■□□□ 1.72
HMGN1-206ENST00000431390 EIF4G2P78344 907 aaKnown RBP eCLIP25.77■■□□□ 1.721e-6■□□□□ 9.4
HMGN1-206ENST00000431390 STAG3Q9UJ98 1225 aa25.77■■□□□ 1.72
HMGN1-206ENST00000431390 SLIT1O75093 1534 aa25.77■■□□□ 1.72
HMGN1-206ENST00000431390 ARHGAP23Q9P227 1491 aa25.77■■□□□ 1.72
HMGN1-206ENST00000431390 ZFYVE9O95405 1425 aa25.76■■□□□ 1.71
HMGN1-206ENST00000431390 ROCK2O75116 1388 aaKnown RBP25.76■■□□□ 1.71
HMGN1-206ENST00000431390 ADGRF5Q8IZF2 1346 aa25.74■■□□□ 1.71
HMGN1-206ENST00000431390 VGFO15240 615 aaPredicted RBP25.73■■□□□ 1.71
HMGN1-206ENST00000431390 LTKP29376 864 aa25.73■■□□□ 1.71
HMGN1-206ENST00000431390 PIK3C2GO75747 1445 aa25.73■■□□□ 1.71
HMGN1-206ENST00000431390 CARD11Q9BXL7 1154 aa25.73■■□□□ 1.71
HMGN1-206ENST00000431390 HSPA5P11021 654 aaKnown RBP25.71■■□□□ 1.71
HMGN1-206ENST00000431390 TXNDC2Q86VQ3 553 aa25.71■■□□□ 1.71
HMGN1-206ENST00000431390 USP47Q96K76 1375 aa25.69■■□□□ 1.7
HMGN1-206ENST00000431390 NBPF1Q3BBV0 1214 aa25.68■■□□□ 1.7
HMGN1-206ENST00000431390 RIMS2Q9UQ26 1411 aa25.67■■□□□ 1.7
HMGN1-206ENST00000431390 SETBP1Q9Y6X0 1596 aa25.66■■□□□ 1.7
HMGN1-206ENST00000431390 EID1Q9Y6B2 187 aa25.65■■□□□ 1.7
HMGN1-206ENST00000431390 HIRIP3Q9BW71 556 aaPredicted RBP25.63■■□□□ 1.69
HMGN1-206ENST00000431390 TMEM2Q9UHN6 1383 aa25.63■■□□□ 1.69
HMGN1-206ENST00000431390 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.62■■□□□ 1.69
HMGN1-206ENST00000431390 C14orf93Q9H972 538 aaKnown RBP25.62■■□□□ 1.69
HMGN1-206ENST00000431390 HDGFP51858 240 aaKnown RBP25.61■■□□□ 1.69
HMGN1-206ENST00000431390 CFAP70Q5T0N1 1121 aa25.61■■□□□ 1.69
HMGN1-206ENST00000431390 NUTM2DQ5VT03 806 aaPredicted RBP25.6■■□□□ 1.69
HMGN1-206ENST00000431390 ADGRB1O14514 1584 aa25.58■■□□□ 1.69
HMGN1-206ENST00000431390 RGS17Q9UGC6 210 aaPredicted RBP25.56■■□□□ 1.68
HMGN1-206ENST00000431390 ROBO1Q9Y6N7 1651 aa25.55■■□□□ 1.68
HMGN1-206ENST00000431390 TMEM94Q12767 1356 aa25.54■■□□□ 1.68
HMGN1-206ENST00000431390 FAM135BQ49AJ0 1406 aa25.54■■□□□ 1.68
HMGN1-206ENST00000431390 EIF3AQ14152 1382 aaKnown RBP25.52■■□□□ 1.68
HMGN1-206ENST00000431390 ST20-MTHFSA0A0A6YYL1 179 aa25.52■■□□□ 1.68
HMGN1-206ENST00000431390 NRXN3Q9Y4C0 1643 aa25.51■■□□□ 1.67
HMGN1-206ENST00000431390 DIEXFQ68CQ4 756 aaKnown RBP25.51■■□□□ 1.67
HMGN1-206ENST00000431390 SLC26A8Q96RN1 970 aa25.51■■□□□ 1.67
HMGN1-206ENST00000431390 SETD1AO15047 1707 aaKnown RBP25.51■■□□□ 1.67
HMGN1-206ENST00000431390 KCNA6P17658 529 aa25.5■■□□□ 1.67
HMGN1-206ENST00000431390 RBM33Q96EV2 1170 aaKnown RBP25.5■■□□□ 1.67
HMGN1-206ENST00000431390 NWD1Q149M9 1564 aa25.5■■□□□ 1.67
HMGN1-206ENST00000431390 ASXL1Q8IXJ9 1541 aa25.48■■□□□ 1.67
HMGN1-206ENST00000431390 PLEKHG1Q9ULL1 1385 aa25.47■■□□□ 1.67
HMGN1-206ENST00000431390 PROSER2Q86WR7 435 aaPredicted RBP25.47■■□□□ 1.67
HMGN1-206ENST00000431390 NKTRP30414 1462 aaKnown RBP25.46■■□□□ 1.67
HMGN1-206ENST00000431390 WASHC2AQ641Q2 1341 aa25.46■■□□□ 1.67
HMGN1-206ENST00000431390 CCDC7Q96M83 1385 aa25.45■■□□□ 1.66
HMGN1-206ENST00000431390 TMEM132EQ6IEE7 984 aa25.44■■□□□ 1.66
HMGN1-206ENST00000431390 C11orf95C9JLR9 678 aaPredicted RBP25.43■■□□□ 1.66
HMGN1-206ENST00000431390 TESK2Q96S53 571 aa25.43■■□□□ 1.66
HMGN1-206ENST00000431390 ARHGEF28Q8N1W1 1705 aaKnown RBP25.42■■□□□ 1.66
HMGN1-206ENST00000431390 CHD2O14647 1828 aaKnown RBP25.42■■□□□ 1.66
HMGN1-206ENST00000431390 PHLPP1O60346 1717 aa25.42■■□□□ 1.66
HMGN1-206ENST00000431390 KIF7Q2M1P5 1343 aa25.41■■□□□ 1.66
HMGN1-206ENST00000431390 BCANQ96GW7 911 aa25.4■■□□□ 1.66
HMGN1-206ENST00000431390 YTHDC2Q9H6S0 1430 aaKnown RBP25.4■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms