RNA–Protein interactions for RNA: ENST00000427455.1

HERPUD2-205, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 672 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-205ENST00000427455 CCDC144AA2RUR9 1427 aa37.14■■■■□ 3.54
HERPUD2-205ENST00000427455 HDGFP51858 240 aaKnown RBP37.09■■■■□ 3.53
HERPUD2-205ENST00000427455 ABCF1Q8NE71 845 aaKnown RBP eCLIP37.07■■■■□ 3.52
HERPUD2-205ENST00000427455 PPP1R15AO75807 674 aaPredicted RBP37.04■■■■□ 3.52
HERPUD2-205ENST00000427455 ZNF326Q5BKZ1 582 aaKnown RBP37.03■■■■□ 3.52
HERPUD2-205ENST00000427455 LTBP4Q8N2S1 1624 aa37.03■■■■□ 3.52
HERPUD2-205ENST00000427455 PLEKHG1Q9ULL1 1385 aa37.03■■■■□ 3.52
HERPUD2-205ENST00000427455 NEXMIFQ5QGS0 1516 aa37.02■■■■□ 3.52
HERPUD2-205ENST00000427455 ZNF335Q9H4Z2 1342 aaPredicted RBP37.01■■■■□ 3.52
HERPUD2-205ENST00000427455 ANKRD30BQ9BXX2 1392 aa36.99■■■■□ 3.51
HERPUD2-205ENST00000427455 SPATA31E1Q6ZUB1 1445 aa36.96■■■■□ 3.51
HERPUD2-205ENST00000427455 NUTM2DQ5VT03 806 aaPredicted RBP36.95■■■■□ 3.51
HERPUD2-205ENST00000427455 RPGRIP1LQ68CZ1 1315 aa36.91■■■■□ 3.5
HERPUD2-205ENST00000427455 BCANQ96GW7 911 aa36.91■■■■□ 3.5
HERPUD2-205ENST00000427455 PPLO60437 1756 aa36.91■■■■□ 3.5
HERPUD2-205ENST00000427455 DIP2AQ14689 1571 aa36.9■■■■□ 3.5
HERPUD2-205ENST00000427455 CPS1P31327 1500 aa36.9■■■■□ 3.5
HERPUD2-205ENST00000427455 SLC26A8Q96RN1 970 aa36.88■■■■□ 3.49
HERPUD2-205ENST00000427455 SETBP1Q9Y6X0 1596 aa36.87■■■■□ 3.49
HERPUD2-205ENST00000427455 CERKQ8TCT0 537 aa36.87■■■■□ 3.49
HERPUD2-205ENST00000427455 ADAMTS13Q76LX8 1427 aa36.85■■■■□ 3.49
HERPUD2-205ENST00000427455 IFT172Q9UG01 1749 aa36.85■■■■□ 3.49
HERPUD2-205ENST00000427455 NRXN3Q9Y4C0 1643 aa36.85■■■■□ 3.49
HERPUD2-205ENST00000427455 STRCP1A6NGW2 1772 aa36.84■■■■□ 3.49
HERPUD2-205ENST00000427455 SENP3Q9H4L4 574 aaPredicted RBP36.84■■■■□ 3.49
HERPUD2-205ENST00000427455 IQSEC2Q5JU85 1478 aa36.82■■■■□ 3.48
HERPUD2-205ENST00000427455 VGFO15240 615 aaPredicted RBP36.81■■■■□ 3.48
HERPUD2-205ENST00000427455 RGL3Q3MIN7 710 aa36.81■■■■□ 3.48
HERPUD2-205ENST00000427455 TBX22Q9Y458 520 aa36.79■■■■□ 3.48
HERPUD2-205ENST00000427455 NWD1Q149M9 1564 aa36.78■■■■□ 3.48
HERPUD2-205ENST00000427455 DHX57Q6P158 1386 aaKnown RBP36.76■■■■□ 3.47
HERPUD2-205ENST00000427455 PIK3R4Q99570 1358 aa36.73■■■■□ 3.47
HERPUD2-205ENST00000427455 CHD2O14647 1828 aaKnown RBP36.73■■■■□ 3.47
HERPUD2-205ENST00000427455 KCNA6P17658 529 aa36.72■■■■□ 3.47
HERPUD2-205ENST00000427455 NKTRP30414 1462 aaKnown RBP36.71■■■■□ 3.47
HERPUD2-205ENST00000427455 LRRC7Q96NW7 1537 aa36.69■■■■□ 3.46
HERPUD2-205ENST00000427455 PCGF6Q9BYE7 350 aa36.69■■■■□ 3.46
HERPUD2-205ENST00000427455 MYOM2P54296 1465 aa36.69■■■■□ 3.46
HERPUD2-205ENST00000427455 SETD1AO15047 1707 aaKnown RBP36.67■■■■□ 3.46
HERPUD2-205ENST00000427455 ADGRF5Q8IZF2 1346 aa36.65■■■■□ 3.46
HERPUD2-205ENST00000427455 ALKQ9UM73 1620 aa36.65■■■■□ 3.46
HERPUD2-205ENST00000427455 PIK3C2GO75747 1445 aa36.63■■■■□ 3.45
HERPUD2-205ENST00000427455 NRXN1Q9ULB1 1477 aa36.62■■■■□ 3.45
HERPUD2-205ENST00000427455 METP08581 1390 aa36.61■■■■□ 3.45
HERPUD2-205ENST00000427455 XRN1Q8IZH2 1706 aaKnown RBP36.6■■■■□ 3.45
HERPUD2-205ENST00000427455 PTPRUQ92729 1446 aa36.59■■■■□ 3.45
HERPUD2-205ENST00000427455 FBXO41Q8TF61 875 aa36.59■■■■□ 3.45
HERPUD2-205ENST00000427455 XIRP1Q702N8 1843 aaKnown RBP36.57■■■■□ 3.45
HERPUD2-205ENST00000427455 LAMC1P11047 1609 aa36.54■■■■□ 3.44
HERPUD2-205ENST00000427455 TMEM94Q12767 1356 aa36.53■■■■□ 3.44
HERPUD2-205ENST00000427455 PROSER2Q86WR7 435 aaPredicted RBP36.53■■■■□ 3.44
HERPUD2-205ENST00000427455 AMOTL2Q9Y2J4 779 aa36.53■■■■□ 3.44
HERPUD2-205ENST00000427455 STAC3Q96MF2 364 aa36.52■■■■□ 3.44
HERPUD2-205ENST00000427455 DCAF11Q8TEB1 546 aa36.51■■■■□ 3.44
HERPUD2-205ENST00000427455 SIN3AQ96ST3 1273 aa36.48■■■■□ 3.43
HERPUD2-205ENST00000427455 ASXL1Q8IXJ9 1541 aa36.46■■■■□ 3.43
HERPUD2-205ENST00000427455 PRAG1Q86YV5 1406 aa36.46■■■■□ 3.43
HERPUD2-205ENST00000427455 KDM2AQ9Y2K7 1162 aa36.45■■■■□ 3.43
HERPUD2-205ENST00000427455 NCOA3Q9Y6Q9 1424 aa36.44■■■■□ 3.42
HERPUD2-205ENST00000427455 PTCH1Q13635 1447 aa36.43■■■■□ 3.42
HERPUD2-205ENST00000427455 UBAP1LF5GYI3 381 aa36.43■■■■□ 3.42
HERPUD2-205ENST00000427455 ILDR1Q86SU0 546 aaPredicted RBP36.43■■■■□ 3.42
HERPUD2-205ENST00000427455 C14orf93Q9H972 538 aaKnown RBP36.43■■■■□ 3.42
HERPUD2-205ENST00000427455 NEUROD1Q13562 356 aa36.41■■■■□ 3.42
HERPUD2-205ENST00000427455 RBM33Q96EV2 1170 aaKnown RBP36.41■■■■□ 3.42
HERPUD2-205ENST00000427455 TOM1O60784 492 aa36.38■■■■□ 3.41
HERPUD2-205ENST00000427455 CFAP70Q5T0N1 1121 aa36.38■■■■□ 3.41
HERPUD2-205ENST00000427455 MSH6P52701 1360 aa36.37■■■■□ 3.41
HERPUD2-205ENST00000427455 KNDC1Q76NI1 1749 aa36.37■■■■□ 3.41
HERPUD2-205ENST00000427455 LRPPRCP42704 1394 aaKnown RBP36.36■■■■□ 3.41
HERPUD2-205ENST00000427455 TECPR2O15040 1411 aa36.34■■■■□ 3.41
HERPUD2-205ENST00000427455 YTHDC2Q9H6S0 1430 aaKnown RBP36.34■■■■□ 3.41
HERPUD2-205ENST00000427455 ROBO2Q9HCK4 1378 aa36.33■■■■□ 3.41
HERPUD2-205ENST00000427455 TMEM132EQ6IEE7 984 aa36.33■■■■□ 3.41
HERPUD2-205ENST00000427455 L3MBTL2Q969R5 705 aa36.33■■■■□ 3.41
HERPUD2-205ENST00000427455 ADGRB1O14514 1584 aa36.32■■■■□ 3.4
HERPUD2-205ENST00000427455 C14orf37Q86TY3 774 aa36.31■■■■□ 3.4
HERPUD2-205ENST00000427455 ABCC11Q96J66 1382 aa36.3■■■■□ 3.4
HERPUD2-205ENST00000427455 KIAA1210Q9ULL0 1709 aa36.29■■■■□ 3.4
HERPUD2-205ENST00000427455 SIPA1L2Q9P2F8 1722 aaPredicted RBP36.28■■■■□ 3.4
HERPUD2-205ENST00000427455 ADGRL3Q9HAR2 1447 aa36.26■■■■□ 3.4
HERPUD2-205ENST00000427455 NALCNQ8IZF0 1738 aa36.26■■■■□ 3.4
HERPUD2-205ENST00000427455 STK26Q9P289 416 aa36.26■■■■□ 3.4
HERPUD2-205ENST00000427455 C19orf44Q9H6X5 657 aa36.25■■■■□ 3.39
HERPUD2-205ENST00000427455 DCCP43146 1447 aa36.25■■■■□ 3.39
HERPUD2-205ENST00000427455 CLSPNQ9HAW4 1339 aa36.24■■■■□ 3.39
HERPUD2-205ENST00000427455 TONSLQ96HA7 1378 aa36.24■■■■□ 3.39
HERPUD2-205ENST00000427455 PIP4K2BP78356 416 aa36.22■■■■□ 3.39
HERPUD2-205ENST00000427455 SCAF1Q9H7N4 1312 aaKnown RBP36.21■■■■□ 3.39
HERPUD2-205ENST00000427455 DLC1Q96QB1 1528 aa36.2■■■■□ 3.39
HERPUD2-205ENST00000427455 FAM135BQ49AJ0 1406 aa36.2■■■■□ 3.39
HERPUD2-205ENST00000427455 CADPS2Q86UW7 1296 aa36.18■■■■□ 3.38
HERPUD2-205ENST00000427455 ATF3P18847 181 aa36.17■■■■□ 3.38
HERPUD2-205ENST00000427455 SIRT1Q96EB6 747 aa36.16■■■■□ 3.38
HERPUD2-205ENST00000427455 TRPM1Q7Z4N2 1603 aa36.13■■■■□ 3.37
HERPUD2-205ENST00000427455 PLEKHH1Q9ULM0 1364 aa36.12■■■■□ 3.37
HERPUD2-205ENST00000427455 WAPLQ7Z5K2 1190 aa36.11■■■■□ 3.37
HERPUD2-205ENST00000427455 CDC42BPGQ6DT37 1551 aa36.1■■■■□ 3.37
HERPUD2-205ENST00000427455 SLAIN2Q9P270 581 aa36.1■■■■□ 3.37
HERPUD2-205ENST00000427455 ROBO1Q9Y6N7 1651 aa36.1■■■■□ 3.37
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms