RNA–Protein interactions for RNA: ENST00000427415.1

SDHAP1-204, Transcript of succinate dehydrogenase complex flavoprotein subunit A pseudogene 1, humanhuman

TSL 4 BASIC

Gene SDHAP1, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAP1-204ENST00000427415 LTKP29376 864 aa33.36■■■□□ 2.93
SDHAP1-204ENST00000427415 HDGFP51858 240 aaKnown RBP33.35■■■□□ 2.93
SDHAP1-204ENST00000427415 ABCF1Q8NE71 845 aaKnown RBP eCLIP33.31■■■□□ 2.92
SDHAP1-204ENST00000427415 PPP1R15AO75807 674 aaPredicted RBP33.29■■■□□ 2.92
SDHAP1-204ENST00000427415 ZNF326Q5BKZ1 582 aaKnown RBP33.29■■■□□ 2.92
SDHAP1-204ENST00000427415 PLEKHG1Q9ULL1 1385 aa33.24■■■□□ 2.91
SDHAP1-204ENST00000427415 NEXMIFQ5QGS0 1516 aa33.23■■■□□ 2.91
SDHAP1-204ENST00000427415 ANKRD30BQ9BXX2 1392 aa33.21■■■□□ 2.91
SDHAP1-204ENST00000427415 ZNF335Q9H4Z2 1342 aaPredicted RBP33.2■■■□□ 2.91
SDHAP1-204ENST00000427415 LTBP4Q8N2S1 1624 aa33.2■■■□□ 2.9
SDHAP1-204ENST00000427415 PPLO60437 1756 aa33.19■■■□□ 2.9
SDHAP1-204ENST00000427415 BCANQ96GW7 911 aa33.18■■■□□ 2.9
SDHAP1-204ENST00000427415 NUTM2DQ5VT03 806 aaPredicted RBP33.17■■■□□ 2.9
SDHAP1-204ENST00000427415 SPATA31E1Q6ZUB1 1445 aa33.17■■■□□ 2.9
SDHAP1-204ENST00000427415 RPGRIP1LQ68CZ1 1315 aa33.16■■■□□ 2.9
SDHAP1-204ENST00000427415 DIP2AQ14689 1571 aa33.14■■■□□ 2.9
SDHAP1-204ENST00000427415 IFT172Q9UG01 1749 aa33.12■■■□□ 2.89
SDHAP1-204ENST00000427415 CPS1P31327 1500 aa33.12■■■□□ 2.89
SDHAP1-204ENST00000427415 SETBP1Q9Y6X0 1596 aa33.11■■■□□ 2.89
SDHAP1-204ENST00000427415 SLC26A8Q96RN1 970 aa33.1■■■□□ 2.89
SDHAP1-204ENST00000427415 STRCP1A6NGW2 1772 aa33.09■■■□□ 2.89
SDHAP1-204ENST00000427415 CERKQ8TCT0 537 aa33.08■■■□□ 2.89
SDHAP1-204ENST00000427415 NRXN3Q9Y4C0 1643 aa33.08■■■□□ 2.89
SDHAP1-204ENST00000427415 VGFO15240 615 aaPredicted RBP33.07■■■□□ 2.88
SDHAP1-204ENST00000427415 RGL3Q3MIN7 710 aa33.07■■■□□ 2.88
SDHAP1-204ENST00000427415 SENP3Q9H4L4 574 aaPredicted RBP33.07■■■□□ 2.88
SDHAP1-204ENST00000427415 ADAMTS13Q76LX8 1427 aa33.06■■■□□ 2.88
SDHAP1-204ENST00000427415 TBX22Q9Y458 520 aa33.03■■■□□ 2.88
SDHAP1-204ENST00000427415 IQSEC2Q5JU85 1478 aa33.03■■■□□ 2.88
SDHAP1-204ENST00000427415 CHD2O14647 1828 aaKnown RBP33.02■■■□□ 2.88
SDHAP1-204ENST00000427415 DHX57Q6P158 1386 aaKnown RBP33.02■■■□□ 2.88
SDHAP1-204ENST00000427415 NWD1Q149M9 1564 aa33.01■■■□□ 2.88
SDHAP1-204ENST00000427415 PCGF6Q9BYE7 350 aa33.01■■■□□ 2.87
SDHAP1-204ENST00000427415 PIK3R4Q99570 1358 aa32.98■■■□□ 2.87
SDHAP1-204ENST00000427415 KCNA6P17658 529 aa32.97■■■□□ 2.87
SDHAP1-204ENST00000427415 MYOM2P54296 1465 aa32.95■■■□□ 2.87
SDHAP1-204ENST00000427415 NKTRP30414 1462 aaKnown RBP32.94■■■□□ 2.86
SDHAP1-204ENST00000427415 SETD1AO15047 1707 aaKnown RBP32.94■■■□□ 2.86
SDHAP1-204ENST00000427415 ALKQ9UM73 1620 aa32.92■■■□□ 2.86
SDHAP1-204ENST00000427415 LRRC7Q96NW7 1537 aa32.92■■■□□ 2.86
SDHAP1-204ENST00000427415 ADGRF5Q8IZF2 1346 aa32.91■■■□□ 2.86
SDHAP1-204ENST00000427415 PIK3C2GO75747 1445 aa32.88■■■□□ 2.85
SDHAP1-204ENST00000427415 NRXN1Q9ULB1 1477 aa32.86■■■□□ 2.85
SDHAP1-204ENST00000427415 XIRP1Q702N8 1843 aaKnown RBP32.86■■■□□ 2.85
SDHAP1-204ENST00000427415 XRN1Q8IZH2 1706 aaKnown RBP32.86■■■□□ 2.85
SDHAP1-204ENST00000427415 METP08581 1390 aa32.85■■■□□ 2.85
SDHAP1-204ENST00000427415 LAMC1P11047 1609 aa32.85■■■□□ 2.85
SDHAP1-204ENST00000427415 STAC3Q96MF2 364 aa32.84■■■□□ 2.85
SDHAP1-204ENST00000427415 PTPRUQ92729 1446 aa32.83■■■□□ 2.85
SDHAP1-204ENST00000427415 PROSER2Q86WR7 435 aaPredicted RBP32.81■■■□□ 2.84
SDHAP1-204ENST00000427415 DCAF11Q8TEB1 546 aa32.81■■■□□ 2.84
SDHAP1-204ENST00000427415 FBXO41Q8TF61 875 aa32.81■■■□□ 2.84
SDHAP1-204ENST00000427415 AMOTL2Q9Y2J4 779 aa32.8■■■□□ 2.84
SDHAP1-204ENST00000427415 TMEM94Q12767 1356 aa32.79■■■□□ 2.84
SDHAP1-204ENST00000427415 SIN3AQ96ST3 1273 aa32.76■■■□□ 2.83
SDHAP1-204ENST00000427415 KDM2AQ9Y2K7 1162 aa32.76■■■□□ 2.83
SDHAP1-204ENST00000427415 NEUROD1Q13562 356 aa32.73■■■□□ 2.83
SDHAP1-204ENST00000427415 NCOA3Q9Y6Q9 1424 aa32.72■■■□□ 2.83
SDHAP1-204ENST00000427415 ASXL1Q8IXJ9 1541 aa32.72■■■□□ 2.83
SDHAP1-204ENST00000427415 PRAG1Q86YV5 1406 aa32.71■■■□□ 2.83
SDHAP1-204ENST00000427415 C14orf93Q9H972 538 aaKnown RBP32.71■■■□□ 2.83
SDHAP1-204ENST00000427415 PTCH1Q13635 1447 aa32.7■■■□□ 2.83
SDHAP1-204ENST00000427415 UBAP1LF5GYI3 381 aa32.7■■■□□ 2.83
SDHAP1-204ENST00000427415 KNDC1Q76NI1 1749 aa32.69■■■□□ 2.82
SDHAP1-204ENST00000427415 TOM1O60784 492 aa32.67■■■□□ 2.82
SDHAP1-204ENST00000427415 RBM33Q96EV2 1170 aaKnown RBP32.67■■■□□ 2.82
SDHAP1-204ENST00000427415 CFAP70Q5T0N1 1121 aa32.66■■■□□ 2.82
SDHAP1-204ENST00000427415 MSH6P52701 1360 aa32.66■■■□□ 2.82
SDHAP1-204ENST00000427415 KIAA1210Q9ULL0 1709 aa32.65■■■□□ 2.82
SDHAP1-204ENST00000427415 LRPPRCP42704 1394 aaKnown RBP32.64■■■□□ 2.82
SDHAP1-204ENST00000427415 ILDR1Q86SU0 546 aaPredicted RBP32.64■■■□□ 2.82
SDHAP1-204ENST00000427415 C14orf37Q86TY3 774 aa32.63■■■□□ 2.81
SDHAP1-204ENST00000427415 L3MBTL2Q969R5 705 aa32.63■■■□□ 2.81
SDHAP1-204ENST00000427415 TECPR2O15040 1411 aa32.62■■■□□ 2.81
SDHAP1-204ENST00000427415 YTHDC2Q9H6S0 1430 aaKnown RBP32.62■■■□□ 2.81
SDHAP1-204ENST00000427415 TMEM132EQ6IEE7 984 aa32.62■■■□□ 2.81
SDHAP1-204ENST00000427415 ADGRB1O14514 1584 aa32.6■■■□□ 2.81
SDHAP1-204ENST00000427415 SIPA1L2Q9P2F8 1722 aaPredicted RBP32.6■■■□□ 2.81
SDHAP1-204ENST00000427415 ABCC11Q96J66 1382 aa32.59■■■□□ 2.81
SDHAP1-204ENST00000427415 ROBO2Q9HCK4 1378 aa32.59■■■□□ 2.81
SDHAP1-204ENST00000427415 TONSLQ96HA7 1378 aa32.58■■■□□ 2.81
SDHAP1-204ENST00000427415 CLSPNQ9HAW4 1339 aa32.58■■■□□ 2.81
SDHAP1-204ENST00000427415 STK26Q9P289 416 aa32.58■■■□□ 2.81
SDHAP1-204ENST00000427415 NALCNQ8IZF0 1738 aa32.57■■■□□ 2.81
SDHAP1-204ENST00000427415 ADGRL3Q9HAR2 1447 aa32.55■■■□□ 2.8
SDHAP1-204ENST00000427415 C19orf44Q9H6X5 657 aa32.55■■■□□ 2.8
SDHAP1-204ENST00000427415 DCCP43146 1447 aa32.54■■■□□ 2.8
SDHAP1-204ENST00000427415 SCAF1Q9H7N4 1312 aaKnown RBP32.52■■■□□ 2.8
SDHAP1-204ENST00000427415 DLC1Q96QB1 1528 aa32.51■■■□□ 2.8
SDHAP1-204ENST00000427415 PIP4K2BP78356 416 aa32.51■■■□□ 2.79
SDHAP1-204ENST00000427415 FAM135BQ49AJ0 1406 aa32.5■■■□□ 2.79
SDHAP1-204ENST00000427415 CADPS2Q86UW7 1296 aa32.49■■■□□ 2.79
SDHAP1-204ENST00000427415 ATF3P18847 181 aa32.48■■■□□ 2.79
SDHAP1-204ENST00000427415 CCER1Q8TC90 406 aaPredicted RBP32.48■■■□□ 2.79
SDHAP1-204ENST00000427415 TRPM1Q7Z4N2 1603 aa32.48■■■□□ 2.79
SDHAP1-204ENST00000427415 SIRT1Q96EB6 747 aa32.47■■■□□ 2.79
SDHAP1-204ENST00000427415 ARHGEF28Q8N1W1 1705 aaKnown RBP32.43■■■□□ 2.78
SDHAP1-204ENST00000427415 CDC42BPGQ6DT37 1551 aa32.42■■■□□ 2.78
SDHAP1-204ENST00000427415 WAPLQ7Z5K2 1190 aa32.42■■■□□ 2.78
SDHAP1-204ENST00000427415 ROBO1Q9Y6N7 1651 aa32.41■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms