RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 CFAP43Q8NDM7 1665 aa7.19□□□□□ -1.26
VTI1BP4-201ENST00000427516 A0A0U1RQG5 324 aaPredicted RBP7.19□□□□□ -1.26
VTI1BP4-201ENST00000427516 PPP1R37O75864 691 aa7.19□□□□□ -1.26
VTI1BP4-201ENST00000427516 KIF20AO95235 890 aa7.19□□□□□ -1.26
VTI1BP4-201ENST00000427516 RRP1P56182 461 aaKnown RBP7.19□□□□□ -1.26
VTI1BP4-201ENST00000427516 CENPQQ7L2Z9 268 aaPredicted RBP7.19□□□□□ -1.26
VTI1BP4-201ENST00000427516 HS6ST3Q8IZP7 471 aa7.19□□□□□ -1.26
VTI1BP4-201ENST00000427516 FAM9BQ8IZU0 186 aa7.19□□□□□ -1.26
VTI1BP4-201ENST00000427516 SMARCA4P51532 1647 aa7.19□□□□□ -1.26
VTI1BP4-201ENST00000427516 NCOA1Q15788 1441 aa7.18□□□□□ -1.26
VTI1BP4-201ENST00000427516 PRXQ9BXM0 1461 aa7.18□□□□□ -1.26
VTI1BP4-201ENST00000427516 RUSC2Q8N2Y8 1516 aa7.18□□□□□ -1.26
VTI1BP4-201ENST00000427516 FAM205CA6NFA0 338 aa7.18□□□□□ -1.26
VTI1BP4-201ENST00000427516 DDX11L8A8MPP1 907 aa7.18□□□□□ -1.26
VTI1BP4-201ENST00000427516 ESPNB1AK53 854 aa7.18□□□□□ -1.26
VTI1BP4-201ENST00000427516 CSPP1Q1MSJ5 1256 aa7.18□□□□□ -1.26
VTI1BP4-201ENST00000427516 ZNF710Q8N1W2 664 aa7.18□□□□□ -1.26
VTI1BP4-201ENST00000427516 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.18□□□□□ -1.26
VTI1BP4-201ENST00000427516 HS3ST6Q96QI5 342 aa7.18□□□□□ -1.26
VTI1BP4-201ENST00000427516 ARHGAP35Q9NRY4 1499 aa7.17□□□□□ -1.26
VTI1BP4-201ENST00000427516 KIF3CO14782 793 aa7.17□□□□□ -1.26
VTI1BP4-201ENST00000427516 GTPBP4Q9BZE4 634 aaKnown RBP7.17□□□□□ -1.26
VTI1BP4-201ENST00000427516 RRAGDQ9NQL2 400 aaPredicted RBP7.17□□□□□ -1.26
VTI1BP4-201ENST00000427516 EIF3AQ14152 1382 aaKnown RBP7.17□□□□□ -1.26
VTI1BP4-201ENST00000427516 CCDC7Q96M83 1385 aa7.17□□□□□ -1.26
VTI1BP4-201ENST00000427516 AKNAQ7Z591 1439 aa7.17□□□□□ -1.26
VTI1BP4-201ENST00000427516 MIA2Q96PC5 1412 aa7.17□□□□□ -1.26
VTI1BP4-201ENST00000427516 LETM1O95202 739 aaPredicted RBP7.16□□□□□ -1.26
VTI1BP4-201ENST00000427516 CHGAP10645 457 aaKnown RBP7.16□□□□□ -1.26
VTI1BP4-201ENST00000427516 MSNP26038 577 aaKnown RBP7.16□□□□□ -1.26
VTI1BP4-201ENST00000427516 SKOR2Q2VWA4 1001 aaPredicted RBP7.16□□□□□ -1.26
VTI1BP4-201ENST00000427516 HS1BP3Q53T59 392 aa7.16□□□□□ -1.26
VTI1BP4-201ENST00000427516 GPR153Q6NV75 609 aa7.16□□□□□ -1.26
VTI1BP4-201ENST00000427516 IPO4Q8TEX9 1081 aaKnown RBP7.16□□□□□ -1.26
VTI1BP4-201ENST00000427516 HFM1A2PYH4 1435 aa7.16□□□□□ -1.26
VTI1BP4-201ENST00000427516 LRRC9Q6ZRR7 1453 aa7.16□□□□□ -1.26
VTI1BP4-201ENST00000427516 TOP2BQ02880 1626 aa7.16□□□□□ -1.26
VTI1BP4-201ENST00000427516 C2orf72A6NCS6 295 aa7.15□□□□□ -1.26
VTI1BP4-201ENST00000427516 CDK11BP21127 795 aaKnown RBP7.15□□□□□ -1.26
VTI1BP4-201ENST00000427516 CCDC173Q0VFZ6 552 aa7.15□□□□□ -1.26
VTI1BP4-201ENST00000427516 ZSWIM6Q9HCJ5 1215 aa7.15□□□□□ -1.26
VTI1BP4-201ENST00000427516 FMN1Q68DA7 1419 aa7.15□□□□□ -1.27
VTI1BP4-201ENST00000427516 CUX1P39880 1505 aa7.15□□□□□ -1.27
VTI1BP4-201ENST00000427516 FSD2A1L4K1 749 aa7.14□□□□□ -1.27
VTI1BP4-201ENST00000427516 DYNC1I1O14576 645 aa7.14□□□□□ -1.27
VTI1BP4-201ENST00000427516 RIMBP2O15034 1052 aa7.14□□□□□ -1.27
VTI1BP4-201ENST00000427516 BRD4O60885 1362 aaPredicted RBP7.14□□□□□ -1.27
VTI1BP4-201ENST00000427516 FRAT2O75474 233 aaPredicted RBP7.14□□□□□ -1.27
VTI1BP4-201ENST00000427516 MCM5P33992 734 aa7.14□□□□□ -1.27
VTI1BP4-201ENST00000427516 NKX1-1Q15270 411 aaPredicted RBP7.14□□□□□ -1.27
VTI1BP4-201ENST00000427516 HECW1Q76N89 1606 aa7.14□□□□□ -1.27
VTI1BP4-201ENST00000427516 DCAF11Q8TEB1 546 aa7.14□□□□□ -1.27
VTI1BP4-201ENST00000427516 DNAJC5Q9H3Z4 198 aa7.14□□□□□ -1.27
VTI1BP4-201ENST00000427516 RCAN3Q9UKA8 241 aa7.14□□□□□ -1.27
VTI1BP4-201ENST00000427516 MAPK8IP3Q9UPT6 1336 aa7.14□□□□□ -1.27
VTI1BP4-201ENST00000427516 BIVM-ERCC5R4GMW8 1640 aa7.14□□□□□ -1.27
VTI1BP4-201ENST00000427516 KRTAP3-3Q9BYR6 98 aa7.13□□□□□ -1.27
VTI1BP4-201ENST00000427516 KRTAP3-2Q9BYR7 98 aa7.13□□□□□ -1.27
VTI1BP4-201ENST00000427516 PRDM4Q9UKN5 801 aa7.13□□□□□ -1.27
VTI1BP4-201ENST00000427516 VIRMAQ69YN4 1812 aaKnown RBP7.13□□□□□ -1.27
VTI1BP4-201ENST00000427516 RSPH4AQ5TD94 716 aa7.12□□□□□ -1.27
VTI1BP4-201ENST00000427516 SPNS2Q8IVW8 549 aa7.12□□□□□ -1.27
VTI1BP4-201ENST00000427516 TSPYL1Q9H0U9 437 aa7.12□□□□□ -1.27
VTI1BP4-201ENST00000427516 KIF27Q86VH2 1401 aa7.11□□□□□ -1.27
VTI1BP4-201ENST00000427516 NINLQ9Y2I6 1382 aa7.11□□□□□ -1.27
VTI1BP4-201ENST00000427516 ERBB3P21860 1342 aa7.11□□□□□ -1.27
VTI1BP4-201ENST00000427516 OFD1O75665 1012 aa7.11□□□□□ -1.27
VTI1BP4-201ENST00000427516 HSPA5P11021 654 aaKnown RBP7.11□□□□□ -1.27
VTI1BP4-201ENST00000427516 DMTNQ08495 405 aa7.11□□□□□ -1.27
VTI1BP4-201ENST00000427516 ARSIQ5FYB1 569 aa7.11□□□□□ -1.27
VTI1BP4-201ENST00000427516 KANK4Q5T7N3 995 aaPredicted RBP7.11□□□□□ -1.27
VTI1BP4-201ENST00000427516 KIAA1211Q6ZU35 1233 aa7.11□□□□□ -1.27
VTI1BP4-201ENST00000427516 ZSCAN30Q86W11 494 aa7.11□□□□□ -1.27
VTI1BP4-201ENST00000427516 TMC1Q8TDI8 760 aa7.11□□□□□ -1.27
VTI1BP4-201ENST00000427516 BBXQ8WY36 941 aaPredicted RBP7.11□□□□□ -1.27
VTI1BP4-201ENST00000427516 SIN3AQ96ST3 1273 aa7.11□□□□□ -1.27
VTI1BP4-201ENST00000427516 PTPN23Q9H3S7 1636 aa7.11□□□□□ -1.27
VTI1BP4-201ENST00000427516 FYCO1Q9BQS8 1478 aa7.11□□□□□ -1.27
VTI1BP4-201ENST00000427516 GOLGA6L22H0YM25 854 aa7.1□□□□□ -1.27
VTI1BP4-201ENST00000427516 RALBP1Q15311 655 aa7.1□□□□□ -1.27
VTI1BP4-201ENST00000427516 GRPEL1Q9HAV7 217 aa7.1□□□□□ -1.27
VTI1BP4-201ENST00000427516 NAP1L2Q9ULW6 460 aaPredicted RBP7.1□□□□□ -1.27
VTI1BP4-201ENST00000427516 AQRO60306 1485 aaKnown RBP eCLIP7.1□□□□□ -1.27
VTI1BP4-201ENST00000427516 KIF15Q9NS87 1388 aa7.09□□□□□ -1.27
VTI1BP4-201ENST00000427516 IBTKQ9P2D0 1353 aaPredicted RBP7.09□□□□□ -1.27
VTI1BP4-201ENST00000427516 XRCC6P12956 609 aaKnown RBP eCLIP7.09□□□□□ -1.27
VTI1BP4-201ENST00000427516 HMGN5P82970 282 aaKnown RBP7.09□□□□□ -1.27
VTI1BP4-201ENST00000427516 FAM50AQ14320 339 aaKnown RBP7.09□□□□□ -1.27
VTI1BP4-201ENST00000427516 KHSRPQ92945 711 aaKnown RBP eCLIP7.09□□□□□ -1.27
VTI1BP4-201ENST00000427516 GBP4Q96PP9 640 aa7.09□□□□□ -1.27
VTI1BP4-201ENST00000427516 EFCAB5A4FU69 1503 aa7.09□□□□□ -1.27
VTI1BP4-201ENST00000427516 LRPPRCP42704 1394 aaKnown RBP7.08□□□□□ -1.28
VTI1BP4-201ENST00000427516 VARS2Q5ST30 1063 aaKnown RBP7.08□□□□□ -1.28
VTI1BP4-201ENST00000427516 TMC2Q8TDI7 906 aa7.08□□□□□ -1.28
VTI1BP4-201ENST00000427516 CCDC94Q9BW85 323 aaPredicted RBP7.08□□□□□ -1.28
VTI1BP4-201ENST00000427516 CHMP5Q9NZZ3 219 aa7.08□□□□□ -1.28
VTI1BP4-201ENST00000427516 CTTNBP2Q8WZ74 1663 aa7.08□□□□□ -1.28
VTI1BP4-201ENST00000427516 GCC2Q8IWJ2 1684 aa7.07□□□□□ -1.28
VTI1BP4-201ENST00000427516 CCDC66A2RUB6 948 aa7.07□□□□□ -1.28
VTI1BP4-201ENST00000427516 SLC34A2O95436 690 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms