RNA–Protein interactions for RNA: ENST00000427897.1

HSPG2-205, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-205ENST00000427897 SLC26A8Q96RN1 970 aa30.93■■■□□ 2.54
HSPG2-205ENST00000427897 TMEM131LA2VDJ0 1609 aa30.93■■■□□ 2.54
HSPG2-205ENST00000427897 RIMS2Q9UQ26 1411 aa30.91■■■□□ 2.54
HSPG2-205ENST00000427897 SLC4A1APQ9BWU0 796 aaKnown RBP30.9■■■□□ 2.54
HSPG2-205ENST00000427897 SPHKAPQ2M3C7 1700 aa30.89■■■□□ 2.54
HSPG2-205ENST00000427897 PIP4K2BP78356 416 aa30.87■■■□□ 2.53
HSPG2-205ENST00000427897 ZNF326Q5BKZ1 582 aaKnown RBP30.87■■■□□ 2.53
HSPG2-205ENST00000427897 NUTM2DQ5VT03 806 aaPredicted RBP30.86■■■□□ 2.53
HSPG2-205ENST00000427897 STRCP1A6NGW2 1772 aa30.85■■■□□ 2.53
HSPG2-205ENST00000427897 ZFYVE9O95405 1425 aa30.83■■■□□ 2.53
HSPG2-205ENST00000427897 LRRC7Q96NW7 1537 aa30.83■■■□□ 2.53
HSPG2-205ENST00000427897 PLEKHG1Q9ULL1 1385 aa30.82■■■□□ 2.52
HSPG2-205ENST00000427897 KCNA6P17658 529 aa30.81■■■□□ 2.52
HSPG2-205ENST00000427897 PROSER2Q86WR7 435 aaPredicted RBP30.78■■■□□ 2.52
HSPG2-205ENST00000427897 ACIN1Q9UKV3 1341 aaKnown RBP30.74■■■□□ 2.51
HSPG2-205ENST00000427897 TRPM2O94759 1503 aa30.73■■■□□ 2.51
HSPG2-205ENST00000427897 TBX22Q9Y458 520 aa30.73■■■□□ 2.51
HSPG2-205ENST00000427897 KIF1BO60333 1816 aa30.72■■■□□ 2.51
HSPG2-205ENST00000427897 CLTCL1P53675 1640 aa30.71■■■□□ 2.51
HSPG2-205ENST00000427897 MPHOSPH9Q99550 1183 aa30.69■■■□□ 2.5
HSPG2-205ENST00000427897 SETD5Q9C0A6 1442 aa30.69■■■□□ 2.5
HSPG2-205ENST00000427897 FOXD1Q16676 465 aa30.68■■■□□ 2.5
HSPG2-205ENST00000427897 TMEM94Q12767 1356 aa30.67■■■□□ 2.5
HSPG2-205ENST00000427897 RBM33Q96EV2 1170 aaKnown RBP30.66■■■□□ 2.5
HSPG2-205ENST00000427897 CHD2O14647 1828 aaKnown RBP30.63■■■□□ 2.49
HSPG2-205ENST00000427897 NKTRP30414 1462 aaKnown RBP30.63■■■□□ 2.49
HSPG2-205ENST00000427897 DIP2AQ14689 1571 aa30.62■■■□□ 2.49
HSPG2-205ENST00000427897 C14orf37Q86TY3 774 aa30.62■■■□□ 2.49
HSPG2-205ENST00000427897 XIRP1Q702N8 1843 aaKnown RBP30.61■■■□□ 2.49
HSPG2-205ENST00000427897 HSPA1LP34931 641 aa30.61■■■□□ 2.49
HSPG2-205ENST00000427897 NWD1Q149M9 1564 aa30.61■■■□□ 2.49
HSPG2-205ENST00000427897 ADAMTS13Q76LX8 1427 aa30.6■■■□□ 2.49
HSPG2-205ENST00000427897 VGFO15240 615 aaPredicted RBP30.59■■■□□ 2.49
HSPG2-205ENST00000427897 PIK3R4Q99570 1358 aa30.58■■■□□ 2.49
HSPG2-205ENST00000427897 CCDC144AA2RUR9 1427 aa30.57■■■□□ 2.48
HSPG2-205ENST00000427897 MSH6P52701 1360 aa30.57■■■□□ 2.48
HSPG2-205ENST00000427897 AMOTL2Q9Y2J4 779 aa30.56■■■□□ 2.48
HSPG2-205ENST00000427897 RAB3GAP2Q9H2M9 1393 aa30.55■■■□□ 2.48
HSPG2-205ENST00000427897 RPGRIP1LQ68CZ1 1315 aa30.55■■■□□ 2.48
HSPG2-205ENST00000427897 DISP3Q9P2K9 1392 aa30.54■■■□□ 2.48
HSPG2-205ENST00000427897 NEXMIFQ5QGS0 1516 aa30.54■■■□□ 2.48
HSPG2-205ENST00000427897 ALKQ9UM73 1620 aa30.53■■■□□ 2.48
HSPG2-205ENST00000427897 RGL3Q3MIN7 710 aa30.52■■■□□ 2.48
HSPG2-205ENST00000427897 SETBP1Q9Y6X0 1596 aa30.51■■■□□ 2.47
HSPG2-205ENST00000427897 NCOA3Q9Y6Q9 1424 aa30.46■■■□□ 2.47
HSPG2-205ENST00000427897 NRXN3Q9Y4C0 1643 aa30.45■■■□□ 2.47
HSPG2-205ENST00000427897 ATF3P18847 181 aa30.44■■■□□ 2.46
HSPG2-205ENST00000427897 PTPRUQ92729 1446 aa30.43■■■□□ 2.46
HSPG2-205ENST00000427897 SLAIN2Q9P270 581 aa30.43■■■□□ 2.46
HSPG2-205ENST00000427897 METP08581 1390 aa30.42■■■□□ 2.46
HSPG2-205ENST00000427897 C19orf44Q9H6X5 657 aa30.42■■■□□ 2.46
HSPG2-205ENST00000427897 FAM135BQ49AJ0 1406 aa30.4■■■□□ 2.46
HSPG2-205ENST00000427897 CADPS2Q86UW7 1296 aa30.4■■■□□ 2.46
HSPG2-205ENST00000427897 PPLO60437 1756 aa30.4■■■□□ 2.46
HSPG2-205ENST00000427897 HRCP23327 699 aa30.37■■■□□ 2.45
HSPG2-205ENST00000427897 ANKRD30BQ9BXX2 1392 aa30.35■■■□□ 2.45
HSPG2-205ENST00000427897 ROBO1Q9Y6N7 1651 aa30.35■■■□□ 2.45
HSPG2-205ENST00000427897 XRN1Q8IZH2 1706 aaKnown RBP30.33■■■□□ 2.45
HSPG2-205ENST00000427897 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.33■■■□□ 2.45
HSPG2-205ENST00000427897 SPATA31E1Q6ZUB1 1445 aa30.32■■■□□ 2.44
HSPG2-205ENST00000427897 ADGRF5Q8IZF2 1346 aa30.32■■■□□ 2.44
HSPG2-205ENST00000427897 PHF23Q9BUL5 403 aaPredicted RBP30.26■■■□□ 2.43
HSPG2-205ENST00000427897 IFT172Q9UG01 1749 aa30.24■■■□□ 2.43
HSPG2-205ENST00000427897 SETD1AO15047 1707 aaKnown RBP30.23■■■□□ 2.43
HSPG2-205ENST00000427897 STK26Q9P289 416 aa30.23■■■□□ 2.43
HSPG2-205ENST00000427897 MED1Q15648 1581 aaPredicted RBP30.23■■■□□ 2.43
HSPG2-205ENST00000427897 DCCP43146 1447 aa30.22■■■□□ 2.43
HSPG2-205ENST00000427897 PHLPP1O60346 1717 aa30.21■■■□□ 2.43
HSPG2-205ENST00000427897 PTCH1Q13635 1447 aa30.18■■■□□ 2.42
HSPG2-205ENST00000427897 ADGRL3Q9HAR2 1447 aa30.18■■■□□ 2.42
HSPG2-205ENST00000427897 ROBO2Q9HCK4 1378 aa30.17■■■□□ 2.42
HSPG2-205ENST00000427897 TMEM132EQ6IEE7 984 aa30.17■■■□□ 2.42
HSPG2-205ENST00000427897 ILDR2Q71H61 639 aa30.16■■■□□ 2.42
HSPG2-205ENST00000427897 KDM2AQ9Y2K7 1162 aa30.16■■■□□ 2.42
HSPG2-205ENST00000427897 PIK3C2GO75747 1445 aa30.14■■■□□ 2.42
HSPG2-205ENST00000427897 NALCNQ8IZF0 1738 aa30.13■■■□□ 2.41
HSPG2-205ENST00000427897 BRINP3Q76B58 766 aa30.13■■■□□ 2.41
HSPG2-205ENST00000427897 DCAF11Q8TEB1 546 aa30.12■■■□□ 2.41
HSPG2-205ENST00000427897 C14orf93Q9H972 538 aaKnown RBP30.11■■■□□ 2.41
HSPG2-205ENST00000427897 CFAP70Q5T0N1 1121 aa30.1■■■□□ 2.41
HSPG2-205ENST00000427897 LRPPRCP42704 1394 aaKnown RBP30.1■■■□□ 2.41
HSPG2-205ENST00000427897 MST1RQ04912 1400 aa30.1■■■□□ 2.41
HSPG2-205ENST00000427897 MYOM2P54296 1465 aa30.1■■■□□ 2.41
HSPG2-205ENST00000427897 DHX57Q6P158 1386 aaKnown RBP30.09■■■□□ 2.41
HSPG2-205ENST00000427897 JCADQ9P266 1359 aa30.09■■■□□ 2.41
HSPG2-205ENST00000427897 PRAG1Q86YV5 1406 aa30.07■■■□□ 2.4
HSPG2-205ENST00000427897 WAPLQ7Z5K2 1190 aa30.07■■■□□ 2.4
HSPG2-205ENST00000427897 STAC3Q96MF2 364 aa30.06■■■□□ 2.4
HSPG2-205ENST00000427897 ABCC11Q96J66 1382 aa30.05■■■□□ 2.4
HSPG2-205ENST00000427897 LAMC1P11047 1609 aa30.05■■■□□ 2.4
HSPG2-205ENST00000427897 YTHDC2Q9H6S0 1430 aaKnown RBP30.05■■■□□ 2.4
HSPG2-205ENST00000427897 ASXL1Q8IXJ9 1541 aa30.04■■■□□ 2.4
HSPG2-205ENST00000427897 AHDC1Q5TGY3 1603 aaPredicted RBP30.04■■■□□ 2.4
HSPG2-205ENST00000427897 NRXN1Q9ULB1 1477 aa30.02■■■□□ 2.4
HSPG2-205ENST00000427897 COL16A1Q07092 1604 aaPredicted RBP30.02■■■□□ 2.4
HSPG2-205ENST00000427897 C1orf167Q5SNV9 1468 aa30■■■□□ 2.39
HSPG2-205ENST00000427897 KNDC1Q76NI1 1749 aa29.99■■■□□ 2.39
HSPG2-205ENST00000427897 TECPR2O15040 1411 aa29.99■■■□□ 2.39
HSPG2-205ENST00000427897 MEX3CQ5U5Q3 659 aaKnown RBP29.98■■■□□ 2.39
HSPG2-205ENST00000427897 LRRC59Q96AG4 307 aaKnown RBP29.98■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms