RNA–Protein interactions for RNA: ENST00000430617.6

ATG4B-212, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 623 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-212ENST00000430617 NUTM2BA6NNL0 878 aaPredicted RBP16.08■□□□□ 0.16
ATG4B-212ENST00000430617 NUTM2EB1AL46 878 aaPredicted RBP16.08■□□□□ 0.16
ATG4B-212ENST00000430617 TSPY4P0CV99 314 aa16.08■□□□□ 0.16
ATG4B-212ENST00000430617 TSPY10P0CW01 314 aa16.08■□□□□ 0.16
ATG4B-212ENST00000430617 NUTM2AQ8IVF1 878 aaPredicted RBP16.08■□□□□ 0.16
ATG4B-212ENST00000430617 STAG3Q9UJ98 1225 aa16.05■□□□□ 0.16
ATG4B-212ENST00000430617 ADGRB3O60242 1522 aa16.04■□□□□ 0.16
ATG4B-212ENST00000430617 IDI1Q13907 227 aa16.04■□□□□ 0.16
ATG4B-212ENST00000430617 NHSL1Q5SYE7 1610 aa16.04■□□□□ 0.16
ATG4B-212ENST00000430617 DUOX2Q9NRD8 1548 aa16.04■□□□□ 0.16
ATG4B-212ENST00000430617 NUTM2DQ5VT03 806 aaPredicted RBP16.03■□□□□ 0.16
ATG4B-212ENST00000430617 GCC2Q8IWJ2 1684 aa16.02■□□□□ 0.16
ATG4B-212ENST00000430617 QTRT2Q9H974 415 aaKnown RBP16.01■□□□□ 0.15
ATG4B-212ENST00000430617 CROCC2H7BZ55 1655 aa16■□□□□ 0.15
ATG4B-212ENST00000430617 LOC105371045A0A1W2PR82 267 aa16■□□□□ 0.15
ATG4B-212ENST00000430617 RBM6P78332 1123 aaKnown RBP16■□□□□ 0.15
ATG4B-212ENST00000430617 ZRANB1Q9UGI0 708 aa16■□□□□ 0.15
ATG4B-212ENST00000430617 BCANQ96GW7 911 aa15.99■□□□□ 0.15
ATG4B-212ENST00000430617 NCOA3Q9Y6Q9 1424 aa15.97■□□□□ 0.15
ATG4B-212ENST00000430617 BRINP3Q76B58 766 aa15.97■□□□□ 0.15
ATG4B-212ENST00000430617 C8orf37Q96NL8 207 aa15.97■□□□□ 0.15
ATG4B-212ENST00000430617 ATAD2Q6PL18 1390 aa15.97■□□□□ 0.15
ATG4B-212ENST00000430617 ZFYVE9O95405 1425 aa15.96■□□□□ 0.15
ATG4B-212ENST00000430617 ASXL1Q8IXJ9 1541 aa15.96■□□□□ 0.15
ATG4B-212ENST00000430617 C14orf37Q86TY3 774 aa15.96■□□□□ 0.15
ATG4B-212ENST00000430617 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.96■□□□□ 0.151e-13■□□□□ 10.9
ATG4B-212ENST00000430617 SETD5Q9C0A6 1442 aa15.95■□□□□ 0.14
ATG4B-212ENST00000430617 CADPS2Q86UW7 1296 aa15.95■□□□□ 0.14
ATG4B-212ENST00000430617 PLEKHG1Q9ULL1 1385 aa15.95■□□□□ 0.14
ATG4B-212ENST00000430617 NOS1P29475 1434 aa15.94■□□□□ 0.14
ATG4B-212ENST00000430617 TMEM131LA2VDJ0 1609 aa15.94■□□□□ 0.14
ATG4B-212ENST00000430617 LMTK2Q8IWU2 1503 aa15.94■□□□□ 0.14
ATG4B-212ENST00000430617 ATF3P18847 181 aa15.93■□□□□ 0.14
ATG4B-212ENST00000430617 C19orf44Q9H6X5 657 aa15.93■□□□□ 0.14
ATG4B-212ENST00000430617 LRP5O75197 1615 aa15.93■□□□□ 0.14
ATG4B-212ENST00000430617 ERBINQ96RT1 1412 aa15.93■□□□□ 0.14
ATG4B-212ENST00000430617 KIF15Q9NS87 1388 aa15.91■□□□□ 0.14
ATG4B-212ENST00000430617 PNPLA6Q8IY17 1366 aa15.9■□□□□ 0.14
ATG4B-212ENST00000430617 BRWD3Q6RI45 1802 aa15.89■□□□□ 0.13
ATG4B-212ENST00000430617 ADAMTS13Q76LX8 1427 aa15.89■□□□□ 0.13
ATG4B-212ENST00000430617 RIMS2Q9UQ26 1411 aa15.89■□□□□ 0.13
ATG4B-212ENST00000430617 TBX22Q9Y458 520 aa15.89■□□□□ 0.13
ATG4B-212ENST00000430617 MARF1Q9Y4F3 1742 aaKnown RBP15.88■□□□□ 0.13
ATG4B-212ENST00000430617 FOXD1Q16676 465 aa15.88■□□□□ 0.13
ATG4B-212ENST00000430617 DDX17Q92841 729 aaKnown RBP15.88■□□□□ 0.13
ATG4B-212ENST00000430617 NGLY1Q96IV0 654 aa15.88■□□□□ 0.13
ATG4B-212ENST00000430617 RRP7BPQ9NSQ0 103 aa15.88■□□□□ 0.13
ATG4B-212ENST00000430617 KANK1Q14678 1352 aa15.87■□□□□ 0.13
ATG4B-212ENST00000430617 MST1RQ04912 1400 aa15.87■□□□□ 0.13
ATG4B-212ENST00000430617 XRN1Q8IZH2 1706 aaKnown RBP15.86■□□□□ 0.13
ATG4B-212ENST00000430617 ADAMTS2O95450 1211 aa15.86■□□□□ 0.13
ATG4B-212ENST00000430617 LRRC59Q96AG4 307 aaKnown RBP15.86■□□□□ 0.13
ATG4B-212ENST00000430617 PTPRUQ92729 1446 aa15.85■□□□□ 0.13
ATG4B-212ENST00000430617 NALCNQ8IZF0 1738 aa15.85■□□□□ 0.13
ATG4B-212ENST00000430617 PPP1R15AO75807 674 aaPredicted RBP15.85■□□□□ 0.13
ATG4B-212ENST00000430617 MYOM3Q5VTT5 1437 aa15.85■□□□□ 0.13
ATG4B-212ENST00000430617 TRPM2O94759 1503 aa15.84■□□□□ 0.13
ATG4B-212ENST00000430617 SLC52A1Q9NWF4 448 aa15.84■□□□□ 0.13
ATG4B-212ENST00000430617 DCCP43146 1447 aa15.84■□□□□ 0.13
ATG4B-212ENST00000430617 LAMC1P11047 1609 aa15.83■□□□□ 0.13
ATG4B-212ENST00000430617 ABCC5O15440 1437 aa15.83■□□□□ 0.12
ATG4B-212ENST00000430617 UNC13BO14795 1591 aa15.83■□□□□ 0.12
ATG4B-212ENST00000430617 CCDC125Q86Z20 511 aa15.82■□□□□ 0.12
ATG4B-212ENST00000430617 USP21Q9UK80 565 aa15.82■□□□□ 0.12
ATG4B-212ENST00000430617 ATRNO75882 1429 aa15.82■□□□□ 0.12
ATG4B-212ENST00000430617 NRXN3Q9Y4C0 1643 aa15.82■□□□□ 0.12
ATG4B-212ENST00000430617 PIK3R4Q99570 1358 aa15.81■□□□□ 0.12
ATG4B-212ENST00000430617 TRPC5Q9UL62 973 aaPredicted RBP15.8■□□□□ 0.12
ATG4B-212ENST00000430617 AMOTL2Q9Y2J4 779 aa15.8■□□□□ 0.12
ATG4B-212ENST00000430617 COL22A1Q8NFW1 1626 aaPredicted RBP15.79■□□□□ 0.12
ATG4B-212ENST00000430617 PTPN23Q9H3S7 1636 aa15.79■□□□□ 0.12
ATG4B-212ENST00000430617 RPRD2Q5VT52 1461 aaKnown RBP15.78■□□□□ 0.12
ATG4B-212ENST00000430617 HDGFP51858 240 aaKnown RBP15.77■□□□□ 0.12
ATG4B-212ENST00000430617 FNBP4Q8N3X1 1017 aaPredicted RBP15.77■□□□□ 0.12
ATG4B-212ENST00000430617 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.77■□□□□ 0.11
ATG4B-212ENST00000430617 E9PCH4 1651 aa15.76■□□□□ 0.11
ATG4B-212ENST00000430617 DEFB132Q7Z7B7 95 aa15.76■□□□□ 0.11
ATG4B-212ENST00000430617 DAPK1P53355 1430 aa15.76■□□□□ 0.11
ATG4B-212ENST00000430617 BCL9LQ86UU0 1499 aa15.75■□□□□ 0.11
ATG4B-212ENST00000430617 SPHKAPQ2M3C7 1700 aa15.74■□□□□ 0.11
ATG4B-212ENST00000430617 KANK4Q5T7N3 995 aaPredicted RBP15.74■□□□□ 0.11
ATG4B-212ENST00000430617 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.74■□□□□ 0.11
ATG4B-212ENST00000430617 BLMP54132 1417 aaPredicted RBP15.74■□□□□ 0.11
ATG4B-212ENST00000430617 PTCH1Q13635 1447 aa15.74■□□□□ 0.11
ATG4B-212ENST00000430617 GLI3P10071 1580 aa15.74■□□□□ 0.11
ATG4B-212ENST00000430617 CHGAP10645 457 aaKnown RBP15.72■□□□□ 0.11
ATG4B-212ENST00000430617 ADGRL3Q9HAR2 1447 aa15.71■□□□□ 0.11
ATG4B-212ENST00000430617 CHIC2Q9UKJ5 165 aa15.71■□□□□ 0.11
ATG4B-212ENST00000430617 C1orf167Q5SNV9 1468 aa15.7■□□□□ 0.1
ATG4B-212ENST00000430617 SOS2Q07890 1332 aaPredicted RBP15.69■□□□□ 0.1
ATG4B-212ENST00000430617 PSDA5PKW4 1024 aaPredicted RBP15.69■□□□□ 0.1
ATG4B-212ENST00000430617 ANKRD30AQ9BXX3 1397 aa15.68■□□□□ 0.1
ATG4B-212ENST00000430617 GJD4Q96KN9 370 aaPredicted RBP15.68■□□□□ 0.1
ATG4B-212ENST00000430617 IQGAP3Q86VI3 1631 aa15.68■□□□□ 0.1
ATG4B-212ENST00000430617 VPS8Q8N3P4 1428 aa15.68■□□□□ 0.1
ATG4B-212ENST00000430617 MYOM2P54296 1465 aa15.67■□□□□ 0.1
ATG4B-212ENST00000430617 HRCP23327 699 aa15.67■□□□□ 0.1
ATG4B-212ENST00000430617 METP08581 1390 aa15.66■□□□□ 0.1
ATG4B-212ENST00000430617 ORAI2Q96SN7 254 aa15.66■□□□□ 0.1
ATG4B-212ENST00000430617 RALGAPBQ86X10 1494 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms