RNA–Protein interactions for RNA: ENST00000427497.3

AC055811.2-201, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AC055811.2, Length 1,693 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055811.2-201ENST00000427497 DIEXFQ68CQ4 756 aaKnown RBP25.54■■□□□ 1.68
AC055811.2-201ENST00000427497 SLIT1O75093 1534 aa25.51■■□□□ 1.67
AC055811.2-201ENST00000427497 CPS1P31327 1500 aa25.51■■□□□ 1.67
AC055811.2-201ENST00000427497 SYNMO15061 1565 aa25.5■■□□□ 1.67
AC055811.2-201ENST00000427497 ARHGAP23Q9P227 1491 aa25.5■■□□□ 1.67
AC055811.2-201ENST00000427497 CLTCL1P53675 1640 aa25.5■■□□□ 1.67
AC055811.2-201ENST00000427497 KDM5AP29375 1690 aaKnown RBP25.49■■□□□ 1.67
AC055811.2-201ENST00000427497 NOS1P29475 1434 aa25.49■■□□□ 1.67
AC055811.2-201ENST00000427497 SCAF11Q99590 1463 aaKnown RBP25.49■■□□□ 1.67
AC055811.2-201ENST00000427497 SPATA31E1Q6ZUB1 1445 aa25.48■■□□□ 1.67
AC055811.2-201ENST00000427497 IDI1Q13907 227 aa25.46■■□□□ 1.67
AC055811.2-201ENST00000427497 LTKP29376 864 aa25.45■■□□□ 1.67
AC055811.2-201ENST00000427497 UBAP1LF5GYI3 381 aa25.44■■□□□ 1.66
AC055811.2-201ENST00000427497 TXNDC2Q86VQ3 553 aa25.44■■□□□ 1.66
AC055811.2-201ENST00000427497 STAG3Q9UJ98 1225 aa25.44■■□□□ 1.66
AC055811.2-201ENST00000427497 TMEM2Q9UHN6 1383 aa25.43■■□□□ 1.66
AC055811.2-201ENST00000427497 STRCP1A6NGW2 1772 aa25.42■■□□□ 1.66
AC055811.2-201ENST00000427497 DCAF11Q8TEB1 546 aa25.42■■□□□ 1.66
AC055811.2-201ENST00000427497 EID1Q9Y6B2 187 aa25.42■■□□□ 1.66
AC055811.2-201ENST00000427497 RALGAPBQ86X10 1494 aa25.41■■□□□ 1.66
AC055811.2-201ENST00000427497 SLC52A1Q9NWF4 448 aa25.4■■□□□ 1.66
AC055811.2-201ENST00000427497 ADGRB3O60242 1522 aa25.4■■□□□ 1.66
AC055811.2-201ENST00000427497 RGL3Q3MIN7 710 aa25.39■■□□□ 1.65
AC055811.2-201ENST00000427497 PRAG1Q86YV5 1406 aa25.38■■□□□ 1.65
AC055811.2-201ENST00000427497 EIF4G2P78344 907 aaKnown RBP eCLIP25.36■■□□□ 1.65
AC055811.2-201ENST00000427497 KDM2AQ9Y2K7 1162 aa25.36■■□□□ 1.65
AC055811.2-201ENST00000427497 KIF1BO60333 1816 aa25.36■■□□□ 1.65
AC055811.2-201ENST00000427497 HSPA5P11021 654 aaKnown RBP25.35■■□□□ 1.65
AC055811.2-201ENST00000427497 ZNF326Q5BKZ1 582 aaKnown RBP25.35■■□□□ 1.65
AC055811.2-201ENST00000427497 HIRIP3Q9BW71 556 aaPredicted RBP25.35■■□□□ 1.65
AC055811.2-201ENST00000427497 TRPM1Q7Z4N2 1603 aa25.34■■□□□ 1.65
AC055811.2-201ENST00000427497 MYO5BQ9ULV0 1848 aa25.33■■□□□ 1.65
AC055811.2-201ENST00000427497 LRRC7Q96NW7 1537 aa25.33■■□□□ 1.65
AC055811.2-201ENST00000427497 TOM1O60784 492 aa25.31■■□□□ 1.64
AC055811.2-201ENST00000427497 STAC3Q96MF2 364 aa25.31■■□□□ 1.64
AC055811.2-201ENST00000427497 TMEM131LA2VDJ0 1609 aa25.29■■□□□ 1.64
AC055811.2-201ENST00000427497 IFT172Q9UG01 1749 aa25.27■■□□□ 1.64
AC055811.2-201ENST00000427497 ALKQ9UM73 1620 aa25.26■■□□□ 1.63
AC055811.2-201ENST00000427497 PIP4K2BP78356 416 aa25.26■■□□□ 1.63
AC055811.2-201ENST00000427497 ZFYVE9O95405 1425 aa25.25■■□□□ 1.63
AC055811.2-201ENST00000427497 LAMC1P11047 1609 aa25.25■■□□□ 1.63
AC055811.2-201ENST00000427497 SCAF1Q9H7N4 1312 aaKnown RBP25.25■■□□□ 1.63
AC055811.2-201ENST00000427497 GPRASP1Q5JY77 1395 aa25.24■■□□□ 1.63
AC055811.2-201ENST00000427497 USP47Q96K76 1375 aa25.24■■□□□ 1.63
AC055811.2-201ENST00000427497 XIRP1Q702N8 1843 aaKnown RBP25.23■■□□□ 1.63
AC055811.2-201ENST00000427497 MYOM2P54296 1465 aa25.23■■□□□ 1.63
AC055811.2-201ENST00000427497 SLC26A8Q96RN1 970 aa25.23■■□□□ 1.63
AC055811.2-201ENST00000427497 RIMS2Q9UQ26 1411 aa25.22■■□□□ 1.63
AC055811.2-201ENST00000427497 ROCK2O75116 1388 aaKnown RBP25.22■■□□□ 1.63
AC055811.2-201ENST00000427497 CARD11Q9BXL7 1154 aa25.21■■□□□ 1.63
AC055811.2-201ENST00000427497 DISP3Q9P2K9 1392 aa25.19■■□□□ 1.62
AC055811.2-201ENST00000427497 CHGAP10645 457 aaKnown RBP25.19■■□□□ 1.62
AC055811.2-201ENST00000427497 HDGFP51858 240 aaKnown RBP25.19■■□□□ 1.62
AC055811.2-201ENST00000427497 PLEKHG1Q9ULL1 1385 aa25.18■■□□□ 1.62
AC055811.2-201ENST00000427497 KCNA6P17658 529 aa25.17■■□□□ 1.62
AC055811.2-201ENST00000427497 BCANQ96GW7 911 aa25.17■■□□□ 1.62
AC055811.2-201ENST00000427497 PPLO60437 1756 aa25.17■■□□□ 1.62
AC055811.2-201ENST00000427497 KIAA1210Q9ULL0 1709 aa25.17■■□□□ 1.62
AC055811.2-201ENST00000427497 HSPA1LP34931 641 aa25.17■■□□□ 1.62
AC055811.2-201ENST00000427497 NRXN1Q9ULB1 1477 aa25.16■■□□□ 1.62
AC055811.2-201ENST00000427497 WASHC2AQ641Q2 1341 aa25.16■■□□□ 1.62
AC055811.2-201ENST00000427497 DDX10Q13206 875 aaKnown RBP25.16■■□□□ 1.62
AC055811.2-201ENST00000427497 NBPF1Q3BBV0 1214 aa25.16■■□□□ 1.62
AC055811.2-201ENST00000427497 MIER1Q8N108 512 aa25.15■■□□□ 1.62
AC055811.2-201ENST00000427497 NWD1Q149M9 1564 aa25.15■■□□□ 1.62
AC055811.2-201ENST00000427497 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.14■■□□□ 1.62
AC055811.2-201ENST00000427497 SENP3Q9H4L4 574 aaPredicted RBP25.13■■□□□ 1.61
AC055811.2-201ENST00000427497 RPGRIP1LQ68CZ1 1315 aa25.13■■□□□ 1.61
AC055811.2-201ENST00000427497 C11orf95C9JLR9 678 aaPredicted RBP25.12■■□□□ 1.61
AC055811.2-201ENST00000427497 CCDC7Q96M83 1385 aa25.11■■□□□ 1.61
AC055811.2-201ENST00000427497 CHD2O14647 1828 aaKnown RBP25.11■■□□□ 1.61
AC055811.2-201ENST00000427497 NKTRP30414 1462 aaKnown RBP25.11■■□□□ 1.61
AC055811.2-201ENST00000427497 TMEM94Q12767 1356 aa25.11■■□□□ 1.61
AC055811.2-201ENST00000427497 NUTM2DQ5VT03 806 aaPredicted RBP25.09■■□□□ 1.61
AC055811.2-201ENST00000427497 ADGRF5Q8IZF2 1346 aa25.09■■□□□ 1.61
AC055811.2-201ENST00000427497 PROSER2Q86WR7 435 aaPredicted RBP25.08■■□□□ 1.61
AC055811.2-201ENST00000427497 NEXMIFQ5QGS0 1516 aa25.08■■□□□ 1.61
AC055811.2-201ENST00000427497 TBX22Q9Y458 520 aa25.07■■□□□ 1.6
AC055811.2-201ENST00000427497 ADAMTS13Q76LX8 1427 aa25.06■■□□□ 1.6
AC055811.2-201ENST00000427497 DIP2AQ14689 1571 aa25.05■■□□□ 1.6
AC055811.2-201ENST00000427497 ST20-MTHFSA0A0A6YYL1 179 aa25.05■■□□□ 1.6
AC055811.2-201ENST00000427497 KIF7Q2M1P5 1343 aa25.05■■□□□ 1.6
AC055811.2-201ENST00000427497 RBM33Q96EV2 1170 aaKnown RBP25.04■■□□□ 1.6
AC055811.2-201ENST00000427497 PIK3C2GO75747 1445 aa25.04■■□□□ 1.6
AC055811.2-201ENST00000427497 ILDR2Q71H61 639 aa25.01■■□□□ 1.59
AC055811.2-201ENST00000427497 SETBP1Q9Y6X0 1596 aa25■■□□□ 1.59
AC055811.2-201ENST00000427497 PIK3R4Q99570 1358 aa24.99■■□□□ 1.59
AC055811.2-201ENST00000427497 CFAP70Q5T0N1 1121 aa24.98■■□□□ 1.59
AC055811.2-201ENST00000427497 NRXN3Q9Y4C0 1643 aa24.98■■□□□ 1.59
AC055811.2-201ENST00000427497 VGFO15240 615 aaPredicted RBP24.97■■□□□ 1.59
AC055811.2-201ENST00000427497 MED1Q15648 1581 aaPredicted RBP24.97■■□□□ 1.59
AC055811.2-201ENST00000427497 FAM135BQ49AJ0 1406 aa24.97■■□□□ 1.59
AC055811.2-201ENST00000427497 MSH6P52701 1360 aa24.97■■□□□ 1.59
AC055811.2-201ENST00000427497 C14orf93Q9H972 538 aaKnown RBP24.95■■□□□ 1.58
AC055811.2-201ENST00000427497 TESK2Q96S53 571 aa24.94■■□□□ 1.58
AC055811.2-201ENST00000427497 ROBO1Q9Y6N7 1651 aa24.94■■□□□ 1.58
AC055811.2-201ENST00000427497 NCOA3Q9Y6Q9 1424 aa24.93■■□□□ 1.58
AC055811.2-201ENST00000427497 ADGRB1O14514 1584 aa24.93■■□□□ 1.58
AC055811.2-201ENST00000427497 PTPRUQ92729 1446 aa24.91■■□□□ 1.58
AC055811.2-201ENST00000427497 AMOTL2Q9Y2J4 779 aa24.89■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms